| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223945
Identifier: 78223945
GI number: 78223945
Start: 3109062
End: 3109643
Strand: Reverse
Name: 78223945
Synonym: Gmet_2749
Alternate gene names: NA
Gene position: 3109643-3109062 (Counterclockwise)
Preceding gene: 78223946
Following gene: 78223944
Centisome position: 77.79
GC content: 64.43
Gene sequence:
>582_bases ATGCCGGCCGATGTGCTGGTCGTCAGCTGCGGCATCTTCCGTGATGAGCTGGCGGCCCTCGGGCGGGCGGGGAAATTCCC CTGGCCCGTGAGGTTTCTGGATTCCATGCTCCACATGGAGCCGGAGCGTCTGGAGCAGGCCCTGACGGCCCTTGTTCAAT CCCTCGCCGGACAGCGCATCGTGCTGCTCTTCGGCGACTGCCAAGCCCGGATGGACCTGCTTGCGTCCCGCGAGGGGGCC TGCCGGGTGAAGGGGCACAACTGCTGCGAGCTGGTGCTGGGGAGGGAGGAATACCGGCGGTTGCGGAGAGAAGGGGCCTT TTTCCTGCTTCCCGAATGGACCGCGCGCTGGCGGGAGGTATTCCGGGAGCGGCTTGGTTTCGTTACCCCTGAAAGCGCGC GGCTCTTCATGCAGGAGATGCATCGCCGCATCTTCTATCTCGATACGGGAGTGGTGCCGGTGCCTGCGGAAACCCTTGCG GAGATAGGGTGTTACGTCGGATTGCCGGTGGAGGTTAAGGCGGTTGCGCCTGATCGCCTGGCCGATGCCGTCAGGAAGGC GCTGGAGGGTTTCAATGAGTGA
Upstream 100 bases:
>100_bases CGTCATCCGCGGACGTTCCCCTCGATACGCCGCTGGAAACGTTGCTTGCCGTGCGGGCCGCGGTCGAGGGGCACGGAGGC GGGCGGTGAGGGGCGAAACC
Downstream 100 bases:
>100_bases CGACTCCTATCGCAAGTCGTTGAATTTCCTCTTTGTGGAGTTGCTGGAGAATGTCCTGCGGCTGGCGGAGAACCCGGGGG AGTGCGGCAGCTACATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPADVLVVSCGIFRDELAALGRAGKFPWPVRFLDSMLHMEPERLEQALTALVQSLAGQRIVLLFGDCQARMDLLASREGA CRVKGHNCCELVLGREEYRRLRREGAFFLLPEWTARWREVFRERLGFVTPESARLFMQEMHRRIFYLDTGVVPVPAETLA EIGCYVGLPVEVKAVAPDRLADAVRKALEGFNE
Sequences:
>Translated_193_residues MPADVLVVSCGIFRDELAALGRAGKFPWPVRFLDSMLHMEPERLEQALTALVQSLAGQRIVLLFGDCQARMDLLASREGA CRVKGHNCCELVLGREEYRRLRREGAFFLLPEWTARWREVFRERLGFVTPESARLFMQEMHRRIFYLDTGVVPVPAETLA EIGCYVGLPVEVKAVAPDRLADAVRKALEGFNE >Mature_192_residues PADVLVVSCGIFRDELAALGRAGKFPWPVRFLDSMLHMEPERLEQALTALVQSLAGQRIVLLFGDCQARMDLLASREGAC RVKGHNCCELVLGREEYRRLRREGAFFLLPEWTARWREVFRERLGFVTPESARLFMQEMHRRIFYLDTGVVPVPAETLAE IGCYVGLPVEVKAVAPDRLADAVRKALEGFNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21893; Mature: 21762
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADVLVVSCGIFRDELAALGRAGKFPWPVRFLDSMLHMEPERLEQALTALVQSLAGQRI CCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE VLLFGDCQARMDLLASREGACRVKGHNCCELVLGREEYRRLRREGAFFLLPEWTARWREV EEEECCHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHHHHCCCEEEECHHHHHHHHH FRERLGFVTPESARLFMQEMHRRIFYLDTGVVPVPAETLAEIGCYVGLPVEVKAVAPDRL HHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHH ADAVRKALEGFNE HHHHHHHHHCCCC >Mature Secondary Structure PADVLVVSCGIFRDELAALGRAGKFPWPVRFLDSMLHMEPERLEQALTALVQSLAGQRI CCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE VLLFGDCQARMDLLASREGACRVKGHNCCELVLGREEYRRLRREGAFFLLPEWTARWREV EEEECCHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHHHHCCCEEEECHHHHHHHHH FRERLGFVTPESARLFMQEMHRRIFYLDTGVVPVPAETLAEIGCYVGLPVEVKAVAPDRL HHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHH ADAVRKALEGFNE HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA