| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223314
Identifier: 78223314
GI number: 78223314
Start: 2373162
End: 2374091
Strand: Direct
Name: 78223314
Synonym: Gmet_2107
Alternate gene names: NA
Gene position: 2373162-2374091 (Clockwise)
Preceding gene: 78223313
Following gene: 78223315
Centisome position: 59.37
GC content: 59.78
Gene sequence:
>930_bases ATGAAACAGTTCTCCCTCCGTCGGCTGTTGTTCCTCCCTTGCATCGCCCTTGCCGTATTTCTGTTCTCCGCCCCCCTGAC GTGGGCCGGCGGAGGGCAGCACTATCCGAACGGTGTCGAAGACTTCGCCGTGGGGGCACTCCCCCCTCCGGGTGTCTATC TCGTGAATTACCTGCTGCTCGTCCAGAAAAACAGCATCAAGGACAATTCCGGAAACAGCGTACCGGCGGATTTCAAGGCT GATGTGGTGGCCGAGGTCCCCCGACTCATCTACGTCAGTCCGTTCAAGCTATTGGGAGCCAACTGGGGCGCCCATGTCTT TCTTCCCTTCTACCACGCCGATGTGAAAAGCAGTTCCGACATCCCCCCGCTCAATTTCGATTCCCGCGACACGGGGATGG GGGATCTTATCTTCAGCCCCCTCATCCTTGGCTGGCACTTCACCCCCTCGCTCCATGCCGTCTTTGCACTGGACACCTGG GCACCCACCGGGGACTACGACAAGAACCGGCCGGCAACCCAGATCCTCTCCAGGAACCACTGGACCTTCGAGCCGGTCGT GGCGGTCTCATACCTCAAGGAGGGTTTCGACGTCTCCGCCAAGCTCATGTACGACTTCAACACCAGAAACAGCGACACCG GCACCGACCCAGGCCAGGAGTTCCACATTGACTGGGCAGCGGGCTATGGACTCAGCAACGGGCTGAGCGGGGGCGTGGTG GGCTACAACTACTGGCAGACCACCGACGACAAGGTCAACGGAGTCAGGGTCGAAGACGCAAACAGCAGGGTGGGAGGCAT CGGCTTCGGCATCAAGTACTGGCCCAAACAGGGGCCGTTCAGCATGACCTTCAAACAGTACTGGGAGTATGGCGCCCGCA ACATCGCCACCGGCCCCCAGACCCAGTTCAAGATTTCCTATGCCTTCTGA
Upstream 100 bases:
>100_bases GCGCTACTTCAGCCAGGAAGAAGAGCTGTCCGTGTACGCCGCCTGACCGGTTGCAACGGGCGGCAATCAATTACATCATT TACGAGAAAGAGGATTACTT
Downstream 100 bases:
>100_bases CCCCCCGTGTCAGGAGCGGCTCTGACGCGGCTGATCAATTTCAACGGTTCCGAACAGGGACAAGGTACGCCCATGCGGGA AATGTCGAAAATTTACGAAC
Product: putative signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKQFSLRRLLFLPCIALAVFLFSAPLTWAGGGQHYPNGVEDFAVGALPPPGVYLVNYLLLVQKNSIKDNSGNSVPADFKA DVVAEVPRLIYVSPFKLLGANWGAHVFLPFYHADVKSSSDIPPLNFDSRDTGMGDLIFSPLILGWHFTPSLHAVFALDTW APTGDYDKNRPATQILSRNHWTFEPVVAVSYLKEGFDVSAKLMYDFNTRNSDTGTDPGQEFHIDWAAGYGLSNGLSGGVV GYNYWQTTDDKVNGVRVEDANSRVGGIGFGIKYWPKQGPFSMTFKQYWEYGARNIATGPQTQFKISYAF
Sequences:
>Translated_309_residues MKQFSLRRLLFLPCIALAVFLFSAPLTWAGGGQHYPNGVEDFAVGALPPPGVYLVNYLLLVQKNSIKDNSGNSVPADFKA DVVAEVPRLIYVSPFKLLGANWGAHVFLPFYHADVKSSSDIPPLNFDSRDTGMGDLIFSPLILGWHFTPSLHAVFALDTW APTGDYDKNRPATQILSRNHWTFEPVVAVSYLKEGFDVSAKLMYDFNTRNSDTGTDPGQEFHIDWAAGYGLSNGLSGGVV GYNYWQTTDDKVNGVRVEDANSRVGGIGFGIKYWPKQGPFSMTFKQYWEYGARNIATGPQTQFKISYAF >Mature_309_residues MKQFSLRRLLFLPCIALAVFLFSAPLTWAGGGQHYPNGVEDFAVGALPPPGVYLVNYLLLVQKNSIKDNSGNSVPADFKA DVVAEVPRLIYVSPFKLLGANWGAHVFLPFYHADVKSSSDIPPLNFDSRDTGMGDLIFSPLILGWHFTPSLHAVFALDTW APTGDYDKNRPATQILSRNHWTFEPVVAVSYLKEGFDVSAKLMYDFNTRNSDTGTDPGQEFHIDWAAGYGLSNGLSGGVV GYNYWQTTDDKVNGVRVEDANSRVGGIGFGIKYWPKQGPFSMTFKQYWEYGARNIATGPQTQFKISYAF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34231; Mature: 34231
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFSLRRLLFLPCIALAVFLFSAPLTWAGGGQHYPNGVEDFAVGALPPPGVYLVNYLLL CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHE VQKNSIKDNSGNSVPADFKADVVAEVPRLIYVSPFKLLGANWGAHVFLPFYHADVKSSSD EECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHCCCCCCEEEEEEEECCCCCCCC IPPLNFDSRDTGMGDLIFSPLILGWHFTPSLHAVFALDTWAPTGDYDKNRPATQILSRNH CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCC WTFEPVVAVSYLKEGFDVSAKLMYDFNTRNSDTGTDPGQEFHIDWAAGYGLSNGLSGGVV CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE GYNYWQTTDDKVNGVRVEDANSRVGGIGFGIKYWPKQGPFSMTFKQYWEYGARNIATGPQ EEECEECCCCCCCCEEEECCCCCCCEEECCEEECCCCCCCCHHHHHHHHHCCCCCCCCCC TQFKISYAF CEEEEEEEC >Mature Secondary Structure MKQFSLRRLLFLPCIALAVFLFSAPLTWAGGGQHYPNGVEDFAVGALPPPGVYLVNYLLL CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHE VQKNSIKDNSGNSVPADFKADVVAEVPRLIYVSPFKLLGANWGAHVFLPFYHADVKSSSD EECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHCCCCCCEEEEEEEECCCCCCCC IPPLNFDSRDTGMGDLIFSPLILGWHFTPSLHAVFALDTWAPTGDYDKNRPATQILSRNH CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCC WTFEPVVAVSYLKEGFDVSAKLMYDFNTRNSDTGTDPGQEFHIDWAAGYGLSNGLSGGVV CCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEE GYNYWQTTDDKVNGVRVEDANSRVGGIGFGIKYWPKQGPFSMTFKQYWEYGARNIATGPQ EEECEECCCCCCCCEEEECCCCCCCEEECCEEECCCCCCCCHHHHHHHHHCCCCCCCCCC TQFKISYAF CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA