Click here to switch to the map view.

The map label for this gene is 78223990

Identifier: 78223990

GI number: 78223990

Start: 3158194

End: 3159192

Strand: Reverse

Name: 78223990

Synonym: Gmet_2794

Alternate gene names: NA

Gene position: 3159192-3158194 (Counterclockwise)

Preceding gene: 78223991

Following gene: 78223989

Centisome position: 79.03

GC content: 60.66

Gene sequence:

>999_bases
ATGGAAAAGTCTATCACGTATGTCGGGCTTGATGTTCACAAGAACTCCATCGAAATAGCTCTTGCCGATTGGGGGCGAGA
CAATGAAGTCCGCCACTATGGAAGCGTCGGTGGCGACCTGCACTCCTTGGACAAAGTCGTGCGGAAGCTGGTCTCCCAAG
GACGCGAGCTTCATTTTGTGTACGAAGCCGGGCCATGCGGCTATGAGATTTATCGTCACCTGACCCGACAGGGGTTCGAC
TGCATCGTGGTTGCGCCGTCGCTGATCCCGAAGAAGAGCGGCAACCGGATCAAGAACGACCGACGGGATGCCGAGATGCT
GGCCCGTTTGCACCGGGCTGGCGAACTGACGCCGGTCTACGTGCCTCACGTTGAGGACGAAGCGATGCGGGACCTCTCCC
GTGCCCGAGAGGATGCCAAGAGCGCGGAACGCAAAGCGCGGCAGCAGCTCAATGCATTCCTGTTGCGCAGCGGGGTTCGC
TACAGCGGCAAAACCCTATGGAGCCTCGCCCACTGGCGCTGGATCTCTGACATTAAAATGCCGCACCCGGCCCAGCAGAT
CACGCTCCAGGAATACGTCGATGCGGTGAGGGCCTGTAGCGAACGCATCGATCGCTTCACAGAGCAGATTCGGCAGCTCG
TCACGCAGTGGCGCGTTGGTCCGGTGGTTGAAGCACTCCAAGCATTGCGCGGTGTCTCTCTGGTGGTTGCCGTGACGACC
GTCGCGGAACTCGGTGACTTGAGCCGATTCGATCACCCCCGGCAGTTAATGGCCTATCTCGGGCTTGTCCCCTCGGAGCA
TTCGAGCGGCGAAACAACCAAGCGGGGAGGGATTACAAAGACCGGCAACAGCCATGCCCGACGGATGCTGGTGGAAGCTG
CCTGGTCGTACCGGCTCCCTGCCAGGGTGAGCCGACGACTCCGAGATCGGCAACAGAGTCTCCCGCAACCGGTGTGGGGG
AGTTCCGGGGACGGGGAGTTCCGGGGACACCATACCTAA

Upstream 100 bases:

>100_bases
GGCTGACAGTAGAAAGTAAAAGACCTGCCCCTTGCGGAAACGTGGGTTATGCTGGAGATGGGAAACCACCAGTACAGAGC
CACAACCAAGGAGGCAGGTC

Downstream 100 bases:

>100_bases
TTCAACTGAGATAAGTATGGTGTCCCCTGAATTCCTGTCTGAATTCCGTGAGTATGGTGTCCCCTGAATTCCATTCATCT
GTAAGGAGATTTCCCGAAAT

Product: IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MEKSITYVGLDVHKNSIEIALADWGRDNEVRHYGSVGGDLHSLDKVVRKLVSQGRELHFVYEAGPCGYEIYRHLTRQGFD
CIVVAPSLIPKKSGNRIKNDRRDAEMLARLHRAGELTPVYVPHVEDEAMRDLSRAREDAKSAERKARQQLNAFLLRSGVR
YSGKTLWSLAHWRWISDIKMPHPAQQITLQEYVDAVRACSERIDRFTEQIRQLVTQWRVGPVVEALQALRGVSLVVAVTT
VAELGDLSRFDHPRQLMAYLGLVPSEHSSGETTKRGGITKTGNSHARRMLVEAAWSYRLPARVSRRLRDRQQSLPQPVWG
SSGDGEFRGHHT

Sequences:

>Translated_332_residues
MEKSITYVGLDVHKNSIEIALADWGRDNEVRHYGSVGGDLHSLDKVVRKLVSQGRELHFVYEAGPCGYEIYRHLTRQGFD
CIVVAPSLIPKKSGNRIKNDRRDAEMLARLHRAGELTPVYVPHVEDEAMRDLSRAREDAKSAERKARQQLNAFLLRSGVR
YSGKTLWSLAHWRWISDIKMPHPAQQITLQEYVDAVRACSERIDRFTEQIRQLVTQWRVGPVVEALQALRGVSLVVAVTT
VAELGDLSRFDHPRQLMAYLGLVPSEHSSGETTKRGGITKTGNSHARRMLVEAAWSYRLPARVSRRLRDRQQSLPQPVWG
SSGDGEFRGHHT
>Mature_332_residues
MEKSITYVGLDVHKNSIEIALADWGRDNEVRHYGSVGGDLHSLDKVVRKLVSQGRELHFVYEAGPCGYEIYRHLTRQGFD
CIVVAPSLIPKKSGNRIKNDRRDAEMLARLHRAGELTPVYVPHVEDEAMRDLSRAREDAKSAERKARQQLNAFLLRSGVR
YSGKTLWSLAHWRWISDIKMPHPAQQITLQEYVDAVRACSERIDRFTEQIRQLVTQWRVGPVVEALQALRGVSLVVAVTT
VAELGDLSRFDHPRQLMAYLGLVPSEHSSGETTKRGGITKTGNSHARRMLVEAAWSYRLPARVSRRLRDRQQSLPQPVWG
SSGDGEFRGHHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37671; Mature: 37671

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSITYVGLDVHKNSIEIALADWGRDNEVRHYGSVGGDLHSLDKVVRKLVSQGRELHFV
CCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE
YEAGPCGYEIYRHLTRQGFDCIVVAPSLIPKKSGNRIKNDRRDAEMLARLHRAGELTPVY
EECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
VPHVEDEAMRDLSRAREDAKSAERKARQQLNAFLLRSGVRYSGKTLWSLAHWRWISDIKM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PHPAQQITLQEYVDAVRACSERIDRFTEQIRQLVTQWRVGPVVEALQALRGVSLVVAVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
VAELGDLSRFDHPRQLMAYLGLVPSEHSSGETTKRGGITKTGNSHARRMLVEAAWSYRLP
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCC
ARVSRRLRDRQQSLPQPVWGSSGDGEFRGHHT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKSITYVGLDVHKNSIEIALADWGRDNEVRHYGSVGGDLHSLDKVVRKLVSQGRELHFV
CCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEE
YEAGPCGYEIYRHLTRQGFDCIVVAPSLIPKKSGNRIKNDRRDAEMLARLHRAGELTPVY
EECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
VPHVEDEAMRDLSRAREDAKSAERKARQQLNAFLLRSGVRYSGKTLWSLAHWRWISDIKM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PHPAQQITLQEYVDAVRACSERIDRFTEQIRQLVTQWRVGPVVEALQALRGVSLVVAVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
VAELGDLSRFDHPRQLMAYLGLVPSEHSSGETTKRGGITKTGNSHARRMLVEAAWSYRLP
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCC
ARVSRRLRDRQQSLPQPVWGSSGDGEFRGHHT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]