Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 78223404

GI number: 78223404

Start: 2486785

End: 2487951

Strand: Reverse

Name: yngJ [H]

Synonym: Gmet_2199

Alternate gene names: 78223404

Gene position: 2487951-2486785 (Counterclockwise)

Preceding gene: 78223405

Following gene: 78223403

Centisome position: 62.24

GC content: 52.44

Gene sequence:

>1167_bases
ATGGAAATAGAATTGAACAGCAGGGAGAGTGCAATTTTGGAGGAGGTGCGCCGTTTTCTCAAGAGCGAAGTCACTCCTGA
ACTGCTCGCCGAGTCGCACCATCTTGAGTATATCTATGGTGGCGAAGAAGGCCGGAAATTCGTCCGGAAATTTGCCGCCA
ATGGTTGGTTGACCCCCTGCTGGCCGGAAGAATACGGTGGGCTCAACTCGTCTGAAATGCTCATGTATGCCATCCGGAAT
GAAATGGCATATGCACGGGTGCCGATACATTTTGCTGGTGCGCACATGGCCGGGCCGAGCATCCTCAGATACGGGAACGA
CGACCTGAAAAAAAATTATCTTCTCCGACTCGCGAGTGGTGAAATCGAGTTTGCCCTCGGCTATTCCGAGCCTGCAGCAG
GTTCGGACCTCATGGGCCTTGAGATGCGAGCGGCGGACAAGGGTGATCACCTGATTGTTAACGGGCAGAAGACATTCAAC
ACCCATGCCCATGTTGCCGATTATCATTGGCTGGCGGTAAGGACCAATCTTGAAGGGCCCAAACACAAAGGGATATCGAT
TCTCATTGTGGATCTCAAAAGTCCGGGGATAACCATACGCCCCATGATCACCATGGCTGGAACCAGGACCAACGAGGTCT
TTTACGACGACGTGGTTGTCCCCCGTGCGAACCTTGTTGGTGAAATCAACAGCGGTTTCAAGTACATCATGGCGGCGCTC
GATTTTGAACGGATGTTTCCGTTCGGTCACTACAAAAAGTTTTATGAGGATCTGGTGGCCTATCTCAAAACGGTTACGCG
CAACGGCATGCCGCTCACCAAGGACCCACTGGTTCGGCAGAAACTTGCCCAGTTGGAGATTGAACTGGAGATAATCCATC
ACCTTTACTTCCAGCTTGCCCACATGCTGGACAACGGCAAGATACCCAATTACCAGGCATCCATGGAGAAGAACTTCCTG
ACCGATTTCGAACAGCGGCTGGCCAATACAGCGCTTGAGATACTGGGGGCAAGAGGCCAACTGAGGGAGGGTGCAAATGG
AGCTATTCTGGACGGTTTGCCTGAATGGCTCTACCGCTGGACTGTTATTGAGACCATTTACGGGGGGACCGCCGAAATCC
AGCGGAATATCATGGCACAACGCGGTTTAGGGTTGCCGAGAGCATAG

Upstream 100 bases:

>100_bases
CTTGACGGGACAAATGACATGTACTATATAGATAGTAATCGAACGTTCGGTATAGAGCTGATGTATTTACCGTCCTGGTA
ATTCATTCAGGAGGAAACCA

Downstream 100 bases:

>100_bases
GGGGGCGAGGAATGAACTACAGTTTGAATGATGAACAGAAGATACTTAAAGATACCGCTCGGTCCTTTTTTACGGAGGAG
TTGAAGAGTTCGCTTGTTCG

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MEIELNSRESAILEEVRRFLKSEVTPELLAESHHLEYIYGGEEGRKFVRKFAANGWLTPCWPEEYGGLNSSEMLMYAIRN
EMAYARVPIHFAGAHMAGPSILRYGNDDLKKNYLLRLASGEIEFALGYSEPAAGSDLMGLEMRAADKGDHLIVNGQKTFN
THAHVADYHWLAVRTNLEGPKHKGISILIVDLKSPGITIRPMITMAGTRTNEVFYDDVVVPRANLVGEINSGFKYIMAAL
DFERMFPFGHYKKFYEDLVAYLKTVTRNGMPLTKDPLVRQKLAQLEIELEIIHHLYFQLAHMLDNGKIPNYQASMEKNFL
TDFEQRLANTALEILGARGQLREGANGAILDGLPEWLYRWTVIETIYGGTAEIQRNIMAQRGLGLPRA

Sequences:

>Translated_388_residues
MEIELNSRESAILEEVRRFLKSEVTPELLAESHHLEYIYGGEEGRKFVRKFAANGWLTPCWPEEYGGLNSSEMLMYAIRN
EMAYARVPIHFAGAHMAGPSILRYGNDDLKKNYLLRLASGEIEFALGYSEPAAGSDLMGLEMRAADKGDHLIVNGQKTFN
THAHVADYHWLAVRTNLEGPKHKGISILIVDLKSPGITIRPMITMAGTRTNEVFYDDVVVPRANLVGEINSGFKYIMAAL
DFERMFPFGHYKKFYEDLVAYLKTVTRNGMPLTKDPLVRQKLAQLEIELEIIHHLYFQLAHMLDNGKIPNYQASMEKNFL
TDFEQRLANTALEILGARGQLREGANGAILDGLPEWLYRWTVIETIYGGTAEIQRNIMAQRGLGLPRA
>Mature_388_residues
MEIELNSRESAILEEVRRFLKSEVTPELLAESHHLEYIYGGEEGRKFVRKFAANGWLTPCWPEEYGGLNSSEMLMYAIRN
EMAYARVPIHFAGAHMAGPSILRYGNDDLKKNYLLRLASGEIEFALGYSEPAAGSDLMGLEMRAADKGDHLIVNGQKTFN
THAHVADYHWLAVRTNLEGPKHKGISILIVDLKSPGITIRPMITMAGTRTNEVFYDDVVVPRANLVGEINSGFKYIMAAL
DFERMFPFGHYKKFYEDLVAYLKTVTRNGMPLTKDPLVRQKLAQLEIELEIIHHLYFQLAHMLDNGKIPNYQASMEKNFL
TDFEQRLANTALEILGARGQLREGANGAILDGLPEWLYRWTVIETIYGGTAEIQRNIMAQRGLGLPRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=390, Percent_Identity=29.2307692307692, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI4557231, Length=390, Percent_Identity=29.2307692307692, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI4557233, Length=391, Percent_Identity=28.3887468030691, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI226958412, Length=387, Percent_Identity=24.8062015503876, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI226958414, Length=350, Percent_Identity=26, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=25.9259259259259, Blast_Score=118, Evalue=8e-27,
Organism=Homo sapiens, GI21361497, Length=340, Percent_Identity=30, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4501859, Length=390, Percent_Identity=24.8717948717949, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI76496475, Length=307, Percent_Identity=26.0586319218241, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4557235, Length=297, Percent_Identity=25.9259259259259, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI7656849, Length=280, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI48976061, Length=254, Percent_Identity=25.9842519685039, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI211971008, Length=254, Percent_Identity=25.9842519685039, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=25, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1786223, Length=347, Percent_Identity=23.6311239193084, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570075, Length=395, Percent_Identity=28.8607594936709, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=28.0612244897959, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17569725, Length=396, Percent_Identity=27.5252525252525, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17538396, Length=386, Percent_Identity=26.4248704663212, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17508101, Length=394, Percent_Identity=27.9187817258883, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=339, Percent_Identity=28.3185840707965, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=293, Percent_Identity=26.2798634812287, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=293, Percent_Identity=25.938566552901, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=320, Percent_Identity=27.5, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=249, Percent_Identity=27.3092369477912, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=248, Percent_Identity=27.4193548387097, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=342, Percent_Identity=24.2690058479532, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=287, Percent_Identity=27.5261324041812, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=296, Percent_Identity=24.6621621621622, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=255, Percent_Identity=25.8823529411765, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356377, Length=346, Percent_Identity=30.635838150289, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=29.2105263157895, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI21355753, Length=388, Percent_Identity=26.2886597938144, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24646207, Length=375, Percent_Identity=28.5333333333333, Blast_Score=114, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24666513, Length=389, Percent_Identity=23.9074550128535, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281363737, Length=343, Percent_Identity=26.2390670553936, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI19920834, Length=356, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43910; Mature: 43910

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIELNSRESAILEEVRRFLKSEVTPELLAESHHLEYIYGGEEGRKFVRKFAANGWLTPC
CEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
WPEEYGGLNSSEMLMYAIRNEMAYARVPIHFAGAHMAGPSILRYGNDDLKKNYLLRLASG
CCHHHCCCCHHHHHHHHHHHCCEEEECCEEECCCCCCCCHHEECCCHHHHHCEEEEEECC
EIEFALGYSEPAAGSDLMGLEMRAADKGDHLIVNGQKTFNTHAHVADYHWLAVRTNLEGP
CEEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECEEEEEEEECCCCC
KHKGISILIVDLKSPGITIRPMITMAGTRTNEVFYDDVVVPRANLVGEINSGFKYIMAAL
CCCCEEEEEEEECCCCEEEEEEEEECCCCCCCEEECCEECCCHHHHHCCCCCHHHHHHHH
DFERMFPFGHYKKFYEDLVAYLKTVTRNGMPLTKDPLVRQKLAQLEIELEIIHHLYFQLA
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HMLDNGKIPNYQASMEKNFLTDFEQRLANTALEILGARGQLREGANGAILDGLPEWLYRW
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
TVIETIYGGTAEIQRNIMAQRGLGLPRA
HHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEIELNSRESAILEEVRRFLKSEVTPELLAESHHLEYIYGGEEGRKFVRKFAANGWLTPC
CEEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
WPEEYGGLNSSEMLMYAIRNEMAYARVPIHFAGAHMAGPSILRYGNDDLKKNYLLRLASG
CCHHHCCCCHHHHHHHHHHHCCEEEECCEEECCCCCCCCHHEECCCHHHHHCEEEEEECC
EIEFALGYSEPAAGSDLMGLEMRAADKGDHLIVNGQKTFNTHAHVADYHWLAVRTNLEGP
CEEEEECCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECEEEEEEEECCCCC
KHKGISILIVDLKSPGITIRPMITMAGTRTNEVFYDDVVVPRANLVGEINSGFKYIMAAL
CCCCEEEEEEEECCCCEEEEEEEEECCCCCCCEEECCEECCCHHHHHCCCCCHHHHHHHH
DFERMFPFGHYKKFYEDLVAYLKTVTRNGMPLTKDPLVRQKLAQLEIELEIIHHLYFQLA
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HMLDNGKIPNYQASMEKNFLTDFEQRLANTALEILGARGQLREGANGAILDGLPEWLYRW
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
TVIETIYGGTAEIQRNIMAQRGLGLPRA
HHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]