| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223805
Identifier: 78223805
GI number: 78223805
Start: 2956735
End: 2957451
Strand: Reverse
Name: 78223805
Synonym: Gmet_2608
Alternate gene names: NA
Gene position: 2957451-2956735 (Counterclockwise)
Preceding gene: 78223807
Following gene: 78223804
Centisome position: 73.98
GC content: 53.14
Gene sequence:
>717_bases ATGAAATCCATTTTATGCCTTCTGGCTGCCGGCCTGTTCACCGCCCTTTCATTTGCGTCCGCCGAGGCAATCTCTATCAC TGCTGACAAGGATGCCTACGTTCAGAGCGGAACCTCGGCCAATACTAATTTTGGGAGTGCCCTTGTCGATCAGGTTAAAC GTCAGGATAACTCCATTTATACCCGTAAAAGCTACTTCGGGTTTGATCTCAGCGGGCTGGGGCCGTATCCCATTGCATCG GCGACTCTCGATTTCAATTTTGTCGATAGTGGGGCGGGCACTACTCTCGCAGGCACAACGTACCAATTCGAAGTCTTCGG CCTGATCAATGAACTGTTTGACTCCTGGTCGGAATCCACCATAACCTGGAACAATGCCCCCGCGAATCGGACCAACAACG GTCTGAGCAACATGATGGTTGCCTCTCTCGGGACATTCAGCCTCACGGGCAAAGGGCTTGGCCTCCACTCCTTCACGAGC CCGGAGCTGATCGACTTCCTGAACAGCGACACAAACGATATGGCCACGTTCATCATCCGCAGGAATACCAATCAACCGAG TAATTCACAAAATTACGTTCACGCGTTCGCGTCCAGTGAAAACACATCCATAGCAGGCCCGACACTCAATGTCACGCCGG TCCCTGAGCCATCCACGCTTCTGTGCGTTGGTGCTGGCCTCATTGGCCTTGGACTCCTGAAGAGGCGTAGAGGCTAA
Upstream 100 bases:
>100_bases CAGCCAGCGATGACCAGTCATGATATTAGTAGGTTATGCGGAGGCACATTTCATGCAAATGCATGGACAAAATACCCCAA TTCTCCGCTGAGGTAACCCT
Downstream 100 bases:
>100_bases AGAGTGGCTGTTTGACACTACGTTGCCAGATATCTGGTGCAGTTCGGGCGAGAAGATAGCCCCGCTTCGCACCAGTTGAA GAGAAAGCCCGACCGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MKSILCLLAAGLFTALSFASAEAISITADKDAYVQSGTSANTNFGSALVDQVKRQDNSIYTRKSYFGFDLSGLGPYPIAS ATLDFNFVDSGAGTTLAGTTYQFEVFGLINELFDSWSESTITWNNAPANRTNNGLSNMMVASLGTFSLTGKGLGLHSFTS PELIDFLNSDTNDMATFIIRRNTNQPSNSQNYVHAFASSENTSIAGPTLNVTPVPEPSTLLCVGAGLIGLGLLKRRRG
Sequences:
>Translated_238_residues MKSILCLLAAGLFTALSFASAEAISITADKDAYVQSGTSANTNFGSALVDQVKRQDNSIYTRKSYFGFDLSGLGPYPIAS ATLDFNFVDSGAGTTLAGTTYQFEVFGLINELFDSWSESTITWNNAPANRTNNGLSNMMVASLGTFSLTGKGLGLHSFTS PELIDFLNSDTNDMATFIIRRNTNQPSNSQNYVHAFASSENTSIAGPTLNVTPVPEPSTLLCVGAGLIGLGLLKRRRG >Mature_238_residues MKSILCLLAAGLFTALSFASAEAISITADKDAYVQSGTSANTNFGSALVDQVKRQDNSIYTRKSYFGFDLSGLGPYPIAS ATLDFNFVDSGAGTTLAGTTYQFEVFGLINELFDSWSESTITWNNAPANRTNNGLSNMMVASLGTFSLTGKGLGLHSFTS PELIDFLNSDTNDMATFIIRRNTNQPSNSQNYVHAFASSENTSIAGPTLNVTPVPEPSTLLCVGAGLIGLGLLKRRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25312; Mature: 25312
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILCLLAAGLFTALSFASAEAISITADKDAYVQSGTSANTNFGSALVDQVKRQDNSIY CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEE TRKSYFGFDLSGLGPYPIASATLDFNFVDSGAGTTLAGTTYQFEVFGLINELFDSWSEST EECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCEEEEHHHHHHHHHHHCCCCCE ITWNNAPANRTNNGLSNMMVASLGTFSLTGKGLGLHSFTSPELIDFLNSDTNDMATFIIR EEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEE RNTNQPSNSQNYVHAFASSENTSIAGPTLNVTPVPEPSTLLCVGAGLIGLGLLKRRRG ECCCCCCCCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MKSILCLLAAGLFTALSFASAEAISITADKDAYVQSGTSANTNFGSALVDQVKRQDNSIY CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEE TRKSYFGFDLSGLGPYPIASATLDFNFVDSGAGTTLAGTTYQFEVFGLINELFDSWSEST EECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCEEEEHHHHHHHHHHHCCCCCE ITWNNAPANRTNNGLSNMMVASLGTFSLTGKGLGLHSFTSPELIDFLNSDTNDMATFIIR EEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEE RNTNQPSNSQNYVHAFASSENTSIAGPTLNVTPVPEPSTLLCVGAGLIGLGLLKRRRG ECCCCCCCCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA