| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is fur [H]
Identifier: 78223648
GI number: 78223648
Start: 2769472
End: 2769903
Strand: Reverse
Name: fur [H]
Synonym: Gmet_2445
Alternate gene names: 78223648
Gene position: 2769903-2769472 (Counterclockwise)
Preceding gene: 78223649
Following gene: 78223647
Centisome position: 69.29
GC content: 58.56
Gene sequence:
>432_bases ATGAAACGGGTGAAACAGAAAATATTCCAGGACTATATTGCCAGGCAGGGTCTCAAGTCGACCCGCCAGCGCGACATCAT CCTCGACGCCTTTCTTTCCTCCGACCGGCACCTGAGCATCGAGGAACTGTACCTTAAGCTCAGGGCCAAGCATCCCAACA TCGGCTACGCCACGGTCTATCGCACCCTGAAGCTCTTCGCCGAGTCGGGAATCGCCCGGGAGATCCACTTCGGCGACGGC CAGACCCGCTACGAGCACGTCTCGGAGGGGGAGCACCACGACCACCTGGTATGCACGGGATGCGGCACCATCATCGAGTT TGAGAACGAGAGCATCGAAAAGCTCCAGGATGAGGTGGCGGCGGCCCACAACTTTCTCATCAAGCACCACAAGCTGGAAC TCTACGGCCTCTGCGCGAAATGCCGTTCGTAG
Upstream 100 bases:
>100_bases AAAGGAGTTCGCGACGGTTCCGGAATTTACATGCAGAAAGAGATTGACAGAATGCGTGTCCGTGTCCTATATTGAAAATC ACTTTCAGCTCGGAGCGGAA
Downstream 100 bases:
>100_bases TCCGTTCGTACGCGACGGAAAATTTCTGTCGTGTCTTTTTTTGCTTGTGTGATTGAAAGTGAATATCAATAGCATAATTT CATGAAGGAGTGACCATAGA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKRVKQKIFQDYIARQGLKSTRQRDIILDAFLSSDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREIHFGDG QTRYEHVSEGEHHDHLVCTGCGTIIEFENESIEKLQDEVAAAHNFLIKHHKLELYGLCAKCRS
Sequences:
>Translated_143_residues MKRVKQKIFQDYIARQGLKSTRQRDIILDAFLSSDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREIHFGDG QTRYEHVSEGEHHDHLVCTGCGTIIEFENESIEKLQDEVAAAHNFLIKHHKLELYGLCAKCRS >Mature_143_residues MKRVKQKIFQDYIARQGLKSTRQRDIILDAFLSSDRHLSIEELYLKLRAKHPNIGYATVYRTLKLFAESGIAREIHFGDG QTRYEHVSEGEHHDHLVCTGCGTIIEFENESIEKLQDEVAAAHNFLIKHHKLELYGLCAKCRS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=133, Percent_Identity=42.1052631578947, Blast_Score=97, Evalue=4e-22,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16538; Mature: 16538
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVKQKIFQDYIARQGLKSTRQRDIILDAFLSSDRHLSIEELYLKLRAKHPNIGYATVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHH RTLKLFAESGIAREIHFGDGQTRYEHVSEGEHHDHLVCTGCGTIIEFENESIEKLQDEVA HHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHH AAHNFLIKHHKLELYGLCAKCRS HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRVKQKIFQDYIARQGLKSTRQRDIILDAFLSSDRHLSIEELYLKLRAKHPNIGYATVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHH RTLKLFAESGIAREIHFGDGQTRYEHVSEGEHHDHLVCTGCGTIIEFENESIEKLQDEVA HHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHH AAHNFLIKHHKLELYGLCAKCRS HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]