Click here to switch to the map view.

The map label for this gene is 78223447

Identifier: 78223447

GI number: 78223447

Start: 2534896

End: 2535813

Strand: Reverse

Name: 78223447

Synonym: Gmet_2242

Alternate gene names: NA

Gene position: 2535813-2534896 (Counterclockwise)

Preceding gene: 78223448

Following gene: 78223446

Centisome position: 63.44

GC content: 40.52

Gene sequence:

>918_bases
GTGGAGCTTGCATTGAGAGTGACGAATTTAGTTGAAAAGGAGACAATTATGAGAAAAGTAGTCCTCGTTACAGCTCTCAT
TACATTGTTGTCAGCACATTTGTTGTTTGCTGCTGAACAAATAAAGCCTTCGACTGCCAAGCCTGAAGAAAGCTATGATT
CCAAAAACGCTAAGGAAATGCTTGCCCGAGCTGTCGAGCTCTATAACAAAAAAAAGGATCGTTCATTTGCAGACTTCTCC
ATGCAGGGTCAATTCGTCAAGGGTAATCTCTATGTTTATGTGATCGGAACAAATGGGAAATTTCTCGCAAGCGGTGGATC
GTCATCAGTTTTGATTGGTCGGGACGTATCAAACATGCGAGATGCTGAAGGTAAACTATTTTTTCGTGAGATGATAGATA
CGGCAAAGAGTCAAAATGCCGGTGCGGTTGAATACAAATGGCTCAATCGTTTGGATGGGAAGCCTGAACACAAACATACT
TATTTCCAAAGAATAGGGGATCGAATAATTGCTGTTGGGTTCTACATTCCGCATGCAAGTGATGTACAGGCCTATGCTCT
CCTTGCGCAGGCTGTTGAAACGCTGAAGAAAGACCCTGTCTCTGCGTGTAATGCTTTTAATGATCTTAATAGCAAGTTTA
TACAGGATGATCTTTACGTATTTGTTGTAGATTTGAAAGATAATATTTTCCGCGCTCATGGTGCTACACCGCGACTCGTC
AACACAGATGCAATGGAGTTGAGAAACCCTGATGGTAAATCAATTGTCAAGGAGATGATTGGCATTGCCAAAAAAAAGGG
AAAAGGAACATTGACATATCGTTGGAGGAATTTATTAACGGGGAAAATAGAAGTTAAGAACACTATATTTCGTAAAGTAG
ACAATTACCTTATTGCAGTAGGCTATTATACGCAATAA

Upstream 100 bases:

>100_bases
TACTATCTTAGGAGACATGCTGTTTTGGCAACAGTAGAAACATCTCACAAGAGCGGTTTGACTGTAGGATAATGGATAGT
CGATAGGGCCAAATACAAAT

Downstream 100 bases:

>100_bases
TGGATCCCCCCCAGCTAGGGGGGGCTTCTTGGTTTACTGATGCTTACGAAAAATATTATAACCTGCCGGGTTGTCCAAGA
CTCCCTTCTATCACGGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cache Sensor Protein; Methyl-Accepting Chemotaxis Protein; Cache Domain-Contain Protein; Cache Domain Family

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MELALRVTNLVEKETIMRKVVLVTALITLLSAHLLFAAEQIKPSTAKPEESYDSKNAKEMLARAVELYNKKKDRSFADFS
MQGQFVKGNLYVYVIGTNGKFLASGGSSSVLIGRDVSNMRDAEGKLFFREMIDTAKSQNAGAVEYKWLNRLDGKPEHKHT
YFQRIGDRIIAVGFYIPHASDVQAYALLAQAVETLKKDPVSACNAFNDLNSKFIQDDLYVFVVDLKDNIFRAHGATPRLV
NTDAMELRNPDGKSIVKEMIGIAKKKGKGTLTYRWRNLLTGKIEVKNTIFRKVDNYLIAVGYYTQ

Sequences:

>Translated_305_residues
MELALRVTNLVEKETIMRKVVLVTALITLLSAHLLFAAEQIKPSTAKPEESYDSKNAKEMLARAVELYNKKKDRSFADFS
MQGQFVKGNLYVYVIGTNGKFLASGGSSSVLIGRDVSNMRDAEGKLFFREMIDTAKSQNAGAVEYKWLNRLDGKPEHKHT
YFQRIGDRIIAVGFYIPHASDVQAYALLAQAVETLKKDPVSACNAFNDLNSKFIQDDLYVFVVDLKDNIFRAHGATPRLV
NTDAMELRNPDGKSIVKEMIGIAKKKGKGTLTYRWRNLLTGKIEVKNTIFRKVDNYLIAVGYYTQ
>Mature_305_residues
MELALRVTNLVEKETIMRKVVLVTALITLLSAHLLFAAEQIKPSTAKPEESYDSKNAKEMLARAVELYNKKKDRSFADFS
MQGQFVKGNLYVYVIGTNGKFLASGGSSSVLIGRDVSNMRDAEGKLFFREMIDTAKSQNAGAVEYKWLNRLDGKPEHKHT
YFQRIGDRIIAVGFYIPHASDVQAYALLAQAVETLKKDPVSACNAFNDLNSKFIQDDLYVFVVDLKDNIFRAHGATPRLV
NTDAMELRNPDGKSIVKEMIGIAKKKGKGTLTYRWRNLLTGKIEVKNTIFRKVDNYLIAVGYYTQ

Specific function: Unknown

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34320; Mature: 34320

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELALRVTNLVEKETIMRKVVLVTALITLLSAHLLFAAEQIKPSTAKPEESYDSKNAKEM
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHH
LARAVELYNKKKDRSFADFSMQGQFVKGNLYVYVIGTNGKFLASGGSSSVLIGRDVSNMR
HHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECCCEEEECCCCCEEEEECCHHHHH
DAEGKLFFREMIDTAKSQNAGAVEYKWLNRLDGKPEHKHTYFQRIGDRIIAVGFYIPHAS
CCCCHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCC
DVQAYALLAQAVETLKKDPVSACNAFNDLNSKFIQDDLYVFVVDLKDNIFRAHGATPRLV
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCEE
NTDAMELRNPDGKSIVKEMIGIAKKKGKGTLTYRWRNLLTGKIEVKNTIFRKVDNYLIAV
CCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCEEEHHHHHHHHHCCEEEEE
GYYTQ
EEECC
>Mature Secondary Structure
MELALRVTNLVEKETIMRKVVLVTALITLLSAHLLFAAEQIKPSTAKPEESYDSKNAKEM
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHH
LARAVELYNKKKDRSFADFSMQGQFVKGNLYVYVIGTNGKFLASGGSSSVLIGRDVSNMR
HHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECCCEEEECCCCCEEEEECCHHHHH
DAEGKLFFREMIDTAKSQNAGAVEYKWLNRLDGKPEHKHTYFQRIGDRIIAVGFYIPHAS
CCCCHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCC
DVQAYALLAQAVETLKKDPVSACNAFNDLNSKFIQDDLYVFVVDLKDNIFRAHGATPRLV
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCEE
NTDAMELRNPDGKSIVKEMIGIAKKKGKGTLTYRWRNLLTGKIEVKNTIFRKVDNYLIAV
CCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCEEEHHHHHHHHHCCEEEEE
GYYTQ
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA