| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is yjhP [H]
Identifier: 78223989
GI number: 78223989
Start: 3157349
End: 3158095
Strand: Reverse
Name: yjhP [H]
Synonym: Gmet_2793
Alternate gene names: 78223989
Gene position: 3158095-3157349 (Counterclockwise)
Preceding gene: 78223990
Following gene: 78223988
Centisome position: 79.0
GC content: 58.5
Gene sequence:
>747_bases ATGGACATACCTCGGATCTTCAACATAACCGAAAGTGCTCACCGCATCCATAACCCGTTCACACCAGAAAAGTTCGCCAC TCTCGGCGCGGCGTTGCGTCTGGAAACGGGGGCCCACTTGCTCGATCTCGGCAGCGGTTCGGGAGAGATGCTATGCACCT GGGCACGCGATCACGGTGTCATCGGCACCGGCATCGACATGAGCCGGTTGTTCACCGAACAAGCGAAACTCCGTGCTGTA GAACTTGGCGTCGCCGATCAAGTCAAGTTCATCCATGGCGATGCTGTCGGTTACGTCTCCGACGAGAAGGTCGGTGTGGC AGCCTGTGTCGGGGCCACTTGGATCGGCGGGGGAGTCGCCGGCACTATCGAGCTTCTGGCGCGGAGCCTGCGCACCGGAG GGATTATCCTCATCGGCGAGCCCTACTGGCGGCAATTACCGCCGACGGAAGATGTTGCCAAGGGGTGTCTTGCCAATTCA ATCTCCGACTTCCTCATGCTTCCTGAACTTATCGCGTCTTTCGGCCACCTTGGCTATGATGTCGTTGAAATGGTTCTGGC TGACCAAGACGGCTGGGACAGATACGAGGCGGCCAAATGGCTCACCATGCGCCGATGGCTTGAAGCCAATCCCGACGACG AGTTAGCGAAAGAGGTTCGAGCCCAACTGACCTCAGAACCCGAGCGCTACACCGCTTACACGCGTGAATACCTGGGCTGG GGTGTATTCGCGCTGATGTCACGGTGA
Upstream 100 bases:
>100_bases AATTCAACTGAGATAAGTATGGTGTCCCCTGAATTCCTGTCTGAATTCCGTGAGTATGGTGTCCCCTGAATTCCATTCAT CTGTAAGGAGATTTCCCGAA
Downstream 100 bases:
>100_bases TGCGTTGACGCATCCGGTGGATCGTCAATGGCTGGAGACAACCCAAAGAGATCAGCCCTGGACACGAGACAAAAGTAAAA AGGCAGAAGGCTAAAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MDIPRIFNITESAHRIHNPFTPEKFATLGAALRLETGAHLLDLGSGSGEMLCTWARDHGVIGTGIDMSRLFTEQAKLRAV ELGVADQVKFIHGDAVGYVSDEKVGVAACVGATWIGGGVAGTIELLARSLRTGGIILIGEPYWRQLPPTEDVAKGCLANS ISDFLMLPELIASFGHLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPERYTAYTREYLGW GVFALMSR
Sequences:
>Translated_248_residues MDIPRIFNITESAHRIHNPFTPEKFATLGAALRLETGAHLLDLGSGSGEMLCTWARDHGVIGTGIDMSRLFTEQAKLRAV ELGVADQVKFIHGDAVGYVSDEKVGVAACVGATWIGGGVAGTIELLARSLRTGGIILIGEPYWRQLPPTEDVAKGCLANS ISDFLMLPELIASFGHLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPERYTAYTREYLGW GVFALMSR >Mature_248_residues MDIPRIFNITESAHRIHNPFTPEKFATLGAALRLETGAHLLDLGSGSGEMLCTWARDHGVIGTGIDMSRLFTEQAKLRAV ELGVADQVKFIHGDAVGYVSDEKVGVAACVGATWIGGGVAGTIELLARSLRTGGIILIGEPYWRQLPPTEDVAKGCLANS ISDFLMLPELIASFGHLGYDVVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPERYTAYTREYLGW GVFALMSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790760, Length=248, Percent_Identity=72.1774193548387, Blast_Score=379, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR017031 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27270; Mature: 27270
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPRIFNITESAHRIHNPFTPEKFATLGAALRLETGAHLLDLGSGSGEMLCTWARDHGV CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCCCEEEEECCCCCCEEEEEECCCCE IGTGIDMSRLFTEQAKLRAVELGVADQVKFIHGDAVGYVSDEKVGVAACVGATWIGGGVA EECCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHH GTIELLARSLRTGGIILIGEPYWRQLPPTEDVAKGCLANSISDFLMLPELIASFGHLGYD HHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPERYTAYTREYLGW HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVFALMSR HHHHHHCC >Mature Secondary Structure MDIPRIFNITESAHRIHNPFTPEKFATLGAALRLETGAHLLDLGSGSGEMLCTWARDHGV CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCCCEEEEECCCCCCEEEEEECCCCE IGTGIDMSRLFTEQAKLRAVELGVADQVKFIHGDAVGYVSDEKVGVAACVGATWIGGGVA EECCCCHHHHHHHHHHHHHHCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHCCCHH GTIELLARSLRTGGIILIGEPYWRQLPPTEDVAKGCLANSISDFLMLPELIASFGHLGYD HHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VVEMVLADQDGWDRYEAAKWLTMRRWLEANPDDELAKEVRAQLTSEPERYTAYTREYLGW HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GVFALMSR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]