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The map label for this gene is bphB [H]

Identifier: 78223392

GI number: 78223392

Start: 2473805

End: 2474950

Strand: Reverse

Name: bphB [H]

Synonym: Gmet_2186

Alternate gene names: 78223392

Gene position: 2474950-2473805 (Counterclockwise)

Preceding gene: 78223394

Following gene: 78223391

Centisome position: 61.91

GC content: 53.93

Gene sequence:

>1146_bases
GTGACGGCATCTGATGCTGAAGAGCGGGGGATAGCGCTTCTCTATGTTGAAGATGAACCGGGCACCCGTGAGATGTTCAG
CCTGATCATCTCACGTCGTTATCCGGAGTTGCGGATTATTGTCGCTGAAGACGGCCAATCGGGATTTGTCGCATTCAGGC
AGAATCTACCCCAGATCGTTATCACCGACATCAACATGCCCGTAACCGACGGCCTCAAGATGGCGGCGGAGATCAAGGCG
TTGAGTCCCCAGACCGAGATCATCGCCCTGACTGCCTATGCCAACACGCAGCAGTTGCTGCAAGCCATCGAGATCGGCAT
CAGTCACTACATCCTGAAGCCCATCGATATTCAGCAGATTTTCGCCGTCCTGGACAAGGTGCTGTCTATTATCAGGGCGC
AACAGGAGATTTCACGGCAGAACGAACTGATTCGAAGCCTCAATGCTGACCTGGCCCGCAAGGCGGCGGACCTGGAGATG
GCGAACAGTGAGCTTGAAGCATTCAACTACACGGTTGCCCACGATCTCCGTTCCCCCATGGTATCCATCAGCGGTTTCTC
CCAGGTGCTGCTCGAAATGCACGCCGCGGTCCTGAACGACGAGGGGAAGAAATATCTCGGGATCATACACCGGGAAGTTC
TCCGCATGAGCAACCTCATCGGAGTCCTGCTCAAATTCTCCCTCTACTCGCGAAAGCGTGTGGAAAAAAGCTGGTCGGAT
CTCAGCGGCATGGCTAATGAGATCAAAACTAACCTGCTCCTGCAGCAACCGGACTGCCGGGCGGTTTTTTCAATCGCCGA
AGGGGTCAAAGGCTTTTGCGACCCCGAACTTCTGCGGATAGTCCTTGAAAATCTTTTCGAAAATGCCTTGAAGTACTCCA
TGAAAAAAGAAGATGCCCATATCGAGTTCGGCATGGTCAACCAGGAGGACGATCTCATCTATTTTGTCCGTGACAATGGG
ATCGGATTCGATCAACAGGATGCCGACAAGCTTTTCCTCCCCTTCCAGAGACTCGAATGTGACCGCGAGATTGCCGGATT
CGGCATCGGTCTCGCCACGGCGTCACGGATAATCCAGCGCCATGGCGGCAAGATCTGGGCCGAGGGGGAGAAAGGGATTG
GAGCGACATTCTATTTCAGCCTTTGA

Upstream 100 bases:

>100_bases
CTCGATGGTTGAGGAAGGTGAGGCGGGCGGGTATACTATTTCAGATTATTGGCTGATCCCAACACTCACGACGGCGCAAT
GTTCAGGATAGGGGTGAAAT

Downstream 100 bases:

>100_bases
TCCCTGCTCTCTTGTTTGGTCGCGCAGGGGGGGCCCGATTCCCTTGCCCCCTGCACGGTTATCCGTCCCCGTAGGACTAC
GCCGCACTGTGCTTCTCTGA

Product: response regulator receiver sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTASDAEERGIALLYVEDEPGTREMFSLIISRRYPELRIIVAEDGQSGFVAFRQNLPQIVITDINMPVTDGLKMAAEIKA
LSPQTEIIALTAYANTQQLLQAIEIGISHYILKPIDIQQIFAVLDKVLSIIRAQQEISRQNELIRSLNADLARKAADLEM
ANSELEAFNYTVAHDLRSPMVSISGFSQVLLEMHAAVLNDEGKKYLGIIHREVLRMSNLIGVLLKFSLYSRKRVEKSWSD
LSGMANEIKTNLLLQQPDCRAVFSIAEGVKGFCDPELLRIVLENLFENALKYSMKKEDAHIEFGMVNQEDDLIYFVRDNG
IGFDQQDADKLFLPFQRLECDREIAGFGIGLATASRIIQRHGGKIWAEGEKGIGATFYFSL

Sequences:

>Translated_381_residues
MTASDAEERGIALLYVEDEPGTREMFSLIISRRYPELRIIVAEDGQSGFVAFRQNLPQIVITDINMPVTDGLKMAAEIKA
LSPQTEIIALTAYANTQQLLQAIEIGISHYILKPIDIQQIFAVLDKVLSIIRAQQEISRQNELIRSLNADLARKAADLEM
ANSELEAFNYTVAHDLRSPMVSISGFSQVLLEMHAAVLNDEGKKYLGIIHREVLRMSNLIGVLLKFSLYSRKRVEKSWSD
LSGMANEIKTNLLLQQPDCRAVFSIAEGVKGFCDPELLRIVLENLFENALKYSMKKEDAHIEFGMVNQEDDLIYFVRDNG
IGFDQQDADKLFLPFQRLECDREIAGFGIGLATASRIIQRHGGKIWAEGEKGIGATFYFSL
>Mature_380_residues
TASDAEERGIALLYVEDEPGTREMFSLIISRRYPELRIIVAEDGQSGFVAFRQNLPQIVITDINMPVTDGLKMAAEIKAL
SPQTEIIALTAYANTQQLLQAIEIGISHYILKPIDIQQIFAVLDKVLSIIRAQQEISRQNELIRSLNADLARKAADLEMA
NSELEAFNYTVAHDLRSPMVSISGFSQVLLEMHAAVLNDEGKKYLGIIHREVLRMSNLIGVLLKFSLYSRKRVEKSWSDL
SGMANEIKTNLLLQQPDCRAVFSIAEGVKGFCDPELLRIVLENLFENALKYSMKKEDAHIEFGMVNQEDDLIYFVRDNGI
GFDQQDADKLFLPFQRLECDREIAGFGIGLATASRIIQRHGGKIWAEGEKGIGATFYFSL

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=27.5, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=29.7071129707113, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790346, Length=213, Percent_Identity=29.1079812206573, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789149, Length=251, Percent_Identity=26.6932270916335, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788550, Length=125, Percent_Identity=28.8, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790551, Length=242, Percent_Identity=28.5123966942149, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788713, Length=267, Percent_Identity=24.3445692883895, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787894, Length=214, Percent_Identity=27.1028037383178, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=27.6150627615063, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42808; Mature: 42677

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASDAEERGIALLYVEDEPGTREMFSLIISRRYPELRIIVAEDGQSGFVAFRQNLPQIV
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEEE
ITDINMPVTDGLKMAAEIKALSPQTEIIALTAYANTQQLLQAIEIGISHYILKPIDIQQI
EEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHH
FAVLDKVLSIIRAQQEISRQNELIRSLNADLARKAADLEMANSELEAFNYTVAHDLRSPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
VSISGFSQVLLEMHAAVLNDEGKKYLGIIHREVLRMSNLIGVLLKFSLYSRKRVEKSWSD
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGMANEIKTNLLLQQPDCRAVFSIAEGVKGFCDPELLRIVLENLFENALKYSMKKEDAH
HHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
IEFGMVNQEDDLIYFVRDNGIGFDQQDADKLFLPFQRLECDREIAGFGIGLATASRIIQR
EEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCHHHHCCCHHHHHCCHHHHHHHHHHHH
HGGKIWAEGEKGIGATFYFSL
CCCEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
TASDAEERGIALLYVEDEPGTREMFSLIISRRYPELRIIVAEDGQSGFVAFRQNLPQIV
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEEE
ITDINMPVTDGLKMAAEIKALSPQTEIIALTAYANTQQLLQAIEIGISHYILKPIDIQQI
EEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHH
FAVLDKVLSIIRAQQEISRQNELIRSLNADLARKAADLEMANSELEAFNYTVAHDLRSPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
VSISGFSQVLLEMHAAVLNDEGKKYLGIIHREVLRMSNLIGVLLKFSLYSRKRVEKSWSD
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGMANEIKTNLLLQQPDCRAVFSIAEGVKGFCDPELLRIVLENLFENALKYSMKKEDAH
HHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
IEFGMVNQEDDLIYFVRDNGIGFDQQDADKLFLPFQRLECDREIAGFGIGLATASRIIQR
EEEEEECCCCCEEEEEECCCCCCCCCCCCHHCCCHHHHCCCHHHHHCCHHHHHHHHHHHH
HGGKIWAEGEKGIGATFYFSL
CCCEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]