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The map label for this gene is 78223421

Identifier: 78223421

GI number: 78223421

Start: 2507844

End: 2508413

Strand: Reverse

Name: 78223421

Synonym: Gmet_2216

Alternate gene names: NA

Gene position: 2508413-2507844 (Counterclockwise)

Preceding gene: 78223422

Following gene: 78223420

Centisome position: 62.75

GC content: 43.68

Gene sequence:

>570_bases
ATGGAAAATACCTACGACAAACTGATTACGGCTGCGATCGAATTGATGAATATTGAGGGGTATCCCGGTGCATCCATCGG
CATGCTTGCCTCCAAAGTCGGTATTTCCAAAAGTACGGTGATCCATTATTTCAAAAGCAAAGAAGGGATTCTTCTTGCCA
TACTGGAAAATTTCCTCCCCGGATATATTGATGCTTTCAAACCGGTACTTAAAGATCCCGATATGGATGGGGTTGAAAAA
CTGCACAAATTCCTTCACTTCCATATGAAACTGGTGGTTGAAAGGAGGGATGTGTTAACGATCAATCTAAGGGATACCAA
ATACCTGACAGGTAAAAACAAAGTTATTTACCAGAATCAACAACGGCTCTATGAAGAGCAGGTAGTGAAGATTATCGAAC
AAATCCAGAAGGAGGGGCATGGTTTGTTCAGAGGGTTAAAGCCTTCCATTACCGCGAAGGCGATCCTGGGCATGTGTAAC
TATGCCACCATCTGGTACAAGGAGGACGACCGGTTAAGCATAGAAGACCTTGCAGAGCACTTCTTTGCCATTTTGACCAG
AGGTAAGTAG

Upstream 100 bases:

>100_bases
TTCGGTCTGTTTTCTTGTAGCTGAAAGTTACAGCAGATTGCCTGGGGACAACAGTGCCAGAATACTGCAATGACAATCCG
TCGAATGAAAGGGCTAGCCT

Downstream 100 bases:

>100_bases
CGGGCGGACCGGACTCCAATCCGGTCCCGCTGTCTTTTCACTCGTTTCACCGTTCTTCAAATCCTTAAGAGTCCTTCCCC
TCACGTTACCTAACACCTTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MENTYDKLITAAIELMNIEGYPGASIGMLASKVGISKSTVIHYFKSKEGILLAILENFLPGYIDAFKPVLKDPDMDGVEK
LHKFLHFHMKLVVERRDVLTINLRDTKYLTGKNKVIYQNQQRLYEEQVVKIIEQIQKEGHGLFRGLKPSITAKAILGMCN
YATIWYKEDDRLSIEDLAEHFFAILTRGK

Sequences:

>Translated_189_residues
MENTYDKLITAAIELMNIEGYPGASIGMLASKVGISKSTVIHYFKSKEGILLAILENFLPGYIDAFKPVLKDPDMDGVEK
LHKFLHFHMKLVVERRDVLTINLRDTKYLTGKNKVIYQNQQRLYEEQVVKIIEQIQKEGHGLFRGLKPSITAKAILGMCN
YATIWYKEDDRLSIEDLAEHFFAILTRGK
>Mature_189_residues
MENTYDKLITAAIELMNIEGYPGASIGMLASKVGISKSTVIHYFKSKEGILLAILENFLPGYIDAFKPVLKDPDMDGVEK
LHKFLHFHMKLVVERRDVLTINLRDTKYLTGKNKVIYQNQQRLYEEQVVKIIEQIQKEGHGLFRGLKPSITAKAILGMCN
YATIWYKEDDRLSIEDLAEHFFAILTRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21665; Mature: 21665

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTYDKLITAAIELMNIEGYPGASIGMLASKVGISKSTVIHYFKSKEGILLAILENFLP
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCHHHHHHHHCC
GYIDAFKPVLKDPDMDGVEKLHKFLHFHMKLVVERRDVLTINLRDTKYLTGKNKVIYQNQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCEEECHH
QRLYEEQVVKIIEQIQKEGHGLFRGLKPSITAKAILGMCNYATIWYKEDDRLSIEDLAEH
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH
FFAILTRGK
HHHHHHCCC
>Mature Secondary Structure
MENTYDKLITAAIELMNIEGYPGASIGMLASKVGISKSTVIHYFKSKEGILLAILENFLP
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHEECCCCCCHHHHHHHHCC
GYIDAFKPVLKDPDMDGVEKLHKFLHFHMKLVVERRDVLTINLRDTKYLTGKNKVIYQNQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCEEECHH
QRLYEEQVVKIIEQIQKEGHGLFRGLKPSITAKAILGMCNYATIWYKEDDRLSIEDLAEH
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH
FFAILTRGK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA