| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223567
Identifier: 78223567
GI number: 78223567
Start: 2671623
End: 2672864
Strand: Reverse
Name: 78223567
Synonym: Gmet_2364
Alternate gene names: NA
Gene position: 2672864-2671623 (Counterclockwise)
Preceding gene: 78223568
Following gene: 78223566
Centisome position: 66.86
GC content: 61.76
Gene sequence:
>1242_bases ATGGCACTGATCAAACCTTTCCGGGCACTGCGCCCGCCAAAATCTCTGGCCGAGAAGGTCGCAGCGCTTCCCTATGACGT CATGAACGTCGAGGAGGCGAAGGCCATGGCTGCTGGCAATCCGTACAGTTTTCTCCATGTCTCCCGTCCCGAGATCGATC TTCCGGCGGAGGTGGACCCCTATGCCGAGGAGGTTTACGTGAAGGGGCGCGAGAACATGCAGCGCTTCATCGCCGAGGGA ACTCTTATCCTGGACCGGGACGAGTGTTACTACGTCTATCGCCAGAGGATGGGGGCCATCGAGCAGACGGGCCTCGTGGT CTGTGCCGGTGTGGACGATTACGAGAGCGGCGTCATTAAGAAGCATGAGCTGACCCGTGCCGACAAGGAAGAGGACCGGG TCAGGCATATCGATTACCTGGATGCCAACGACGAGCCGGTGTTTTACACCTACCGTAACGACCCCGCCATAACCGCCATC GTGGCCGGCGTGGCCGCCGGTGAACCTACCTATCATTTCACCACCGACGATGGGGTCATCCACACCCTCTGGATCATCAG CGACCGGGCGGTCATCGATGATCTCACGACGCGGTTTGCCGCCATCGAAACCCTCTACGTCGCCGACGGCCATCACCGGA GCGCCGCTGCCGGCCGTGTGCGGGAACTGCGGCGTGCCGCCAATCCCGGCCACACGGGAAACGAGGAGTATAACTGGTTC CTCACGGTCATCTTCCCCGACAGCGAGATGAACATCATGCCCTACAACCGGGCGGTGAAGGACCTGAACGGCCACTCCGT TGCCGAGTTGATGGCCCGCATCGGCGAGCGCTTTGCCATAACGCCGGCGACCGGGGGATTCGCGCCGTCCCAGCGGCACG AATTCGGCATGTACCTTGAGGGGCGTTGGTATCAGCTCGTCGCCAAGGAGGGAACCTTCGACGAGGGGGATGCGGTGTCG CACCTGGATGTCTCCATCCTCCAGAACAATCTCCTGAGTCCGATTCTCGCCATCCGCAACCCCCGCACCGACCAGCGGAT CTCCTTTGTGGGGGGAATCCGGGGGACCGACGAACTGGAGCGGCTCGTGGATGGCGGGGGCTATCGGATCGCCTTCTCTC TCAACCCCACCTCCATGGAAGAACTCATGCAGCTGGCCGATGCCGGGCAGATAATGCCCCCCAAGTCCACCTGGTTCGAA CCGAAACTGCGCAGCGGGCTCTTTGTCCACCAGCTCTCGTAG
Upstream 100 bases:
>100_bases TCAAGATCTCATCCCTCGACGAGAACTACTTTGCGAAGAAGTTCATGGGTGGACGCAGGTATTTCTAATTCAGATGAAGT TTCGAAAATGAGGTAATTTC
Downstream 100 bases:
>100_bases CAGGATGACCGTGATACGCGAGCGCCGTTTCTGGCTCTTCAAAAGCGAGCCTTCCTGTTTCTCCTTCGATGACTTGAAGG CGCGCCCCAACGGCACCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MALIKPFRALRPPKSLAEKVAALPYDVMNVEEAKAMAAGNPYSFLHVSRPEIDLPAEVDPYAEEVYVKGRENMQRFIAEG TLILDRDECYYVYRQRMGAIEQTGLVVCAGVDDYESGVIKKHELTRADKEEDRVRHIDYLDANDEPVFYTYRNDPAITAI VAGVAAGEPTYHFTTDDGVIHTLWIISDRAVIDDLTTRFAAIETLYVADGHHRSAAAGRVRELRRAANPGHTGNEEYNWF LTVIFPDSEMNIMPYNRAVKDLNGHSVAELMARIGERFAITPATGGFAPSQRHEFGMYLEGRWYQLVAKEGTFDEGDAVS HLDVSILQNNLLSPILAIRNPRTDQRISFVGGIRGTDELERLVDGGGYRIAFSLNPTSMEELMQLADAGQIMPPKSTWFE PKLRSGLFVHQLS
Sequences:
>Translated_413_residues MALIKPFRALRPPKSLAEKVAALPYDVMNVEEAKAMAAGNPYSFLHVSRPEIDLPAEVDPYAEEVYVKGRENMQRFIAEG TLILDRDECYYVYRQRMGAIEQTGLVVCAGVDDYESGVIKKHELTRADKEEDRVRHIDYLDANDEPVFYTYRNDPAITAI VAGVAAGEPTYHFTTDDGVIHTLWIISDRAVIDDLTTRFAAIETLYVADGHHRSAAAGRVRELRRAANPGHTGNEEYNWF LTVIFPDSEMNIMPYNRAVKDLNGHSVAELMARIGERFAITPATGGFAPSQRHEFGMYLEGRWYQLVAKEGTFDEGDAVS HLDVSILQNNLLSPILAIRNPRTDQRISFVGGIRGTDELERLVDGGGYRIAFSLNPTSMEELMQLADAGQIMPPKSTWFE PKLRSGLFVHQLS >Mature_412_residues ALIKPFRALRPPKSLAEKVAALPYDVMNVEEAKAMAAGNPYSFLHVSRPEIDLPAEVDPYAEEVYVKGRENMQRFIAEGT LILDRDECYYVYRQRMGAIEQTGLVVCAGVDDYESGVIKKHELTRADKEEDRVRHIDYLDANDEPVFYTYRNDPAITAIV AGVAAGEPTYHFTTDDGVIHTLWIISDRAVIDDLTTRFAAIETLYVADGHHRSAAAGRVRELRRAANPGHTGNEEYNWFL TVIFPDSEMNIMPYNRAVKDLNGHSVAELMARIGERFAITPATGGFAPSQRHEFGMYLEGRWYQLVAKEGTFDEGDAVSH LDVSILQNNLLSPILAIRNPRTDQRISFVGGIRGTDELERLVDGGGYRIAFSLNPTSMEELMQLADAGQIMPPKSTWFEP KLRSGLFVHQLS
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46300; Mature: 46169
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIKPFRALRPPKSLAEKVAALPYDVMNVEEAKAMAAGNPYSFLHVSRPEIDLPAEVDP CCCCCCHHHCCCHHHHHHHHHHCCHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC YAEEVYVKGRENMQRFIAEGTLILDRDECYYVYRQRMGAIEQTGLVVCAGVDDYESGVIK CHHHEEECCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCHHCCCEE KHELTRADKEEDRVRHIDYLDANDEPVFYTYRNDPAITAIVAGVAAGEPTYHFTTDDGVI HHHHHCCCCHHHHHHEEEEECCCCCEEEEEECCCCCEEHHHHHHHCCCCCEEEECCCCEE HTLWIISDRAVIDDLTTRFAAIETLYVADGHHRSAAAGRVRELRRAANPGHTGNEEYNWF EEEEEEECCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE LTVIFPDSEMNIMPYNRAVKDLNGHSVAELMARIGERFAITPATGGFAPSQRHEFGMYLE EEEEECCCCCEEECCHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEC GRWYQLVAKEGTFDEGDAVSHLDVSILQNNLLSPILAIRNPRTDQRISFVGGIRGTDELE CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH RLVDGGGYRIAFSLNPTSMEELMQLADAGQIMPPKSTWFEPKLRSGLFVHQLS HHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECC >Mature Secondary Structure ALIKPFRALRPPKSLAEKVAALPYDVMNVEEAKAMAAGNPYSFLHVSRPEIDLPAEVDP CCCCCHHHCCCHHHHHHHHHHCCHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC YAEEVYVKGRENMQRFIAEGTLILDRDECYYVYRQRMGAIEQTGLVVCAGVDDYESGVIK CHHHEEECCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCEEEEECCCCHHCCCEE KHELTRADKEEDRVRHIDYLDANDEPVFYTYRNDPAITAIVAGVAAGEPTYHFTTDDGVI HHHHHCCCCHHHHHHEEEEECCCCCEEEEEECCCCCEEHHHHHHHCCCCCEEEECCCCEE HTLWIISDRAVIDDLTTRFAAIETLYVADGHHRSAAAGRVRELRRAANPGHTGNEEYNWF EEEEEEECCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE LTVIFPDSEMNIMPYNRAVKDLNGHSVAELMARIGERFAITPATGGFAPSQRHEFGMYLE EEEEECCCCCEEECCHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEC GRWYQLVAKEGTFDEGDAVSHLDVSILQNNLLSPILAIRNPRTDQRISFVGGIRGTDELE CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH RLVDGGGYRIAFSLNPTSMEELMQLADAGQIMPPKSTWFEPKLRSGLFVHQLS HHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA