| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223391
Identifier: 78223391
GI number: 78223391
Start: 2471456
End: 2473426
Strand: Reverse
Name: 78223391
Synonym: Gmet_2185
Alternate gene names: NA
Gene position: 2473426-2471456 (Counterclockwise)
Preceding gene: 78223392
Following gene: 78223390
Centisome position: 61.88
GC content: 63.27
Gene sequence:
>1971_bases ATGAGAAGACGATTGTTGTACCAGGTGTTTGTCGCCGCATTCATGATGGTGTGGGTGATGGTCATGGCAGGTTGCGGAGG AGGGGGCGGCGGTTCGGCGCCGGTCGCCAGCCAGGGGGTAAGCAAAGGGACCATTACCAAGCTGGGGAGCATTTTTGTCA ACGGGGTGGAATACGACACCACTGGCCTCACCCCCGACATGGAAAATCCCGGTGACGTGGCCGGAGGGCTCAAGGTAGGG ATGGTCGTCACGGTTATGGGGACATTCAGCGACAGTACCCACGCCAAGGCGACCTATGTCAAGTTTTCCGATACCCTCGA GGGGCCGATCGCGGCAGTGGACAGCGTTGCGAAAACCATGACGGTTCTGGGGCAGAACATCACGTTCGATTCGGCAACGG TGTTCGACGATTTCAACAGCGCCCCCATGCCGGGACAAATGGTCCAGGTAAGCGGCTACGCGGATGCCAGCGGCACGATC AAGGCAACCCGCATCGAGCGGCATCTCCCCGACTGGACACCGACCACGGTTGTTGAGATGAAAGGGACCATCACCGCCAT GCCGACGGCCACCAGCTTCGCCATCGGCGGCCTGACCGTTGACGCAACCGGCATCACCCTCCCGGCCGGCACCGCCGTTG GGTCGTTCGTCAAGGTCGAGGGGACCATGACGGCTGCCACCGCCACTACCCTCAAGGCGACCAGCGTTTCCTCCCGCAAA GAGGGGGTCGAGGTCGACGATAACCACAAAGGGCACGTGGATGTCGAGGGCTTTGTCCAGAATCTTACCGGCAATACGTT CACGGTGGCAGGCACGAAGGTTAACGCGGGCAATCTTTCCCTTGCCGGGATCGCCAACGGCGTCAAGGTGGAAGTGGAAG GCACCGTTGTCAACGGCGTACTGAATGCCACGAAGATCTCGATTGAAGGGGCAGCGCCTCCGGCGGCCGTTCCGTCAGCT CCCACGGCAACCGCCGCCGCCGGTTCCGGGCAGGTAACCATCTCCTGGGGCGCCGTGTCCAGTGCCACGTCGTACAATAT CTACTGGGCCACGACCACGGGCGTTACCCCGGCAACGGGGACCAAGATCGCCAATGTCAATTCTCCCTACACCCAGACCG GTCTCACCAACGGCACCACCTACTTCTACGTCGTGACCGCGGTTAACGCCGTTGGCGAGAGCGCCCCGTCGGGCCAGGTT TCGGCCACTCCTTCCGCCGTCGCGACCGTGCCGGCTGCTCCCGTTGCAAGTGCCGCCGCTGGTGCCAATCAGGTGACCAT CACCTGGCCTGCCGTCACCGGTGCCACCTCGTACAACCTGTACTGGTCCACGACCACGGGCGTTACCCCGGCTAACGGGA CCCTGATCGCCGGCGTTACCTCTCCCTACGTCCAGACCGCCCTGACCAACGGCACCACCTACTTCTACGTCGTGACTGCG GTCAATGCCGTCGGCGAAAGCGCCCCGTCGGCCCAGGTTTCGGCCACTCCCGCCGCCGCGGTGACCGTGCCGGCCGCTCC CGTTGCGACTGCCACGGGCGGCGCCAATCAGGTAACCATCACCTGGCCGGCCGTTACCGGCGCAACCTCGTACAACCTGT ACTGGTCCACCACCACGGGCGTTACCCCGGCCAACGGGACCCTGATCGCCAACGCCACCTCTCCCTATGTTCAGACCGGT CTGACCGCATCCACCACCTATTTCTACGTGGTCACCGCCATGAACGCTGCCGGCACCAGCGCCCCGTCGGCCCAGGTTTC GGCCATGACATCGGCTCCGGCCCTGGACGGCGCGGCACTGTATGCAGCCAACTGTGCCGGCTGCCACAACCCGTTGGCGA CGTCGACCAAGAGGATGAGAACCGCAGCCCAGATTCAGGCTGCAATCAATAACAACGTTGGCGGCATGGGCTTCCTGTCG ACCCTGACTGCTGCCCAGGTTCAAGCCATTGCCACAGCCCTGAACTTCTGA
Upstream 100 bases:
>100_bases CCGGGGGCTGCTGGTACTATTGCCCTGGGTTGCCGCAGAGCCAATCTGCGCATACGAAACAGTCGGCAAAGTCACACAGC AAAGGGTCAAGGAGGACACG
Downstream 100 bases:
>100_bases TTCCGGAACGTAATGCACCTGCCGGGGGGGTCCGCACGGACCCCCCGGCAGGTAACACCCTTACCAAGGAAAAACAGAAT TTCCGACAGGGCTGTGGGGA
Product: fibronectin, type III
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Cellulose 1 4-Beta-Cellobiosidase-Like Protein; Cellulosome Anchoring Protein Cohesin Region; Cellulase; Glycoside Hydrolase Family; Beta-1 3-Glucanase
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MRRRLLYQVFVAAFMMVWVMVMAGCGGGGGGSAPVASQGVSKGTITKLGSIFVNGVEYDTTGLTPDMENPGDVAGGLKVG MVVTVMGTFSDSTHAKATYVKFSDTLEGPIAAVDSVAKTMTVLGQNITFDSATVFDDFNSAPMPGQMVQVSGYADASGTI KATRIERHLPDWTPTTVVEMKGTITAMPTATSFAIGGLTVDATGITLPAGTAVGSFVKVEGTMTAATATTLKATSVSSRK EGVEVDDNHKGHVDVEGFVQNLTGNTFTVAGTKVNAGNLSLAGIANGVKVEVEGTVVNGVLNATKISIEGAAPPAAVPSA PTATAAAGSGQVTISWGAVSSATSYNIYWATTTGVTPATGTKIANVNSPYTQTGLTNGTTYFYVVTAVNAVGESAPSGQV SATPSAVATVPAAPVASAAAGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIAGVTSPYVQTALTNGTTYFYVVTA VNAVGESAPSAQVSATPAAAVTVPAAPVATATGGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIANATSPYVQTG LTASTTYFYVVTAMNAAGTSAPSAQVSAMTSAPALDGAALYAANCAGCHNPLATSTKRMRTAAQIQAAINNNVGGMGFLS TLTAAQVQAIATALNF
Sequences:
>Translated_656_residues MRRRLLYQVFVAAFMMVWVMVMAGCGGGGGGSAPVASQGVSKGTITKLGSIFVNGVEYDTTGLTPDMENPGDVAGGLKVG MVVTVMGTFSDSTHAKATYVKFSDTLEGPIAAVDSVAKTMTVLGQNITFDSATVFDDFNSAPMPGQMVQVSGYADASGTI KATRIERHLPDWTPTTVVEMKGTITAMPTATSFAIGGLTVDATGITLPAGTAVGSFVKVEGTMTAATATTLKATSVSSRK EGVEVDDNHKGHVDVEGFVQNLTGNTFTVAGTKVNAGNLSLAGIANGVKVEVEGTVVNGVLNATKISIEGAAPPAAVPSA PTATAAAGSGQVTISWGAVSSATSYNIYWATTTGVTPATGTKIANVNSPYTQTGLTNGTTYFYVVTAVNAVGESAPSGQV SATPSAVATVPAAPVASAAAGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIAGVTSPYVQTALTNGTTYFYVVTA VNAVGESAPSAQVSATPAAAVTVPAAPVATATGGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIANATSPYVQTG LTASTTYFYVVTAMNAAGTSAPSAQVSAMTSAPALDGAALYAANCAGCHNPLATSTKRMRTAAQIQAAINNNVGGMGFLS TLTAAQVQAIATALNF >Mature_656_residues MRRRLLYQVFVAAFMMVWVMVMAGCGGGGGGSAPVASQGVSKGTITKLGSIFVNGVEYDTTGLTPDMENPGDVAGGLKVG MVVTVMGTFSDSTHAKATYVKFSDTLEGPIAAVDSVAKTMTVLGQNITFDSATVFDDFNSAPMPGQMVQVSGYADASGTI KATRIERHLPDWTPTTVVEMKGTITAMPTATSFAIGGLTVDATGITLPAGTAVGSFVKVEGTMTAATATTLKATSVSSRK EGVEVDDNHKGHVDVEGFVQNLTGNTFTVAGTKVNAGNLSLAGIANGVKVEVEGTVVNGVLNATKISIEGAAPPAAVPSA PTATAAAGSGQVTISWGAVSSATSYNIYWATTTGVTPATGTKIANVNSPYTQTGLTNGTTYFYVVTAVNAVGESAPSGQV SATPSAVATVPAAPVASAAAGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIAGVTSPYVQTALTNGTTYFYVVTA VNAVGESAPSAQVSATPAAAVTVPAAPVATATGGANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIANATSPYVQTG LTASTTYFYVVTAMNAAGTSAPSAQVSAMTSAPALDGAALYAANCAGCHNPLATSTKRMRTAAQIQAAINNNVGGMGFLS TLTAAQVQAIATALNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4502961, Length=284, Percent_Identity=28.169014084507, Blast_Score=81, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65749; Mature: 65749
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3 ; PS01353 HEMATOPO_REC_L_F2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRLLYQVFVAAFMMVWVMVMAGCGGGGGGSAPVASQGVSKGTITKLGSIFVNGVEYDT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHCCCEEEECEEECC TGLTPDMENPGDVAGGLKVGMVVTVMGTFSDSTHAKATYVKFSDTLEGPIAAVDSVAKTM CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TVLGQNITFDSATVFDDFNSAPMPGQMVQVSGYADASGTIKATRIERHLPDWTPTTVVEM HHHCCCCEECCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCCCCCEEEEE KGTITAMPTATSFAIGGLTVDATGITLPAGTAVGSFVKVEGTMTAATATTLKATSVSSRK CCEEEECCCCCEEEECCEEEEECCEEECCCCCCCCEEEEECEEEEEEEEEEEEECCCCHH EGVEVDDNHKGHVDVEGFVQNLTGNTFTVAGTKVNAGNLSLAGIANGVKVEVEGTVVNGV CCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEECE LNATKISIEGAAPPAAVPSAPTATAAAGSGQVTISWGAVSSATSYNIYWATTTGVTPATG EEEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCC TKIANVNSPYTQTGLTNGTTYFYVVTAVNAVGESAPSGQVSATPSAVATVPAAPVASAAA CEEEECCCCCHHCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHC GANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIAGVTSPYVQTALTNGTTYFYVVTA CCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEEEEE VNAVGESAPSAQVSATPAAAVTVPAAPVATATGGANQVTITWPAVTGATSYNLYWSTTTG EHHHCCCCCCCEEECCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCEEEEEEEEECCC VTPANGTLIANATSPYVQTGLTASTTYFYVVTAMNAAGTSAPSAQVSAMTSAPALDGAAL CCCCCCEEEECCCCCHHHCCCEECCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEE YAANCAGCHNPLATSTKRMRTAAQIQAAINNNVGGMGFLSTLTAAQVQAIATALNF EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRRLLYQVFVAAFMMVWVMVMAGCGGGGGGSAPVASQGVSKGTITKLGSIFVNGVEYDT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHCCCEEEECEEECC TGLTPDMENPGDVAGGLKVGMVVTVMGTFSDSTHAKATYVKFSDTLEGPIAAVDSVAKTM CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH TVLGQNITFDSATVFDDFNSAPMPGQMVQVSGYADASGTIKATRIERHLPDWTPTTVVEM HHHCCCCEECCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCCCCCEEEEE KGTITAMPTATSFAIGGLTVDATGITLPAGTAVGSFVKVEGTMTAATATTLKATSVSSRK CCEEEECCCCCEEEECCEEEEECCEEECCCCCCCCEEEEECEEEEEEEEEEEEECCCCHH EGVEVDDNHKGHVDVEGFVQNLTGNTFTVAGTKVNAGNLSLAGIANGVKVEVEGTVVNGV CCCCCCCCCCCEEEHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEECE LNATKISIEGAAPPAAVPSAPTATAAAGSGQVTISWGAVSSATSYNIYWATTTGVTPATG EEEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCC TKIANVNSPYTQTGLTNGTTYFYVVTAVNAVGESAPSGQVSATPSAVATVPAAPVASAAA CEEEECCCCCHHCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHC GANQVTITWPAVTGATSYNLYWSTTTGVTPANGTLIAGVTSPYVQTALTNGTTYFYVVTA CCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEEEEE VNAVGESAPSAQVSATPAAAVTVPAAPVATATGGANQVTITWPAVTGATSYNLYWSTTTG EHHHCCCCCCCEEECCCCEEEEECCCCCEEECCCCCEEEEEECCCCCCEEEEEEEEECCC VTPANGTLIANATSPYVQTGLTASTTYFYVVTAMNAAGTSAPSAQVSAMTSAPALDGAAL CCCCCCEEEECCCCCHHHCCCEECCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEE YAANCAGCHNPLATSTKRMRTAAQIQAAINNNVGGMGFLSTLTAAQVQAIATALNF EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA