| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223686
Identifier: 78223686
GI number: 78223686
Start: 2825811
End: 2826296
Strand: Reverse
Name: 78223686
Synonym: Gmet_2483
Alternate gene names: NA
Gene position: 2826296-2825811 (Counterclockwise)
Preceding gene: 78223688
Following gene: 78223685
Centisome position: 70.7
GC content: 60.91
Gene sequence:
>486_bases ATGGACAAGCCAGCAAAGAACACGATTTGTCTTTGGTACGATGGCGACGCCGAGGACGCGGCGTGGTTTTACGCCCAGAC CTTTCCTGATTCGTCTGTCGGCGCGGTGTACCGCGCACCGGGAGACTTTCCGTCGGGGAAGAAAGGGGACGTGCTGACCG TCGAGTTTACGGTGATGGGCATCCCGTGCCTCGGGCTCAACGGCGGACCTGAGGTCAAGCACAACGAAGCGTTCTCGTTT CAGGTCGCAACCGTTGACCAGGCCGAAACGGATCGCTACTGGAACGCGATCGTCGGCAACGGCGGCCAGGAGAGCGTGTG CGGCTGGTGCAAGGACAAATGGGGAGTGTCCTGGCAGATTACGCCGATCGCCCTGACGAAGGCGGTCACTGATCCCGATA CCGCCACCGCCAAACGCGCGTTCGATGCGATGATGCAGATGAAAAAGATCGACATCGCCGCAATTGAGGCGGCGCGCCGC GGTTGA
Upstream 100 bases:
>100_bases TCGTACGTTGACGCGGAAATGTTGGCCAGCCAATGCCCCTCTGGCTGCGACACATTCGTTGCCTTCGGCCTAGGGTGGCT CATCTCGATGGAGGCGTGAC
Downstream 100 bases:
>100_bases GAGCCTGCGAATGCGTGGTGACCGTTAATGCCTCTTGATGTGGCTCCTCCTGATGTGTGACAATATATGGCCCGCAGTTT CCCGATATCAGCCGGTGCGA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MDKPAKNTICLWYDGDAEDAAWFYAQTFPDSSVGAVYRAPGDFPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNEAFSF QVATVDQAETDRYWNAIVGNGGQESVCGWCKDKWGVSWQITPIALTKAVTDPDTATAKRAFDAMMQMKKIDIAAIEAARR G
Sequences:
>Translated_161_residues MDKPAKNTICLWYDGDAEDAAWFYAQTFPDSSVGAVYRAPGDFPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNEAFSF QVATVDQAETDRYWNAIVGNGGQESVCGWCKDKWGVSWQITPIALTKAVTDPDTATAKRAFDAMMQMKKIDIAAIEAARR G >Mature_161_residues MDKPAKNTICLWYDGDAEDAAWFYAQTFPDSSVGAVYRAPGDFPSGKKGDVLTVEFTVMGIPCLGLNGGPEVKHNEAFSF QVATVDQAETDRYWNAIVGNGGQESVCGWCKDKWGVSWQITPIALTKAVTDPDTATAKRAFDAMMQMKKIDIAAIEAARR G
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17490; Mature: 17490
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPAKNTICLWYDGDAEDAAWFYAQTFPDSSVGAVYRAPGDFPSGKKGDVLTVEFTVMG CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEE IPCLGLNGGPEVKHNEAFSFQVATVDQAETDRYWNAIVGNGGQESVCGWCKDKWGVSWQI EEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHEEHEECCCCCCCHHHHHHHCCCCEEEE TPIALTKAVTDPDTATAKRAFDAMMQMKKIDIAAIEAARRG EHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHCCC >Mature Secondary Structure MDKPAKNTICLWYDGDAEDAAWFYAQTFPDSSVGAVYRAPGDFPSGKKGDVLTVEFTVMG CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEE IPCLGLNGGPEVKHNEAFSFQVATVDQAETDRYWNAIVGNGGQESVCGWCKDKWGVSWQI EEEECCCCCCCCCCCCEEEEEEEECCCCCCCHHEEHEECCCCCCCHHHHHHHCCCCEEEE TPIALTKAVTDPDTATAKRAFDAMMQMKKIDIAAIEAARRG EHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA