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The map label for this gene is yciH [H]

Identifier: 78224002

GI number: 78224002

Start: 3168852

End: 3169217

Strand: Reverse

Name: yciH [H]

Synonym: Gmet_2806

Alternate gene names: 78224002

Gene position: 3169217-3168852 (Counterclockwise)

Preceding gene: 78224003

Following gene: 78224001

Centisome position: 79.28

GC content: 68.85

Gene sequence:

>366_bases
ATGAAAAAGGGATCATCCTCGGACGCACCCCTGGTCTGGTCATCGGAGCACGGGAGGGTCTGCCCCGGCTGCGGCAAGCC
GGCGGCAGGGTGCGTCTGCAAAAAGCAGCAGAAGAGCCCGGCCGGCGACGGCATCGTCCGGGTCCGGCGCGAGTCCAAGG
GGCGTGGCGGCAAGACCGTGACGGTCATCACTGGCGTTCCCCTGGGGAGCGACGGGATCGCTGCCCTGGCCGGCGAGCTC
AAGCGCCGCTGCGGCACCGGCGGCACGGTGAAGGAGGGGAACATCGAGATCCAGGGGGACCACGCCGATCTCCTGGTGGC
GGAACTGACAAAGTGGGGCTACACCGTGAAGCGGGCAGGGGGGTAG

Upstream 100 bases:

>100_bases
GAGGCGATCATCACCGAGATCAGGGGAGTGACCGCCATCCGGGAGCTGGACCCCGCCTCGGGGATGGTGCTGCTGAAGGT
GTGATATCAACGGAGGAGCC

Downstream 100 bases:

>100_bases
GATGAGGCGCTGGATCGTCCTTGCGGCTGCGACCCTGCGGCCGGCGCCGCTTACCGCTGGGGAGGAGGCGCCGTGAATCC
TTACCGCATCGGCATAGACC

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKKGSSSDAPLVWSSEHGRVCPGCGKPAAGCVCKKQQKSPAGDGIVRVRRESKGRGGKTVTVITGVPLGSDGIAALAGEL
KRRCGTGGTVKEGNIEIQGDHADLLVAELTKWGYTVKRAGG

Sequences:

>Translated_121_residues
MKKGSSSDAPLVWSSEHGRVCPGCGKPAAGCVCKKQQKSPAGDGIVRVRRESKGRGGKTVTVITGVPLGSDGIAALAGEL
KRRCGTGGTVKEGNIEIQGDHADLLVAELTKWGYTVKRAGG
>Mature_121_residues
MKKGSSSDAPLVWSSEHGRVCPGCGKPAAGCVCKKQQKSPAGDGIVRVRRESKGRGGKTVTVITGVPLGSDGIAALAGEL
KRRCGTGGTVKEGNIEIQGDHADLLVAELTKWGYTVKRAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=117, Percent_Identity=47.8632478632479, Blast_Score=93, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12415; Mature: 12415

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGSSSDAPLVWSSEHGRVCPGCGKPAAGCVCKKQQKSPAGDGIVRVRRESKGRGGKTV
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEE
TVITGVPLGSDGIAALAGELKRRCGTGGTVKEGNIEIQGDHADLLVAELTKWGYTVKRAG
EEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHHHHHCCEEEEECC
G
C
>Mature Secondary Structure
MKKGSSSDAPLVWSSEHGRVCPGCGKPAAGCVCKKQQKSPAGDGIVRVRRESKGRGGKTV
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEE
TVITGVPLGSDGIAALAGELKRRCGTGGTVKEGNIEIQGDHADLLVAELTKWGYTVKRAG
EEEECCCCCCCCHHHHHHHHHHHCCCCCCEECCCEEEECCCHHHHHHHHHHCCEEEEECC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]