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The map label for this gene is 78223811

Identifier: 78223811

GI number: 78223811

Start: 2960558

End: 2961349

Strand: Direct

Name: 78223811

Synonym: Gmet_2614

Alternate gene names: NA

Gene position: 2960558-2961349 (Clockwise)

Preceding gene: 78223810

Following gene: 78223813

Centisome position: 74.06

GC content: 62.63

Gene sequence:

>792_bases
ATGCAGACCGATGGCAATTTTTTTGTGAAACTTGTGGGGATGTCCACGTTCCTGGAACAGCAGGAGAACCTCGACGAGAG
CCTCAACGATTTCGCCGCCATGGCCGCGAATATCGTCAACGTGGAGAACTGCTCCATCATGCTCTTCCGGGAGGGGGACA
AGCCGGGGGACTTCCGCCTGCGGGTCTTCGCCAAGACCGGCCATCTCCCTGAAAATGCCTTCCGCGAGGCGGTGAAGGTG
AACGACGGCATCGCCGGTCGGGTGGCGGCCACGGGACAGGCCCTCCTCGTGGAGGACATCACCCGCTCCCCCTACCTCCC
CCTTGCCCGGACGCCGGAGGGGACCAGCAAGTGCTTCATTTCGGTGCCGGTCCTGATCGGCACCAAGGTTGTAGGTGTCA
TCAACCTGACCAACCCGCGGGATGGCCGCTGCTTCACCGACGATGACCTGGCCCTTACCACCTTCGTGGCGCTCCTGGTG
GGAAAATCGATCCAGGTGGTCCAGCTCCAGAACGTGCTCCGTTCGCGCTTCGCCCAGATGGCCATCTCCCGGGAGACCAA
GAGCCTCGTGGCAAGCAAGGTGACCGAGTTTTACCAGGACCCGGCGCGGCTCGCGCGGATCGCGGCCAAGACTTTCTATC
GGGAGATGACCCGGGCCGGCCTCGGCGCGGAGCACATCCTCAATGCAGCCACGGAGATCGTGGGGCTGCTGGGCGACAAC
CTGAAGAAGCACAAGAAGCGTTTGACGGATACGCAGGCTACGGCCCCCCAGGAGCAGATCATTGGAGTGTAG

Upstream 100 bases:

>100_bases
CTCCACGGCTACTGGGAAGGAAGCCTCGATGTGGCCGTGACCGGCTGATTGGAGCCAATCGCCAACGCCCGGCGTAACCC
GCAAGGAAGTGAGATGACCT

Downstream 100 bases:

>100_bases
CCCCCCGGATCACTCAACCGTTGCGCGCGGGGCATTGCAGTACTTGCACGAAGCCTCCTGCCATTTGAGATACTCGCCGC
AGGAGCGGCACTTCCAGAAC

Product: putative GAF sensor protein

Products: NA

Alternate protein names: Diguanylate Cyclase; Phytochrome Sensor Protein; GAF Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With GAF Sensor

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQTDGNFFVKLVGMSTFLEQQENLDESLNDFAAMAANIVNVENCSIMLFREGDKPGDFRLRVFAKTGHLPENAFREAVKV
NDGIAGRVAATGQALLVEDITRSPYLPLARTPEGTSKCFISVPVLIGTKVVGVINLTNPRDGRCFTDDDLALTTFVALLV
GKSIQVVQLQNVLRSRFAQMAISRETKSLVASKVTEFYQDPARLARIAAKTFYREMTRAGLGAEHILNAATEIVGLLGDN
LKKHKKRLTDTQATAPQEQIIGV

Sequences:

>Translated_263_residues
MQTDGNFFVKLVGMSTFLEQQENLDESLNDFAAMAANIVNVENCSIMLFREGDKPGDFRLRVFAKTGHLPENAFREAVKV
NDGIAGRVAATGQALLVEDITRSPYLPLARTPEGTSKCFISVPVLIGTKVVGVINLTNPRDGRCFTDDDLALTTFVALLV
GKSIQVVQLQNVLRSRFAQMAISRETKSLVASKVTEFYQDPARLARIAAKTFYREMTRAGLGAEHILNAATEIVGLLGDN
LKKHKKRLTDTQATAPQEQIIGV
>Mature_263_residues
MQTDGNFFVKLVGMSTFLEQQENLDESLNDFAAMAANIVNVENCSIMLFREGDKPGDFRLRVFAKTGHLPENAFREAVKV
NDGIAGRVAATGQALLVEDITRSPYLPLARTPEGTSKCFISVPVLIGTKVVGVINLTNPRDGRCFTDDDLALTTFVALLV
GKSIQVVQLQNVLRSRFAQMAISRETKSLVASKVTEFYQDPARLARIAAKTFYREMTRAGLGAEHILNAATEIVGLLGDN
LKKHKKRLTDTQATAPQEQIIGV

Specific function: Unknown

COG id: COG3605

COG function: function code T; Signal transduction protein containing GAF and PtsI domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28815; Mature: 28815

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDGNFFVKLVGMSTFLEQQENLDESLNDFAAMAANIVNVENCSIMLFREGDKPGDFRL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEE
RVFAKTGHLPENAFREAVKVNDGIAGRVAATGQALLVEDITRSPYLPLARTPEGTSKCFI
EEEEECCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEHHHCCCCCCCCCCCCCCCCEEEE
SVPVLIGTKVVGVINLTNPRDGRCFTDDDLALTTFVALLVGKSIQVVQLQNVLRSRFAQM
EEHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AISRETKSLVASKVTEFYQDPARLARIAAKTFYREMTRAGLGAEHILNAATEIVGLLGDN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LKKHKKRLTDTQATAPQEQIIGV
HHHHHHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure
MQTDGNFFVKLVGMSTFLEQQENLDESLNDFAAMAANIVNVENCSIMLFREGDKPGDFRL
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCEEE
RVFAKTGHLPENAFREAVKVNDGIAGRVAATGQALLVEDITRSPYLPLARTPEGTSKCFI
EEEEECCCCCHHHHHHHHHCCCCCCCCHHHCCCCCEEHHHCCCCCCCCCCCCCCCCEEEE
SVPVLIGTKVVGVINLTNPRDGRCFTDDDLALTTFVALLVGKSIQVVQLQNVLRSRFAQM
EEHHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AISRETKSLVASKVTEFYQDPARLARIAAKTFYREMTRAGLGAEHILNAATEIVGLLGDN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LKKHKKRLTDTQATAPQEQIIGV
HHHHHHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA