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The map label for this gene is ycbZ [H]

Identifier: 78223942

GI number: 78223942

Start: 3104080

End: 3106515

Strand: Reverse

Name: ycbZ [H]

Synonym: Gmet_2746

Alternate gene names: 78223942

Gene position: 3106515-3104080 (Counterclockwise)

Preceding gene: 78223943

Following gene: 78223941

Centisome position: 77.71

GC content: 62.32

Gene sequence:

>2436_bases
ATGCCACTCCCCAGCCAGAGAAAACTTCTTCCCGAGCAGCTCCGCTGGACCTGCGATCCCGGTCAGTTCGATTTCACCAC
CACCGACGACCTCCCCGAGCTGGAAGGAACCCTGGGACAGGCCCGGGCGCTCGCTTCCATCGACTTCGGTCTCGACATTC
GGGAGAGCGGCTTCAACCTCTTCCTGACCGGCGAGGCCGGCACCGGCCGCACCTCTACCATCAAGAACATCCTGAAGAAG
AAGGCCAAGACCGAGCCGATCCCTTCCGACTGGGTCTATGTCAACAACTTCAAGAGCCCTGACCTCCCCATTGCCCTGGC
GCTGCCGGCAGGGAAGGGGACCGAGCTTTCCCTGGACATGGATGAGCTGATCACCACGGTTCGCTCCATCATCCCCAAGG
CCCTGGACAGCAAGGAGTACGAGAACAACAAGGCCACCATCGTCGAGGCATACCAGGAGAAGAACAACGAGCTGTTCGGG
CAGCTGGAGGCCGAGGCCCAGGAGAAAGGGTTTGCCCTGCAGCGCACCGTCTCGGGGCTCGTCATGGTTCCCCAGAAGGA
GGAGCGCAACTACACCCAGGAGGAGTACGAGGCCCTTAGCGACCAGGAGAAGGGGAAGCTGGAGGAGGGGGGGCAGGAAC
TGACCGAGAAGCTCAACGACGTGCTTCGCCAGGTGCGCGACAACGAGAAGCAGACCAAGGAGAGCCTCGCCCAGCTGGAC
CGGGACCTGGGCAATGCCTCGGTGGGGCACCACATCGATCCGCTCCGGGAGAAGTACGGTGAGTCCCCCAAGGTTCTGGA
GTATCTGAACACCGTTCAGGAGGACATCATCGCCAACCTGGAGGACTTCAAGCCCCAGCAGCAGGTCCAGTCCCCTATTC
CGGGGCTCAAGCTCCCCCGCCAGGAGCCCTCCTTCGAGCGCTACCAGGTGAACGTCTTCGTCGATAACCATGACGCCGAA
GGGGCGCCGGTGGTCTTCGAACCAAACCCCACTTACAGCAACCTCTTCGGTCGCACCGAGCACATCATGCAGATGGGGGG
AACGGCTACCACCAACTTCACCATGATCAAGCCGGGGGCGCTCCACAGGGCCAATAGCGGCTACCTCATCGTCGACGCCC
GCGAGGTCCTCGTCAACCCCTACTCATGGGATGCGTTGAAACGCTGCATCCGTAGTGCCGAGATCAAGTTCGAAGACCCC
CTGGAGCAGTACCGCTTCATCACCATCGTCTCCATGAAGCCTGAGGCAATACCCCTCCAGGCCAAGATCATCATGATCGG
CTCGCCGTGGATCTACTACCTCCTCTACCACCTGGAGCCCGACTACCGGAAGTTCTTCAAGGTGAAGGTGGATTTCGACA
GCCGCATCGCCCGCACCCCGGAGGTGCTGAAGGACTATGCCCTCTTCGTTTCCACCCACTGCAAGAACGAGAAGCTCCTC
CCCTTCGACCGCAGCGGCGTGGCCGGGCTCATCGAGTACTCGGCCCGGCTGGTGGAGGACCAGGAGAAGCTCTCCTCCCA
GTTCATGGAGATCGCCGACCTCATCCGCGAGGCCAGCTACTGGGCCGGCAAGGACGGCGGCGGCCCCGTCACCCACGCCC
ACGTGGCCAACGCCATCGAACAGAAGGTCTACCGGAGCAACCGGATCGAGGAGCGGATGCAGGAGCTCTTCGACGACGGG
ACCATCCTCGTTGACGTGGACGGCGCCATGCCGGGGCAGATCAACGGCCTGTCGGTCATCTCCCTGGGAGACCACACCTT
TGGCCGTCCGTCCCGGGTCACGGCCCGGGTGTATCTCGGACGGGCCGGCATGGTCAACATCGAGCGGGAGGTGAAGCTCT
CGGGACCCATCCACGACAAGGGGGTCCTGATCCTCACCGGCTACCTGGGGGGGAAGTTCGCCCACGACAAGCCTCTCTCG
TTCTCCGCCTCCATCTGCTTCGAGCAGAACTACGAGGGAGTCGAGGGGGACAGCGCCTCCTCCACCGAGCTCTACTGCCT
GTTGTCCGCCTTCTCCGGGGTACCGATCAGGCAGGGGATCGCCGTCACCGGCAGCGTCAACCAGCACGGCATGATCCAGC
CCATCGGCGGCGTCAACTTCAAGATCGAGGGGTTCTACGCCGTCTGCAAGGCCAAGGGACTCACGGGCGAGCAGGGGGTC
ATCATCCCCAAATCCAACGAGCGGCATCTGATGCTGAACGACGAGGTGGTCCAGGCGGTGCGCGACGGCAAGTTTCACAT
CTGGAGCGTGGAGACCATTGACCAGGGGATCGAGCTCCTCACCGGCGTTGCGGCCGGCGAGCGGCAGGAGGACGGCACCT
ATCCGGAAGAGAGCATCAACCACCTGGTGGACAAGCGGCTGCGGGAGATGATTGAAAGCATGAAGATGTTCGGCGCTTCC
GACAAGGATGAGAAGAAGCAGGAAGGAGAAAAATGA

Upstream 100 bases:

>100_bases
TTCCTTTCCTTGAGACGGCTGAACCGGCCCCCTGACCTTACAAATCCTGAAGGCGTGGTATACTTGTTCAATTCAAATGC
AATGAATAAGGAGGCCCGTC

Downstream 100 bases:

>100_bases
GGAACCGATGAGTAAAATTTTCCCACCAAGGGGGAATATTGTTAGAGATTTCCGCTGAAAATGCGGTAATATTTTGATAC
GCACGGCAGAAGCTGAAGCC

Product: peptidase S16, lon-like

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 811; Mature: 810

Protein sequence:

>811_residues
MPLPSQRKLLPEQLRWTCDPGQFDFTTTDDLPELEGTLGQARALASIDFGLDIRESGFNLFLTGEAGTGRTSTIKNILKK
KAKTEPIPSDWVYVNNFKSPDLPIALALPAGKGTELSLDMDELITTVRSIIPKALDSKEYENNKATIVEAYQEKNNELFG
QLEAEAQEKGFALQRTVSGLVMVPQKEERNYTQEEYEALSDQEKGKLEEGGQELTEKLNDVLRQVRDNEKQTKESLAQLD
RDLGNASVGHHIDPLREKYGESPKVLEYLNTVQEDIIANLEDFKPQQQVQSPIPGLKLPRQEPSFERYQVNVFVDNHDAE
GAPVVFEPNPTYSNLFGRTEHIMQMGGTATTNFTMIKPGALHRANSGYLIVDAREVLVNPYSWDALKRCIRSAEIKFEDP
LEQYRFITIVSMKPEAIPLQAKIIMIGSPWIYYLLYHLEPDYRKFFKVKVDFDSRIARTPEVLKDYALFVSTHCKNEKLL
PFDRSGVAGLIEYSARLVEDQEKLSSQFMEIADLIREASYWAGKDGGGPVTHAHVANAIEQKVYRSNRIEERMQELFDDG
TILVDVDGAMPGQINGLSVISLGDHTFGRPSRVTARVYLGRAGMVNIEREVKLSGPIHDKGVLILTGYLGGKFAHDKPLS
FSASICFEQNYEGVEGDSASSTELYCLLSAFSGVPIRQGIAVTGSVNQHGMIQPIGGVNFKIEGFYAVCKAKGLTGEQGV
IIPKSNERHLMLNDEVVQAVRDGKFHIWSVETIDQGIELLTGVAAGERQEDGTYPEESINHLVDKRLREMIESMKMFGAS
DKDEKKQEGEK

Sequences:

