Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is yhjX [C]

Identifier: 78223456

GI number: 78223456

Start: 2547381

End: 2548706

Strand: Reverse

Name: yhjX [C]

Synonym: Gmet_2251

Alternate gene names: 78223456

Gene position: 2548706-2547381 (Counterclockwise)

Preceding gene: 78223457

Following gene: 78223455

Centisome position: 63.76

GC content: 49.7

Gene sequence:

>1326_bases
ATGGCACAGCAAGCCACGAGGTTTTACGGATGGACGCTGGTCGGGATGTTTTTTGGAATTTATTTTCTGAATGCTACCTT
TCCCTACGTTGGCGCAAGTGTAATTAACAGCTATATGGCTGAAAGTATTGGAATAACTAAAAGTATCGTTGGACTTGGAT
TTTCCCTTTTTGTCCTCTCCTCGGCGCTTTCTGGGCCACTGGTGGCGTACTGCGTCAACAAAAAAGGTATTCGTTTTACC
CTTGCCTCAGGCGGGCTGATCGTGGCTTTTGGGGCGTTGCTTATGGCGCTGACGGTATCGAAGGGATGGCAGTATGTTCT
GACTTTTGGGGTTGTTATTGGTACAGGCGTTGGTTTGGGTACGGTTATCCCCATACAGACCGGTGTGACCAATTGGTTTG
TCAGGCGAAGAGCTCTTGCCATGTCTATTGCGCTTTCGGCAGCCGGCTTCGGCTCGTTCATTGCAGCTCCACTTTTGAAT
AAAATCATTGCCGCTTCCAACGGTAACTGGAAAAACGGCTGGTTGGTAGTTGTGGCCACCGGTTTGGCAGCTGCAACTAT
AGCTGCTGGGGGGGTCAGAAACACTCCGGCTTCAATGGGACAGTTTCCTGATGGGGTGCCGCCGGGAAAAAGCTCTGAAA
ACACTGCCCGCAATGCGCAGGTCCGCTCCTCGCGGATATATCAATCGAGCGAATTTTGGCCTGTCAGGGAAGTATTAAAA
ACGAAAATATTCTGGTTGATCATTATTGCCTCTTTCAGTTTTCTTGCCGTCTTTAATACATGTGTCGCTCATGGTGTGAT
TCATTTGCGCAGCCTTGGACATTCTCCGCAGTTTGCTGCCCTGTCCGCCGGTTTGTTACTGCTTTGCAGTGTAGGCGGCA
AGTTGTTTGCCGGTATTTTAGGTGATCGTATAGAGCCGCGGTTTATCTTAAGTGCGGCTGTGTTTTCGACCCTGCTGGGA
GCAGTTGCGCTTGCAAATGCCACTAATACTGCCGTGGTTTACCTTTACGCCTGCTGCGTTGGGGTCGGTTTTGGTGCAAG
CTTCGTTGCCATGCCGACAATTTTGGCCAACTATTATGGCGTCAAATCTTTTGCCCCACTCATGGGAGTGGCCCTTCCCC
TTACAAATGGGGGCAGTGCTATTGCACCACTTTTAGCCGGGATCGTCTACGATCGTTTCGGCAGCTATGTATTGGCCTTA
TACGGAGGGGCGACTATCGCTCTTCTGGGAGCTATTCTAGTATTATTTGCCAAGCCTCCCGTATCGAATGCTGTGGTAAC
TGTTGAAAGTAAGCTTGATGATAAAATCGGGGCGGATTTCTCCTAG

Upstream 100 bases:

>100_bases
GAAAAGTTCAAAAATTCAAATTACGTGAAATTGGTGTGAAGGAATTCAATTTGCCTTCGACAAATTGAAAGTCTTATATC
AGCTTTAAGCAGGAGGCGCA

Downstream 100 bases:

>100_bases
TTGAGAGGGGTTTAATTTCTCAGCCAAAGAAATGCAACATCCTGCCAAATTGATCACTCCTGGCAAACGTGCACCAAATG
ATCCGGTTCTTCTGGGGGGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Oxalate/Formate Antiporter; MFS Permease; MFS Family Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MAQQATRFYGWTLVGMFFGIYFLNATFPYVGASVINSYMAESIGITKSIVGLGFSLFVLSSALSGPLVAYCVNKKGIRFT
LASGGLIVAFGALLMALTVSKGWQYVLTFGVVIGTGVGLGTVIPIQTGVTNWFVRRRALAMSIALSAAGFGSFIAAPLLN
KIIAASNGNWKNGWLVVVATGLAAATIAAGGVRNTPASMGQFPDGVPPGKSSENTARNAQVRSSRIYQSSEFWPVREVLK
TKIFWLIIIASFSFLAVFNTCVAHGVIHLRSLGHSPQFAALSAGLLLLCSVGGKLFAGILGDRIEPRFILSAAVFSTLLG
AVALANATNTAVVYLYACCVGVGFGASFVAMPTILANYYGVKSFAPLMGVALPLTNGGSAIAPLLAGIVYDRFGSYVLAL
YGGATIALLGAILVLFAKPPVSNAVVTVESKLDDKIGADFS

Sequences:

>Translated_441_residues
MAQQATRFYGWTLVGMFFGIYFLNATFPYVGASVINSYMAESIGITKSIVGLGFSLFVLSSALSGPLVAYCVNKKGIRFT
LASGGLIVAFGALLMALTVSKGWQYVLTFGVVIGTGVGLGTVIPIQTGVTNWFVRRRALAMSIALSAAGFGSFIAAPLLN
KIIAASNGNWKNGWLVVVATGLAAATIAAGGVRNTPASMGQFPDGVPPGKSSENTARNAQVRSSRIYQSSEFWPVREVLK
TKIFWLIIIASFSFLAVFNTCVAHGVIHLRSLGHSPQFAALSAGLLLLCSVGGKLFAGILGDRIEPRFILSAAVFSTLLG
AVALANATNTAVVYLYACCVGVGFGASFVAMPTILANYYGVKSFAPLMGVALPLTNGGSAIAPLLAGIVYDRFGSYVLAL
YGGATIALLGAILVLFAKPPVSNAVVTVESKLDDKIGADFS
>Mature_440_residues
AQQATRFYGWTLVGMFFGIYFLNATFPYVGASVINSYMAESIGITKSIVGLGFSLFVLSSALSGPLVAYCVNKKGIRFTL
ASGGLIVAFGALLMALTVSKGWQYVLTFGVVIGTGVGLGTVIPIQTGVTNWFVRRRALAMSIALSAAGFGSFIAAPLLNK
IIAASNGNWKNGWLVVVATGLAAATIAAGGVRNTPASMGQFPDGVPPGKSSENTARNAQVRSSRIYQSSEFWPVREVLKT
KIFWLIIIASFSFLAVFNTCVAHGVIHLRSLGHSPQFAALSAGLLLLCSVGGKLFAGILGDRIEPRFILSAAVFSTLLGA
VALANATNTAVVYLYACCVGVGFGASFVAMPTILANYYGVKSFAPLMGVALPLTNGGSAIAPLLAGIVYDRFGSYVLALY
GGATIALLGAILVLFAKPPVSNAVVTVESKLDDKIGADFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45935; Mature: 45804

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQATRFYGWTLVGMFFGIYFLNATFPYVGASVINSYMAESIGITKSIVGLGFSLFVLS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SALSGPLVAYCVNKKGIRFTLASGGLIVAFGALLMALTVSKGWQYVLTFGVVIGTGVGLG
HHHCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
TVIPIQTGVTNWFVRRRALAMSIALSAAGFGSFIAAPLLNKIIAASNGNWKNGWLVVVAT
EEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GLAAATIAAGGVRNTPASMGQFPDGVPPGKSSENTARNAQVRSSRIYQSSEFWPVREVLK
CHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
TKIFWLIIIASFSFLAVFNTCVAHGVIHLRSLGHSPQFAALSAGLLLLCSVGGKLFAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GDRIEPRFILSAAVFSTLLGAVALANATNTAVVYLYACCVGVGFGASFVAMPTILANYYG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
VKSFAPLMGVALPLTNGGSAIAPLLAGIVYDRFGSYVLALYGGATIALLGAILVLFAKPP
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VSNAVVTVESKLDDKIGADFS
CCCEEEEEECHHCCCCCCCCC
>Mature Secondary Structure 
AQQATRFYGWTLVGMFFGIYFLNATFPYVGASVINSYMAESIGITKSIVGLGFSLFVLS
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SALSGPLVAYCVNKKGIRFTLASGGLIVAFGALLMALTVSKGWQYVLTFGVVIGTGVGLG
HHHCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
TVIPIQTGVTNWFVRRRALAMSIALSAAGFGSFIAAPLLNKIIAASNGNWKNGWLVVVAT
EEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GLAAATIAAGGVRNTPASMGQFPDGVPPGKSSENTARNAQVRSSRIYQSSEFWPVREVLK
CHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
TKIFWLIIIASFSFLAVFNTCVAHGVIHLRSLGHSPQFAALSAGLLLLCSVGGKLFAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GDRIEPRFILSAAVFSTLLGAVALANATNTAVVYLYACCVGVGFGASFVAMPTILANYYG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
VKSFAPLMGVALPLTNGGSAIAPLLAGIVYDRFGSYVLALYGGATIALLGAILVLFAKPP
HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VSNAVVTVESKLDDKIGADFS
CCCEEEEEECHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA