| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223807
Identifier: 78223807
GI number: 78223807
Start: 2958469
End: 2958957
Strand: Reverse
Name: 78223807
Synonym: Gmet_2610
Alternate gene names: NA
Gene position: 2958957-2958469 (Counterclockwise)
Preceding gene: 78223808
Following gene: 78223805
Centisome position: 74.02
GC content: 66.46
Gene sequence:
>489_bases ATGAGGAAGAGGATAGGAGTGGTTGCCGCCGCGGGTCTGCTGATGGCGGCCCTTCTGGGAGAGGCCGCGGCCGCCCCCTG GGAGCGGCTCACCCCGGATGAGCGGCAGGTCCTGAAACCTTTTGAGGGGCGATGGGAGTCGCTTCCTCCGGAGCGGCAGG AGAGGCTTCGCCGGGGTGCCGAACGGTGGCGGACCATGACGCCGGAGGAGCGGGAGCAGGCCCGGGAACGGTCCCGAAAG TGGCGTGAGTTGCCACGGGAGGAAAGGGAACGGATCAGAAAACGGTTCGACGAGTTCAGTAAGCTCCCCCCCGCCGAACA GGAGCGGATCCGGCAGAGATACCGCTGGTTCAGGGAGCTGCCTCCCGAGGAGCGGGCGGCACTGCGCGAGAAGTGGCGGG GCCTGAGCCGCGAAGAGCGCCGTGAACTCCGGGACCGCTACCGGGCCATGACCCCGGAACAGAGAAAGGATTATCTGAAA CAACCATAG
Upstream 100 bases:
>100_bases ATCGAAATTGTTGCCGCCCAGGAGCAGATGCAGTTTTATGAAGATATCGAATTCTACCGCTGGCTGGCGGCCCAGGAGAA CGGCGGGTAAGGAGCGGGCG
Downstream 100 bases:
>100_bases ATTTAAGAGATAACCCCGACGGAACACGTCGGGGTTTTTTCATGATGAAACTACGATTCAGGGAATTTGATGCGTTTCCC GGCAAGAAAATCGTCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRKRIGVVAAAGLLMAALLGEAAAAPWERLTPDERQVLKPFEGRWESLPPERQERLRRGAERWRTMTPEEREQARERSRK WRELPREERERIRKRFDEFSKLPPAEQERIRQRYRWFRELPPEERAALREKWRGLSREERRELRDRYRAMTPEQRKDYLK QP
Sequences:
>Translated_162_residues MRKRIGVVAAAGLLMAALLGEAAAAPWERLTPDERQVLKPFEGRWESLPPERQERLRRGAERWRTMTPEEREQARERSRK WRELPREERERIRKRFDEFSKLPPAEQERIRQRYRWFRELPPEERAALREKWRGLSREERRELRDRYRAMTPEQRKDYLK QP >Mature_162_residues MRKRIGVVAAAGLLMAALLGEAAAAPWERLTPDERQVLKPFEGRWESLPPERQERLRRGAERWRTMTPEEREQARERSRK WRELPREERERIRKRFDEFSKLPPAEQERIRQRYRWFRELPPEERAALREKWRGLSREERRELRDRYRAMTPEQRKDYLK QP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19988; Mature: 19988
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRIGVVAAAGLLMAALLGEAAAAPWERLTPDERQVLKPFEGRWESLPPERQERLRRGA CCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH ERWRTMTPEEREQARERSRKWRELPREERERIRKRFDEFSKLPPAEQERIRQRYRWFREL HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PPEERAALREKWRGLSREERRELRDRYRAMTPEQRKDYLKQP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MRKRIGVVAAAGLLMAALLGEAAAAPWERLTPDERQVLKPFEGRWESLPPERQERLRRGA CCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH ERWRTMTPEEREQARERSRKWRELPREERERIRKRFDEFSKLPPAEQERIRQRYRWFREL HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PPEERAALREKWRGLSREERRELRDRYRAMTPEQRKDYLKQP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA