| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223929
Identifier: 78223929
GI number: 78223929
Start: 3088361
End: 3089470
Strand: Direct
Name: 78223929
Synonym: Gmet_2733
Alternate gene names: NA
Gene position: 3088361-3089470 (Clockwise)
Preceding gene: 78223925
Following gene: 78223931
Centisome position: 77.26
GC content: 62.79
Gene sequence:
>1110_bases ATGGAAGCGATCACCATGTGCAAGAAGGTTTTCATCGCGGCAACGGGAATGAACTCGGGCAAGACCACCATCAGCGTCTC GCTGATGCACCTGGCCCGGAAAAAGTACGGCAGGGTCGGCTTCATCAAGGCCATCGGCCCCAAGTGCCAGCTCTTCAACG ATATCACCGTCGACATGGACGCGGCCCTCATGGCGCGCATCTTCGGCCTCGAAGGGGACATCAACCATATGTCGCCGGTA GTGCTGGAGCGGGGCTCCACCAAGCGCTTCATCGACGGGGAGATCCCCACCCTCTGGCCCGCGGAGCGGATCACCGAAGC AGTGCGGGAGTTGGAGCGGAAAAACGACTACCTCATCATCGAAGGATCGGGCCACGGCGGGGTCGGTTCCGTCATCGGCA TGAACAACGCCAAGGTGGCCAAGCTGGTGGATGCCCCGGCCATCATGGTCTCCGGCGGCGGCATCGGCAACGTCATCGAC TCAGTCCAGCTGAACCTCCCCCTCTACCGGATGGAGGGAGCCGACCTGCGGATGCTCCTGGTCAACAAGCTCATCCCCGA GAAGCGGGAGACCTCCCTCTCCTACCTCCAGCGGGCCTTCACCCCCCACGGCATCAACGTCGTCGGGGCCTTCGACTGGT CGCCGATCCTCGCCAACCCCACCCTCAACAACATTGCGCGGCTCCTGGCCCACCCCCTCAGGGGGGACCAGAGCCAGGGG ACCCGGATCATCCACCATATCCAACTGGGGGCAGCCTCGTCCCAGAAGGTCATCGACGGACTTGCCGAATCGACCATGCT CCTGGTCACCAGCTCCCGGGACGAGCTCCTCGTCACCCTCTCGTCCCTCTACAACATCCCCGCCTACCGGGAGAAGATCG CCGGCCTCGTGGTTCCCGGCCACGCGCCGGTCTCCGCCATCACCCAGAAGATCCTCGACGACAGCTCCATCCCCTACATC CGGATCCACGAGACCACCGCCGACATCTTCTCGGCCATGAAATACCACGTCTCCAAGATCAGCGCCGAAGACGCCGAGAA GATCGATCTCGTCAAGGCCCAGGCGGAAAAGGTGCTGGATTTCGACGAACTGGACCGGATGCTGTCATAG
Upstream 100 bases:
>100_bases CGTGGGGGGCAAGGGAAAAGCCATACGGTATACGTGCTTGCATAGAATCTTCTGGTAAAATTATACTCGTCGTTTGGGTA GTGGATCTCAGCGGTCAGAG
Downstream 100 bases:
>100_bases GGGGCAGGGCGAGGGGTGTAATTCCCTCTCCCCGTGGGAGAGGGTGCCCGGAGGGCGGGTGAGGGGATATTCGCCTCGCC GCACCATCGCCTCAAGGGTC
Product: cobyrinic acid a,c-diamide synthase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MEAITMCKKVFIAATGMNSGKTTISVSLMHLARKKYGRVGFIKAIGPKCQLFNDITVDMDAALMARIFGLEGDINHMSPV VLERGSTKRFIDGEIPTLWPAERITEAVRELERKNDYLIIEGSGHGGVGSVIGMNNAKVAKLVDAPAIMVSGGGIGNVID SVQLNLPLYRMEGADLRMLLVNKLIPEKRETSLSYLQRAFTPHGINVVGAFDWSPILANPTLNNIARLLAHPLRGDQSQG TRIIHHIQLGAASSQKVIDGLAESTMLLVTSSRDELLVTLSSLYNIPAYREKIAGLVVPGHAPVSAITQKILDDSSIPYI RIHETTADIFSAMKYHVSKISAEDAEKIDLVKAQAEKVLDFDELDRMLS
Sequences:
>Translated_369_residues MEAITMCKKVFIAATGMNSGKTTISVSLMHLARKKYGRVGFIKAIGPKCQLFNDITVDMDAALMARIFGLEGDINHMSPV VLERGSTKRFIDGEIPTLWPAERITEAVRELERKNDYLIIEGSGHGGVGSVIGMNNAKVAKLVDAPAIMVSGGGIGNVID SVQLNLPLYRMEGADLRMLLVNKLIPEKRETSLSYLQRAFTPHGINVVGAFDWSPILANPTLNNIARLLAHPLRGDQSQG TRIIHHIQLGAASSQKVIDGLAESTMLLVTSSRDELLVTLSSLYNIPAYREKIAGLVVPGHAPVSAITQKILDDSSIPYI RIHETTADIFSAMKYHVSKISAEDAEKIDLVKAQAEKVLDFDELDRMLS >Mature_369_residues MEAITMCKKVFIAATGMNSGKTTISVSLMHLARKKYGRVGFIKAIGPKCQLFNDITVDMDAALMARIFGLEGDINHMSPV VLERGSTKRFIDGEIPTLWPAERITEAVRELERKNDYLIIEGSGHGGVGSVIGMNNAKVAKLVDAPAIMVSGGGIGNVID SVQLNLPLYRMEGADLRMLLVNKLIPEKRETSLSYLQRAFTPHGINVVGAFDWSPILANPTLNNIARLLAHPLRGDQSQG TRIIHHIQLGAASSQKVIDGLAESTMLLVTSSRDELLVTLSSLYNIPAYREKIAGLVVPGHAPVSAITQKILDDSSIPYI RIHETTADIFSAMKYHVSKISAEDAEKIDLVKAQAEKVLDFDELDRMLS
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 slr0039 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010766 [H]
Pfam domain/function: PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 40253; Mature: 40253
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAITMCKKVFIAATGMNSGKTTISVSLMHLARKKYGRVGFIKAIGPKCQLFNDITVDMD CCHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCEEECCCEECHH AALMARIFGLEGDINHMSPVVLERGSTKRFIDGEIPTLWPAERITEAVRELERKNDYLII HHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEE EGSGHGGVGSVIGMNNAKVAKLVDAPAIMVSGGGIGNVIDSVQLNLPLYRMEGADLRMLL EECCCCCCCEEEECCCCCEEHEECCCEEEEECCCHHHHHHCEEECCCEEEECCCCHHHHH VNKLIPEKRETSLSYLQRAFTPHGINVVGAFDWSPILANPTLNNIARLLAHPLRGDQSQG HHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCCCC TRIIHHIQLGAASSQKVIDGLAESTMLLVTSSRDELLVTLSSLYNIPAYREKIAGLVVPG CEEEEEEEECCCCHHHHHHHHHCCEEEEEECCCCHHEEEHHHHHCCCHHHHHHCCEEECC HAPVSAITQKILDDSSIPYIRIHETTADIFSAMKYHVSKISAEDAEKIDLVKAQAEKVLD CCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FDELDRMLS HHHHHHHCC >Mature Secondary Structure MEAITMCKKVFIAATGMNSGKTTISVSLMHLARKKYGRVGFIKAIGPKCQLFNDITVDMD CCHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCEEECCCEECHH AALMARIFGLEGDINHMSPVVLERGSTKRFIDGEIPTLWPAERITEAVRELERKNDYLII HHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEE EGSGHGGVGSVIGMNNAKVAKLVDAPAIMVSGGGIGNVIDSVQLNLPLYRMEGADLRMLL EECCCCCCCEEEECCCCCEEHEECCCEEEEECCCHHHHHHCEEECCCEEEECCCCHHHHH VNKLIPEKRETSLSYLQRAFTPHGINVVGAFDWSPILANPTLNNIARLLAHPLRGDQSQG HHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCCCC TRIIHHIQLGAASSQKVIDGLAESTMLLVTSSRDELLVTLSSLYNIPAYREKIAGLVVPG CEEEEEEEECCCCHHHHHHHHHCCEEEEEECCCCHHEEEHHHHHCCCHHHHHHCCEEECC HAPVSAITQKILDDSSIPYIRIHETTADIFSAMKYHVSKISAEDAEKIDLVKAQAEKVLD CCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FDELDRMLS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]