| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is engA
Identifier: 78223517
GI number: 78223517
Start: 2622411
End: 2623730
Strand: Reverse
Name: engA
Synonym: Gmet_2314
Alternate gene names: 78223517
Gene position: 2623730-2622411 (Counterclockwise)
Preceding gene: 78223518
Following gene: 78223516
Centisome position: 65.64
GC content: 61.67
Gene sequence:
>1320_bases ATGATGCCACTCGTTGCCATAGTGGGTCGCCCCAACGTGGGGAAATCGACCCTGTTCAACCGTCTCGTGGGGCGCCGCAA GGCCATTGTCGACGACATGCCCGGCGTCACCCGGGACCGGAACTACGAAACCGTCACCCGCTTCGAGGCGCCGTTCATTC TCATCGACACCGGCGGCTTCGAGCCGGTGAGCGAAGACCGGCTCCTGCAGCAGATGAGGGAGCAGTCCCAGCTCGCCATG GAGGAGGCGGACGTCATCATCTTCCTCATGGATGGCCGGGCCGGGCTCACCCCATCCGACGTGGAGGTGGTGGAGATGCT CCGTCGGGTGAAAAAGCCCGTTTTCTTCGTGGTCAACAAGGTGGACGGCGAAAAGATCGAGAACGAGGCGGCCGATTTCT ACACCCTGGGGATCGGCACCCTTCACACCATCTCCGCCGAGCACAACCGGGGGGTGAACGACCTCATGGAGGAGGTGGTG GCGGCCCTTCCCAAAAGCTCGACCCGCCTTGATGACGAGGATATCACCCGGATCGCCGTGGTGGGGCGCCCCAACGTGGG GAAGTCGTCCCTGGTGAACCGGCTCCTCGGTTTCGAGCGGGTGGTGGCCAACCCCACCCCCGGCACCACCCGGGATTCCG TCGATACTCTCTTCGCCTGCAACAAGAAGCGCTACCTCCTCATCGACACGGCCGGCATCCGGCGCAAAGGTAAGACCACC CAGAAGCTGGAGAAGTACAGCGTGGTGGACAGCCTGCGGAGTATCGAGCGGGCCGACGTGGTGCTCATCATCATCAATGC CGAGGAAGGGGTGACGGAACAGGACGAGCGGATCGCCGGCTACGCCTTTGAGGCGGGCAAGGCCTGCATCTTCGTGGTCA ACAAGTGGGATACCCTGGCCAAGGACAACAGCACCCTTGGGAAATTCGTCGACCAGATCAAGACGGAATTCAAGTATCTC TCATTCGCGCCGATAGTATTTGTATCAGCCAAGAGTGGCCAGCGGATCAACCGGGTCATGGAGGAGGTGGAGCGGGTCAT GGCCCAGTATTCCAAGCGGGTAAGCACCTCCGACCTGAACCGGGTCTTCTCCGAGGCGGTGGAGAAACACCACGCCCCCC TTTCCCACGGGCGGCGGGTGAAGTTCTACTTCGCCACTCAGGTGGGGACGAAGCCGCCGACATTCGTACTGTTCACCAAT CAGCCGGAGGGGGTGCATTTTTCCTACGAGCGGTACCTCATGAACAAGTTCCGCGAGGCGTTCGATTTCACCGGCAGCCC GCTCAAGATCATCTTCCGGGGCAGGGATCGCCGGGAGTAA
Upstream 100 bases:
>100_bases TCGAGAAACTACTCAATACGAAAGTTTTCCTGGAACTCTTCGTCCGGGTCCGCAAGGACTGGAGCGAAGACGAGCGGATG CTGAAGGAGCTTGGATACAC
Downstream 100 bases:
>100_bases ACGTGCTTTACTTGAACCGGACGAGTAGTTTATGATGAGCGCCGTTTCTACCACTGTTTTCCGGGTTTTTGACCCTCTCA TGCCATGAGCCTTGTCGGGA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGFEPVSEDRLLQQMREQSQLAM EEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNKVDGEKIENEAADFYTLGIGTLHTISAEHNRGVNDLMEEVV AALPKSSTRLDDEDITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIRRKGKTT QKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIFVVNKWDTLAKDNSTLGKFVDQIKTEFKYL SFAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLNRVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTN QPEGVHFSYERYLMNKFREAFDFTGSPLKIIFRGRDRRE
Sequences:
>Translated_439_residues MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGFEPVSEDRLLQQMREQSQLAM EEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNKVDGEKIENEAADFYTLGIGTLHTISAEHNRGVNDLMEEVV AALPKSSTRLDDEDITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIRRKGKTT QKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIFVVNKWDTLAKDNSTLGKFVDQIKTEFKYL SFAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLNRVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTN QPEGVHFSYERYLMNKFREAFDFTGSPLKIIFRGRDRRE >Mature_439_residues MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGFEPVSEDRLLQQMREQSQLAM EEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNKVDGEKIENEAADFYTLGIGTLHTISAEHNRGVNDLMEEVV AALPKSSTRLDDEDITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIRRKGKTT QKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIFVVNKWDTLAKDNSTLGKFVDQIKTEFKYL SFAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLNRVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTN QPEGVHFSYERYLMNKFREAFDFTGSPLKIIFRGRDRRE
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=463, Percent_Identity=42.3326133909287, Blast_Score=366, Evalue=1e-102, Organism=Escherichia coli, GI1788919, Length=181, Percent_Identity=30.939226519337, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI2367268, Length=155, Percent_Identity=34.8387096774194, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17507259, Length=91, Percent_Identity=36.2637362637363, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=169, Percent_Identity=31.9526627218935, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_GEOMG (Q39T85)
Other databases:
- EMBL: CP000148 - RefSeq: YP_385264.1 - ProteinModelPortal: Q39T85 - SMR: Q39T85 - STRING: Q39T85 - GeneID: 3740469 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_2314 - NMPDR: fig|269799.3.peg.2558 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: KCEKAFD - PhylomeDB: Q39T85 - ProtClustDB: PRK00093 - BioCyc: GMET269799:GMET_2314-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49604; Mature: 49604
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCEEEEECCCC EPVSEDRLLQQMREQSQLAMEEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNK CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEC VDGEKIENEAADFYTLGIGTLHTISAEHNRGVNDLMEEVVAALPKSSTRLDDEDITRIAV CCCHHHHHCCCCEEEECCCCEEEECCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIRRKGKTT ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHH QKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIFVVNKWDTLA HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHEEEEEECCCEEEEEEECCCHHH KDNSTLGKFVDQIKTEFKYLSFAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLN CCCCHHHHHHHHHHHHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH RVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTNQPEGVHFSYERYLMNKFREA HHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHH FDFTGSPLKIIFRGRDRRE HCCCCCCEEEEEECCCCCC >Mature Secondary Structure MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGF CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCCEEEEECCCC EPVSEDRLLQQMREQSQLAMEEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNK CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEC VDGEKIENEAADFYTLGIGTLHTISAEHNRGVNDLMEEVVAALPKSSTRLDDEDITRIAV CCCHHHHHCCCCEEEECCCCEEEECCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIRRKGKTT ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHH QKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIFVVNKWDTLA HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHEEEEEECCCEEEEEEECCCHHH KDNSTLGKFVDQIKTEFKYLSFAPIVFVSAKSGQRINRVMEEVERVMAQYSKRVSTSDLN CCCCHHHHHHHHHHHHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH RVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTNQPEGVHFSYERYLMNKFREA HHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHH FDFTGSPLKIIFRGRDRRE HCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA