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The map label for this gene is ybeQ [H]

Identifier: 78223961

GI number: 78223961

Start: 3124786

End: 3125601

Strand: Reverse

Name: ybeQ [H]

Synonym: Gmet_2765

Alternate gene names: 78223961

Gene position: 3125601-3124786 (Counterclockwise)

Preceding gene: 78223962

Following gene: 78223960

Centisome position: 78.19

GC content: 67.16

Gene sequence:

>816_bases
ATGTGGAAGAGCCCGAGGAACTCTTCCTTGAAGGGTAGATTGACCGCCGCAGGGACCTGCTCACTGCTGGCGGCCCTTCT
CCTGGCCGCTCCTGATCCGTCGGCATCGGCCCGGGTCGGCAGGAATGGCAAAACACCTGCGGCACAGGAGTTTGCCCGGA
CCAGGGGAGCGGCGCAGAGGGGTGACGCCGGCGCCGCTTTCCGGCTTGCCCTGATGTTTCTCGATGGCACGGGCGTTGCG
CGCAATCCCGCGGAATCGGTCCGGTTCATGAGGATCGCCGCGGAGCGGGGACACGTGCGGGCCCAGTACTTCCTGGGCAC
CCTCTACCACGAAGGTGCGGGAGTGAAGCAGGACCAGAAGGAAGCCGCCCGCTGGATCGCCAGGGCTGCGGCTGGTGGCG
ATGCCGAGGCCCAGTACGCCTATGGTCTCCTCCTTCTCTCCGGCGATGGGGTTCCGGTCGACAAGGTGGCAGCCATGGAG
TGGCTCGGCAAGGCCTCCCGCCAGGGGAGCGGGGGAGCCCGCGACGTGCTCCGGCAGCTGGTTGCCCTGCCGGGACGTCC
CACCGAGATCCGCTCCCTGGAGCCGTTCATTACGGCGCCCCGTGCCGCGCCTTCGGGCGACGCTGCCGATGGGGGAGCGC
ATCTTGAAGGGATGGGGGTGATCCTTGACCAGGGGGAGTTCGGCCTCCGGTTTTCCGTGCCCCACCTGAAGGAGGCGATT
GCCCCGGTCTATCCGGCGTATTCTCCGGACAAGGGGGTCTGGAACCGCATCCAAGGGGGGACGTTCGAAATCATCTACCG
GCCGGGTGCAAAGTAG

Upstream 100 bases:

>100_bases
CAGATCGTCATACGTCCCATGATGTACCTGGCCCTCTCCTACGACCACCGGATCATCGACGGCCGCGAGGCGGTCGGGTT
CCTGAAGAAGGTGAAGGAGT

Downstream 100 bases:

>100_bases
TTCTTCTGCCGGCCTGTTTCCCATTTCAGTAGCGGATACCACAATCATTCCGGGAGGATTCCATGTCTGAAGAGCTTTAC
GACCTCATTGTCATCGGTGC

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MWKSPRNSSLKGRLTAAGTCSLLAALLLAAPDPSASARVGRNGKTPAAQEFARTRGAAQRGDAGAAFRLALMFLDGTGVA
RNPAESVRFMRIAAERGHVRAQYFLGTLYHEGAGVKQDQKEAARWIARAAAGGDAEAQYAYGLLLLSGDGVPVDKVAAME
WLGKASRQGSGGARDVLRQLVALPGRPTEIRSLEPFITAPRAAPSGDAADGGAHLEGMGVILDQGEFGLRFSVPHLKEAI
APVYPAYSPDKGVWNRIQGGTFEIIYRPGAK

Sequences:

>Translated_271_residues
MWKSPRNSSLKGRLTAAGTCSLLAALLLAAPDPSASARVGRNGKTPAAQEFARTRGAAQRGDAGAAFRLALMFLDGTGVA
RNPAESVRFMRIAAERGHVRAQYFLGTLYHEGAGVKQDQKEAARWIARAAAGGDAEAQYAYGLLLLSGDGVPVDKVAAME
WLGKASRQGSGGARDVLRQLVALPGRPTEIRSLEPFITAPRAAPSGDAADGGAHLEGMGVILDQGEFGLRFSVPHLKEAI
APVYPAYSPDKGVWNRIQGGTFEIIYRPGAK
>Mature_271_residues
MWKSPRNSSLKGRLTAAGTCSLLAALLLAAPDPSASARVGRNGKTPAAQEFARTRGAAQRGDAGAAFRLALMFLDGTGVA
RNPAESVRFMRIAAERGHVRAQYFLGTLYHEGAGVKQDQKEAARWIARAAAGGDAEAQYAYGLLLLSGDGVPVDKVAAME
WLGKASRQGSGGARDVLRQLVALPGRPTEIRSLEPFITAPRAAPSGDAADGGAHLEGMGVILDQGEFGLRFSVPHLKEAI
APVYPAYSPDKGVWNRIQGGTFEIIYRPGAK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=155, Percent_Identity=34.1935483870968, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=32.2834645669291, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28564; Mature: 28564

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKSPRNSSLKGRLTAAGTCSLLAALLLAAPDPSASARVGRNGKTPAAQEFARTRGAAQR
CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GDAGAAFRLALMFLDGTGVARNPAESVRFMRIAAERGHVRAQYFLGTLYHEGAGVKQDQK
CCCCHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCHHHH
EAARWIARAAAGGDAEAQYAYGLLLLSGDGVPVDKVAAMEWLGKASRQGSGGARDVLRQL
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VALPGRPTEIRSLEPFITAPRAAPSGDAADGGAHLEGMGVILDQGEFGLRFSVPHLKEAI
HHCCCCCCHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCHHHHHHH
APVYPAYSPDKGVWNRIQGGTFEIIYRPGAK
HHCCCCCCCCCHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MWKSPRNSSLKGRLTAAGTCSLLAALLLAAPDPSASARVGRNGKTPAAQEFARTRGAAQR
CCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GDAGAAFRLALMFLDGTGVARNPAESVRFMRIAAERGHVRAQYFLGTLYHEGAGVKQDQK
CCCCHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCHHHH
EAARWIARAAAGGDAEAQYAYGLLLLSGDGVPVDKVAAMEWLGKASRQGSGGARDVLRQL
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VALPGRPTEIRSLEPFITAPRAAPSGDAADGGAHLEGMGVILDQGEFGLRFSVPHLKEAI
HHCCCCCCHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCHHHHHHH
APVYPAYSPDKGVWNRIQGGTFEIIYRPGAK
HHCCCCCCCCCHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]