>Translated_811_residues
MPLPSQRKLLPEQLRWTCDPGQFDFTTTDDLPELEGTLGQARALASIDFGLDIRESGFNLFLTGEAGTGRTSTIKNILKK
KAKTEPIPSDWVYVNNFKSPDLPIALALPAGKGTELSLDMDELITTVRSIIPKALDSKEYENNKATIVEAYQEKNNELFG
QLEAEAQEKGFALQRTVSGLVMVPQKEERNYTQEEYEALSDQEKGKLEEGGQELTEKLNDVLRQVRDNEKQTKESLAQLD
RDLGNASVGHHIDPLREKYGESPKVLEYLNTVQEDIIANLEDFKPQQQVQSPIPGLKLPRQEPSFERYQVNVFVDNHDAE
GAPVVFEPNPTYSNLFGRTEHIMQMGGTATTNFTMIKPGALHRANSGYLIVDAREVLVNPYSWDALKRCIRSAEIKFEDP
LEQYRFITIVSMKPEAIPLQAKIIMIGSPWIYYLLYHLEPDYRKFFKVKVDFDSRIARTPEVLKDYALFVSTHCKNEKLL
PFDRSGVAGLIEYSARLVEDQEKLSSQFMEIADLIREASYWAGKDGGGPVTHAHVANAIEQKVYRSNRIEERMQELFDDG
TILVDVDGAMPGQINGLSVISLGDHTFGRPSRVTARVYLGRAGMVNIEREVKLSGPIHDKGVLILTGYLGGKFAHDKPLS
FSASICFEQNYEGVEGDSASSTELYCLLSAFSGVPIRQGIAVTGSVNQHGMIQPIGGVNFKIEGFYAVCKAKGLTGEQGV
IIPKSNERHLMLNDEVVQAVRDGKFHIWSVETIDQGIELLTGVAAGERQEDGTYPEESINHLVDKRLREMIESMKMFGAS
DKDEKKQEGEK
>Mature_810_residues
PLPSQRKLLPEQLRWTCDPGQFDFTTTDDLPELEGTLGQARALASIDFGLDIRESGFNLFLTGEAGTGRTSTIKNILKKK
AKTEPIPSDWVYVNNFKSPDLPIALALPAGKGTELSLDMDELITTVRSIIPKALDSKEYENNKATIVEAYQEKNNELFGQ
LEAEAQEKGFALQRTVSGLVMVPQKEERNYTQEEYEALSDQEKGKLEEGGQELTEKLNDVLRQVRDNEKQTKESLAQLDR
DLGNASVGHHIDPLREKYGESPKVLEYLNTVQEDIIANLEDFKPQQQVQSPIPGLKLPRQEPSFERYQVNVFVDNHDAEG
APVVFEPNPTYSNLFGRTEHIMQMGGTATTNFTMIKPGALHRANSGYLIVDAREVLVNPYSWDALKRCIRSAEIKFEDPL
EQYRFITIVSMKPEAIPLQAKIIMIGSPWIYYLLYHLEPDYRKFFKVKVDFDSRIARTPEVLKDYALFVSTHCKNEKLLP
FDRSGVAGLIEYSARLVEDQEKLSSQFMEIADLIREASYWAGKDGGGPVTHAHVANAIEQKVYRSNRIEERMQELFDDGT
ILVDVDGAMPGQINGLSVISLGDHTFGRPSRVTARVYLGRAGMVNIEREVKLSGPIHDKGVLILTGYLGGKFAHDKPLSF
SASICFEQNYEGVEGDSASSTELYCLLSAFSGVPIRQGIAVTGSVNQHGMIQPIGGVNFKIEGFYAVCKAKGLTGEQGVI
IPKSNERHLMLNDEVVQAVRDGKFHIWSVETIDQGIELLTGVAAGERQEDGTYPEESINHLVDKRLREMIESMKMFGASD
KDEKKQEGEK

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=424, Percent_Identity=34.6698113207547, Blast_Score=244, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 90740; Mature: 90609

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPSQRKLLPEQLRWTCDPGQFDFTTTDDLPELEGTLGQARALASIDFGLDIRESGFNL
CCCCCCCCCCHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEECCCCEE
FLTGEAGTGRTSTIKNILKKKAKTEPIPSDWVYVNNFKSPDLPIALALPAGKGTELSLDM
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEECCH
DELITTVRSIIPKALDSKEYENNKATIVEAYQEKNNELFGQLEAEAQEKGFALQRTVSGL
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCEEEHHHHHHHHCCCCHHHHCCCE
VMVPQKEERNYTQEEYEALSDQEKGKLEEGGQELTEKLNDVLRQVRDNEKQTKESLAQLD
EECCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RDLGNASVGHHIDPLREKYGESPKVLEYLNTVQEDIIANLEDFKPQQQVQSPIPGLKLPR
HHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCCCCCCCCC
QEPSFERYQVNVFVDNHDAEGAPVVFEPNPTYSNLFGRTEHIMQMGGTATTNFTMIKPGA
CCCCCCEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
LHRANSGYLIVDAREVLVNPYSWDALKRCIRSAEIKFEDPLEQYRFITIVSMKPEAIPLQ
CEECCCCEEEEECHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCEEEEEEECCCCCCCEE
AKIIMIGSPWIYYLLYHLEPDYRKFFKVKVDFDSRIARTPEVLKDYALFVSTHCKNEKLL
EEEEEEECCHHHEEEECCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCC
PFDRSGVAGLIEYSARLVEDQEKLSSQFMEIADLIREASYWAGKDGGGPVTHAHVANAIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QKVYRSNRIEERMQELFDDGTILVDVDGAMPGQINGLSVISLGDHTFGRPSRVTARVYLG
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC
RAGMVNIEREVKLSGPIHDKGVLILTGYLGGKFAHDKPLSFSASICFEQNYEGVEGDSAS
CCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
STELYCLLSAFSGVPIRQGIAVTGSVNQHGMIQPIGGVNFKIEGFYAVCKAKGLTGEQGV
CCHHEEEEHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEEEEEEECCCCCCCCE
IIPKSNERHLMLNDEVVQAVRDGKFHIWSVETIDQGIELLTGVAAGERQEDGTYPEESIN
EEECCCCCEEEECHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
HLVDKRLREMIESMKMFGASDKDEKKQEGEK
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
PLPSQRKLLPEQLRWTCDPGQFDFTTTDDLPELEGTLGQARALASIDFGLDIRESGFNL
CCCCCCCCCHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCEEECCCCEE
FLTGEAGTGRTSTIKNILKKKAKTEPIPSDWVYVNNFKSPDLPIALALPAGKGTELSLDM
EEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCEEECCH
DELITTVRSIIPKALDSKEYENNKATIVEAYQEKNNELFGQLEAEAQEKGFALQRTVSGL
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCEEEHHHHHHHHCCCCHHHHCCCE
VMVPQKEERNYTQEEYEALSDQEKGKLEEGGQELTEKLNDVLRQVRDNEKQTKESLAQLD
EECCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RDLGNASVGHHIDPLREKYGESPKVLEYLNTVQEDIIANLEDFKPQQQVQSPIPGLKLPR
HHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCCCCCCCCC
QEPSFERYQVNVFVDNHDAEGAPVVFEPNPTYSNLFGRTEHIMQMGGTATTNFTMIKPGA
CCCCCCEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
LHRANSGYLIVDAREVLVNPYSWDALKRCIRSAEIKFEDPLEQYRFITIVSMKPEAIPLQ
CEECCCCEEEEECHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCEEEEEEECCCCCCCEE
AKIIMIGSPWIYYLLYHLEPDYRKFFKVKVDFDSRIARTPEVLKDYALFVSTHCKNEKLL
EEEEEEECCHHHEEEECCCCCCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCC
PFDRSGVAGLIEYSARLVEDQEKLSSQFMEIADLIREASYWAGKDGGGPVTHAHVANAIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QKVYRSNRIEERMQELFDDGTILVDVDGAMPGQINGLSVISLGDHTFGRPSRVTARVYLG
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEC
RAGMVNIEREVKLSGPIHDKGVLILTGYLGGKFAHDKPLSFSASICFEQNYEGVEGDSAS
CCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
STELYCLLSAFSGVPIRQGIAVTGSVNQHGMIQPIGGVNFKIEGFYAVCKAKGLTGEQGV
CCHHEEEEHHHCCCCCCCCEEEECCCCCCCCEEECCCCCEEEEEEEEEEEECCCCCCCCE
IIPKSNERHLMLNDEVVQAVRDGKFHIWSVETIDQGIELLTGVAAGERQEDGTYPEESIN
EEECCCCCEEEECHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
HLVDKRLREMIESMKMFGASDKDEKKQEGEK
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]