| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78223692
Identifier: 78223692
GI number: 78223692
Start: 2832925
End: 2833722
Strand: Reverse
Name: 78223692
Synonym: Gmet_2490
Alternate gene names: NA
Gene position: 2833722-2832925 (Counterclockwise)
Preceding gene: 78223693
Following gene: 78223691
Centisome position: 70.89
GC content: 41.73
Gene sequence:
>798_bases ATGACAAAAGAGTCTGAAGGATACGAACGCCTTGTTAAGGATGTGCATGATGCGCTCCTTAAGAACGATGGCGTAGAGAA CATAACAGTATTGCAGAATGTGAAGCTCAGAGGTAAGAGTGGTGCGTCCCATCAAATCGACGTTTACTGGGAATTTCGTC TTGCTGGCGTGACGTATAAAACCTGTATTGAATGCAAGCAATTCAAGGAATCTGTTAAGAAATCTCATGTGGCTGCCTTC GCTTCAATTCTGGAGGACATAGGTAATGCAACAGGGATTTTTGCCACCACCGAAGGTTTTCAGAATGGAGCCAAACTGTT AGCCAAAGAGAAAGGCATCAGATTGATACTAGTGAACTACATCCTAAAGACCATCCACCTGACCGGTCACTTCAAAATAC CGCAAATATCTGTTACCAATCTGACGTTCGACACTGATCATGCAAAACAGCTGCTTCGCGAAAGAGGACTTCAAGTCTAT TCCTTACAAACACATGACATTTCAGGCCGAGAGCTGATATTTGACTCTCAAGGTACTCCGAAATGCAAGTTCAGAGATCT CTTTACACTATTGCCTACTGGTTCATCTCAAGAAATTGAGCCAGAAGATGCCTATTTCCCCACTGAAATAGGTAACCTGA AAATAAAATCGGCAGAATACACAGTTGCAGTGCATGAACATCAAACCGAAGACATTATTACAGTTGATGATGTCGCACGA GCAATAATGGAAGATGTATTTGAAAACAACTCTCTTTATCTTAGAGAAGACGGAAGTATTGAAGCAGTAAACAGATAA
Upstream 100 bases:
>100_bases GTTGACTAACTCAACGCTTAAATCAACAAATCAACTACGTCCCCTTCCCAGCCCCCAAGACCGCACACCCTCAGCCCCGT TATCTGGAGCATAAAATCGA
Downstream 100 bases:
>100_bases CCCTCGGGGTCTATCGGGGGACGTAGTTGATTAGTTGACTAACTCAACGCTTAAATCAACAAATCAACTACGTCCCCTTC CCAGCCCCCAAGGGGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTKESEGYERLVKDVHDALLKNDGVENITVLQNVKLRGKSGASHQIDVYWEFRLAGVTYKTCIECKQFKESVKKSHVAAF ASILEDIGNATGIFATTEGFQNGAKLLAKEKGIRLILVNYILKTIHLTGHFKIPQISVTNLTFDTDHAKQLLRERGLQVY SLQTHDISGRELIFDSQGTPKCKFRDLFTLLPTGSSQEIEPEDAYFPTEIGNLKIKSAEYTVAVHEHQTEDIITVDDVAR AIMEDVFENNSLYLREDGSIEAVNR
Sequences:
>Translated_265_residues MTKESEGYERLVKDVHDALLKNDGVENITVLQNVKLRGKSGASHQIDVYWEFRLAGVTYKTCIECKQFKESVKKSHVAAF ASILEDIGNATGIFATTEGFQNGAKLLAKEKGIRLILVNYILKTIHLTGHFKIPQISVTNLTFDTDHAKQLLRERGLQVY SLQTHDISGRELIFDSQGTPKCKFRDLFTLLPTGSSQEIEPEDAYFPTEIGNLKIKSAEYTVAVHEHQTEDIITVDDVAR AIMEDVFENNSLYLREDGSIEAVNR >Mature_264_residues TKESEGYERLVKDVHDALLKNDGVENITVLQNVKLRGKSGASHQIDVYWEFRLAGVTYKTCIECKQFKESVKKSHVAAFA SILEDIGNATGIFATTEGFQNGAKLLAKEKGIRLILVNYILKTIHLTGHFKIPQISVTNLTFDTDHAKQLLRERGLQVYS LQTHDISGRELIFDSQGTPKCKFRDLFTLLPTGSSQEIEPEDAYFPTEIGNLKIKSAEYTVAVHEHQTEDIITVDDVARA IMEDVFENNSLYLREDGSIEAVNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29821; Mature: 29690
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKESEGYERLVKDVHDALLKNDGVENITVLQNVKLRGKSGASHQIDVYWEFRLAGVTYK CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHH TCIECKQFKESVKKSHVAAFASILEDIGNATGIFATTEGFQNGAKLLAKEKGIRLILVNY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEEHHHH ILKTIHLTGHFKIPQISVTNLTFDTDHAKQLLRERGLQVYSLQTHDISGRELIFDSQGTP HHHHHEEECCEECCEEEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCC KCKFRDLFTLLPTGSSQEIEPEDAYFPTEIGNLKIKSAEYTVAVHEHQTEDIITVDDVAR CCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCEEEHHHHHH AIMEDVFENNSLYLREDGSIEAVNR HHHHHHHCCCCEEEEECCCEEECCC >Mature Secondary Structure TKESEGYERLVKDVHDALLKNDGVENITVLQNVKLRGKSGASHQIDVYWEFRLAGVTYK CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHH TCIECKQFKESVKKSHVAAFASILEDIGNATGIFATTEGFQNGAKLLAKEKGIRLILVNY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEEHHHH ILKTIHLTGHFKIPQISVTNLTFDTDHAKQLLRERGLQVYSLQTHDISGRELIFDSQGTP HHHHHEEECCEECCEEEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCC KCKFRDLFTLLPTGSSQEIEPEDAYFPTEIGNLKIKSAEYTVAVHEHQTEDIITVDDVAR CCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCEEEHHHHHH AIMEDVFENNSLYLREDGSIEAVNR HHHHHHHCCCCEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA