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The map label for this gene is 78223810

Identifier: 78223810

GI number: 78223810

Start: 2960020

End: 2960505

Strand: Direct

Name: 78223810

Synonym: Gmet_2613

Alternate gene names: NA

Gene position: 2960020-2960505 (Clockwise)

Preceding gene: 78223806

Following gene: 78223811

Centisome position: 74.05

GC content: 62.35

Gene sequence:

>486_bases
ATGAACAGGAGAACTTTCTTGAAGACGGCGGCCCTTGGGGCCGTGGCTGCCGGCATTACCCGCGAGGCCGCAGCTGCCGC
GGAAAAGTACTTTCCCGTCAAGGCCGACCAGAGCCTCTTCGCCACCATCAACCGTGCCAAGGACCCGGCAAAGAAAACTC
CCTTGGAGCAGAAGCACGCACCGGTCATCAAGGCGCCGCACGCGGTGAAAGCAGGTGAACCGTTCACCGTGGAGGTTACG
GTGGGTGAGCAGGTCCACCCCATGGGACCGACCCACTGGATCGAGTATATCGAGTTGAATGTGGGAAACGAGCCCGCCGG
ACGGATCGCGATGCAACCCCGCGGCTTCCTGCATCCGAAGGTGACCTTCACTGTTGTTATCCCGAAGGAGGCGGCACCCG
CCGGCAAGATCACCCTCGTGGCCCATCAGCGCTGCAACCTCCACGGCTACTGGGAAGGAAGCCTCGATGTGGCCGTGACC
GGCTGA

Upstream 100 bases:

>100_bases
GGAGTTGACATCACATCAAACGCAGAGGGGTCCATTGACTTTAAGATGCCAGGATTTAAACTTTTCAATGTTCACAACCC
ACATGGATCAGGGAGGAATC

Downstream 100 bases:

>100_bases
TTGGAGCCAATCGCCAACGCCCGGCGTAACCCGCAAGGAAGTGAGATGACCTATGCAGACCGATGGCAATTTTTTTGTGA
AACTTGTGGGGATGTCCACG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: SOR [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNRRTFLKTAALGAVAAGITREAAAAAEKYFPVKADQSLFATINRAKDPAKKTPLEQKHAPVIKAPHAVKAGEPFTVEVT
VGEQVHPMGPTHWIEYIELNVGNEPAGRIAMQPRGFLHPKVTFTVVIPKEAAPAGKITLVAHQRCNLHGYWEGSLDVAVT
G

Sequences:

>Translated_161_residues
MNRRTFLKTAALGAVAAGITREAAAAAEKYFPVKADQSLFATINRAKDPAKKTPLEQKHAPVIKAPHAVKAGEPFTVEVT
VGEQVHPMGPTHWIEYIELNVGNEPAGRIAMQPRGFLHPKVTFTVVIPKEAAPAGKITLVAHQRCNLHGYWEGSLDVAVT
G
>Mature_161_residues
MNRRTFLKTAALGAVAAGITREAAAAAEKYFPVKADQSLFATINRAKDPAKKTPLEQKHAPVIKAPHAVKAGEPFTVEVT
VGEQVHPMGPTHWIEYIELNVGNEPAGRIAMQPRGFLHPKVTFTVVIPKEAAPAGKITLVAHQRCNLHGYWEGSLDVAVT
G

Specific function: Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide [H]

COG id: COG2033

COG function: function code C; Desulfoferrodoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the desulfoferrodoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002742 [H]

Pfam domain/function: PF01880 Desulfoferrodox [H]

EC number: =1.15.1.2 [H]

Molecular weight: Translated: 17350; Mature: 17350

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRTFLKTAALGAVAAGITREAAAAAEKYFPVKADQSLFATINRAKDPAKKTPLEQKHA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCC
PVIKAPHAVKAGEPFTVEVTVGEQVHPMGPTHWIEYIELNVGNEPAGRIAMQPRGFLHPK
CEEECCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCC
VTFTVVIPKEAAPAGKITLVAHQRCNLHGYWEGSLDVAVTG
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEC
>Mature Secondary Structure
MNRRTFLKTAALGAVAAGITREAAAAAEKYFPVKADQSLFATINRAKDPAKKTPLEQKHA
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCC
PVIKAPHAVKAGEPFTVEVTVGEQVHPMGPTHWIEYIELNVGNEPAGRIAMQPRGFLHPK
CEEECCCCCCCCCCEEEEEEECCEECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCC
VTFTVVIPKEAAPAGKITLVAHQRCNLHGYWEGSLDVAVTG
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]