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The map label for this gene is dsbC [H]

Identifier: 78223455

GI number: 78223455

Start: 2546458

End: 2547312

Strand: Reverse

Name: dsbC [H]

Synonym: Gmet_2250

Alternate gene names: 78223455

Gene position: 2547312-2546458 (Counterclockwise)

Preceding gene: 78223456

Following gene: 78223454

Centisome position: 63.72

GC content: 47.72

Gene sequence:

>855_bases
GTGCACCAAATGATCCGGTTCTTCTGGGGGGGCAATATGAAATGGTTGATGAGAATTCTCCTGCCGTTTGCGTTTGTATC
GACGGCATATGGTTTCGGAACGGGAACGGAAGGATGTAGTGGAAACTGCATAGCCTGCCACACTATCAAGAAGGAAGAGG
TCGTAGCCTTGGTTAAGAATGTTGACCCTGCTACTACGGTAGAATCGGTCGGGCCTTCTCCCGTGCGGGGATTATTTGAA
ATAATAATAAGACATAATGATAGCACTGGCATCATATATCTTGATTTTTCGAAGAAATTCCTCATTGCAGGCAGAATACT
TGATACTGGCAGCAAGAAAGACGTAACCGCAACCGCCCTTAATCGGGTGCGGCGTATTGACCCATCAAAACTCCCGCTTG
ACAATGCTCTCGTCCTCGGTAACGCAACTGGCAGCAGAAATATTTATGTCTTCACCGACCCGGAATGTCCGTTTTGCGCC
AAGTTCCATCGGGAGCTTGTTGCACTGACCAAAGAGGACCCGCAGTTAGGGGTCCGTATCATACTTACTCCTCTTGATAT
TCATCCCCGAGCTTCTGCTGTAACCAACTCCATTTTGTGCGCGGCACAGGACGGAATGGATAAAGGGCTGCGACTTCTGG
AAGAAAGTTTCAATGGTACTGCGATTGCAGATATAACCTGCGGCAGGGACTATGCCGAAGAAGGGAAAACTCTGTTCAAA
GAACTGAGAATTCGCATGACGCCCACTACCGTTTTATCCGATGGGCGGGTCGTAGATGGTGTAAAGACGGGCGCTGAAAT
TGAGAAACTTTTCGATGATACTGAGCATGGAGTCATTACAGAAAAACCACAATAA

Upstream 100 bases:

>100_bases
TTGATGATAAAATCGGGGCGGATTTCTCCTAGTTGAGAGGGGTTTAATTTCTCAGCCAAAGAAATGCAACATCCTGCCAA
ATTGATCACTCCTGGCAAAC

Downstream 100 bases:

>100_bases
AGTAGAAAGAAAATTTTTATCCGCGGTTTTAGGGACTTGTGTCACTAAGAAACAGTAAGGAGAGTATCAATGGGAAAACT
TGACGGCAAAGTGGCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MHQMIRFFWGGNMKWLMRILLPFAFVSTAYGFGTGTEGCSGNCIACHTIKKEEVVALVKNVDPATTVESVGPSPVRGLFE
IIIRHNDSTGIIYLDFSKKFLIAGRILDTGSKKDVTATALNRVRRIDPSKLPLDNALVLGNATGSRNIYVFTDPECPFCA
KFHRELVALTKEDPQLGVRIILTPLDIHPRASAVTNSILCAAQDGMDKGLRLLEESFNGTAIADITCGRDYAEEGKTLFK
ELRIRMTPTTVLSDGRVVDGVKTGAEIEKLFDDTEHGVITEKPQ

Sequences:

>Translated_284_residues
MHQMIRFFWGGNMKWLMRILLPFAFVSTAYGFGTGTEGCSGNCIACHTIKKEEVVALVKNVDPATTVESVGPSPVRGLFE
IIIRHNDSTGIIYLDFSKKFLIAGRILDTGSKKDVTATALNRVRRIDPSKLPLDNALVLGNATGSRNIYVFTDPECPFCA
KFHRELVALTKEDPQLGVRIILTPLDIHPRASAVTNSILCAAQDGMDKGLRLLEESFNGTAIADITCGRDYAEEGKTLFK
ELRIRMTPTTVLSDGRVVDGVKTGAEIEKLFDDTEHGVITEKPQ
>Mature_284_residues
MHQMIRFFWGGNMKWLMRILLPFAFVSTAYGFGTGTEGCSGNCIACHTIKKEEVVALVKNVDPATTVESVGPSPVRGLFE
IIIRHNDSTGIIYLDFSKKFLIAGRILDTGSKKDVTATALNRVRRIDPSKLPLDNALVLGNATGSRNIYVFTDPECPFCA
KFHRELVALTKEDPQLGVRIILTPLDIHPRASAVTNSILCAAQDGMDKGLRLLEESFNGTAIADITCGRDYAEEGKTLFK
ELRIRMTPTTVLSDGRVVDGVKTGAEIEKLFDDTEHGVITEKPQ

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioredoxin family. DsbC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018950
- InterPro:   IPR009094
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF10411 DsbC_N [H]

EC number: 5.3.4.1

Molecular weight: Translated: 31216; Mature: 31216

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQMIRFFWGGNMKWLMRILLPFAFVSTAYGFGTGTEGCSGNCIACHTIKKEEVVALVKN
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
VDPATTVESVGPSPVRGLFEIIIRHNDSTGIIYLDFSKKFLIAGRILDTGSKKDVTATAL
CCCCHHHHHCCCHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHH
NRVRRIDPSKLPLDNALVLGNATGSRNIYVFTDPECPFCAKFHRELVALTKEDPQLGVRI
HHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE
ILTPLDIHPRASAVTNSILCAAQDGMDKGLRLLEESFNGTAIADITCGRDYAEEGKTLFK
EEEECCCCCCHHHHHHHEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
ELRIRMTPTTVLSDGRVVDGVKTGAEIEKLFDDTEHGVITEKPQ
HHHEEECCCEEECCCEEECCHHCCHHHHHHHCCCCCCEEECCCC
>Mature Secondary Structure
MHQMIRFFWGGNMKWLMRILLPFAFVSTAYGFGTGTEGCSGNCIACHTIKKEEVVALVKN
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHC
VDPATTVESVGPSPVRGLFEIIIRHNDSTGIIYLDFSKKFLIAGRILDTGSKKDVTATAL
CCCCHHHHHCCCHHHHHHHHHHHEECCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHH
NRVRRIDPSKLPLDNALVLGNATGSRNIYVFTDPECPFCAKFHRELVALTKEDPQLGVRI
HHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEE
ILTPLDIHPRASAVTNSILCAAQDGMDKGLRLLEESFNGTAIADITCGRDYAEEGKTLFK
EEEECCCCCCHHHHHHHEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
ELRIRMTPTTVLSDGRVVDGVKTGAEIEKLFDDTEHGVITEKPQ
HHHEEECCCEEECCCEEECCHHCCHHHHHHHCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA