| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ppsA [H]
Identifier: 78223308
GI number: 78223308
Start: 2366780
End: 2367928
Strand: Direct
Name: ppsA [H]
Synonym: Gmet_2101
Alternate gene names: 78223308
Gene position: 2366780-2367928 (Clockwise)
Preceding gene: 78223307
Following gene: 78223309
Centisome position: 59.21
GC content: 62.84
Gene sequence:
>1149_bases ATGAGCACTGCAGTGAACATGCATGACAAAAGGTGGGGAAACAAGTACGGAACCGTCCGTTCGGCAGGGAAGGTCACGCC GCTGGTCTGCTGGTTCGAGGAGTGCCGGAAGGATTCGGTCCCCCTGGTGGGTGGGAAGTGTTCATCCCTCGGCGAGCTGA TAAGCGCCGGCGTACGGGTCCCTCCCGGCTTTGCGCTCACCACCGAGGGGTATCGCCGCTTCATGACCGACGCCGGGATC GACCGGGAGATTCAATCCATGGTGTCCGGTCTCGACGCCGGTGACATGGAGGCACTGGAGAATACCAGCGGGGCGATCCG GGAAATGATCGAGGCCCACCCCTTCTCCGCCGAGATAGAAGACCTGGTGGCGGAGAGATACCGCAAGCTGGCGGTGCGCT CCTGCCTGCCGGCGGTGCCGGTGGCGGTCCGCTCCAGCGCCACGGCCGAGGACCTGCCCGGCGCGAGCTTTGCCGGCCAG CAGGACACCTACCTCTGGGTCCGTGGTGCGGACGAGGTGCTGCACAACATGCGGCGCTGCATCTCCAGCCTCTACACCGG CCGGGCGATAGCCTACCGGATCAACCAGGGGTATGCCGACGAGCAGGTGGCGATCAGCGTGGGGGTGCAGAAGATGGCCA ACTCGTTCACCGCCGGGGTGATGTTCACCCTTCACCCGGGCAACGGCGACCGCTCGGTGATCGTCATCGACTCCAACTAC GGGTTCGGCGAGTCGGTGGTTTCGGGGGAAGTGACCCCGGACAACTTCGTGGTCAACAAGATCACCATGGATATCCTGGA GCGGACCATTTCACAGAAGGATATCTACTACACGGTGGACCAGAAGACCCAGGTGTCCCGCCCCATCGAGGTCCCGTTCG AGCGGCAGAAGGTACAGTCGCTCATGGACGACGAGATCACCGAACTGGCCAAGATGGGAAAGCTGATCGAAAAACATTAC GGCCGCCCCATGGACATCGAATGGGCAGTGGACAAAGACCTCCCCTTCGGCGGCAACATCTTCATCCTGCAGGCGCGGCC GGAAACGGTCTGGAGCCAGAAACAGCAACCGCCGGGAGCAGCCAAGGGCGGCGCTTCCGCCATGGACTACATCCTGGCCA GCATGCTGGAAGGGAAGCGGCTGAACTAA
Upstream 100 bases:
>100_bases GACGAAGATCATCCGGACCGGCATGATGCTCCGGGTCGACGGCGCCACCGGCGTCGTCACCATAGACCGCTGAGAAAACC GGACAGAGGAGGCAATGGAC
Downstream 100 bases:
>100_bases CCCCTCGGAAGCCCACGGTTGCTTCACAAAACCCAACAGATAAGGAGGCAGTATGAGCACAACACAGCTTAAAGTGAAAG AGATCAACGAAGAACTCGAC
Product: pyruvate phosphate dikinase, PEP/pyruvate-binding
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSTAVNMHDKRWGNKYGTVRSAGKVTPLVCWFEECRKDSVPLVGGKCSSLGELISAGVRVPPGFALTTEGYRRFMTDAGI DREIQSMVSGLDAGDMEALENTSGAIREMIEAHPFSAEIEDLVAERYRKLAVRSCLPAVPVAVRSSATAEDLPGASFAGQ QDTYLWVRGADEVLHNMRRCISSLYTGRAIAYRINQGYADEQVAISVGVQKMANSFTAGVMFTLHPGNGDRSVIVIDSNY GFGESVVSGEVTPDNFVVNKITMDILERTISQKDIYYTVDQKTQVSRPIEVPFERQKVQSLMDDEITELAKMGKLIEKHY GRPMDIEWAVDKDLPFGGNIFILQARPETVWSQKQQPPGAAKGGASAMDYILASMLEGKRLN
Sequences:
>Translated_382_residues MSTAVNMHDKRWGNKYGTVRSAGKVTPLVCWFEECRKDSVPLVGGKCSSLGELISAGVRVPPGFALTTEGYRRFMTDAGI DREIQSMVSGLDAGDMEALENTSGAIREMIEAHPFSAEIEDLVAERYRKLAVRSCLPAVPVAVRSSATAEDLPGASFAGQ QDTYLWVRGADEVLHNMRRCISSLYTGRAIAYRINQGYADEQVAISVGVQKMANSFTAGVMFTLHPGNGDRSVIVIDSNY GFGESVVSGEVTPDNFVVNKITMDILERTISQKDIYYTVDQKTQVSRPIEVPFERQKVQSLMDDEITELAKMGKLIEKHY GRPMDIEWAVDKDLPFGGNIFILQARPETVWSQKQQPPGAAKGGASAMDYILASMLEGKRLN >Mature_381_residues STAVNMHDKRWGNKYGTVRSAGKVTPLVCWFEECRKDSVPLVGGKCSSLGELISAGVRVPPGFALTTEGYRRFMTDAGID REIQSMVSGLDAGDMEALENTSGAIREMIEAHPFSAEIEDLVAERYRKLAVRSCLPAVPVAVRSSATAEDLPGASFAGQQ DTYLWVRGADEVLHNMRRCISSLYTGRAIAYRINQGYADEQVAISVGVQKMANSFTAGVMFTLHPGNGDRSVIVIDSNYG FGESVVSGEVTPDNFVVNKITMDILERTISQKDIYYTVDQKTQVSRPIEVPFERQKVQSLMDDEITELAKMGKLIEKHYG RPMDIEWAVDKDLPFGGNIFILQARPETVWSQKQQPPGAAKGGASAMDYILASMLEGKRLN
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=344, Percent_Identity=42.1511627906977, Blast_Score=250, Evalue=1e-67, Organism=Caenorhabditis elegans, GI17564524, Length=321, Percent_Identity=30.2180685358255, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 42022; Mature: 41891
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVNMHDKRWGNKYGTVRSAGKVTPLVCWFEECRKDSVPLVGGKCSSLGELISAGVRV CCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC PPGFALTTEGYRRFMTDAGIDREIQSMVSGLDAGDMEALENTSGAIREMIEAHPFSAEIE CCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHH DLVAERYRKLAVRSCLPAVPVAVRSSATAEDLPGASFAGQQDTYLWVRGADEVLHNMRRC HHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHH ISSLYTGRAIAYRINQGYADEQVAISVGVQKMANSFTAGVMFTLHPGNGDRSVIVIDSNY HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCC GFGESVVSGEVTPDNFVVNKITMDILERTISQKDIYYTVDQKTQVSRPIEVPFERQKVQS CCCCHHCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHHH LMDDEITELAKMGKLIEKHYGRPMDIEWAVDKDLPFGGNIFILQARPETVWSQKQQPPGA HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCCCCC AKGGASAMDYILASMLEGKRLN CCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STAVNMHDKRWGNKYGTVRSAGKVTPLVCWFEECRKDSVPLVGGKCSSLGELISAGVRV CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC PPGFALTTEGYRRFMTDAGIDREIQSMVSGLDAGDMEALENTSGAIREMIEAHPFSAEIE CCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHH DLVAERYRKLAVRSCLPAVPVAVRSSATAEDLPGASFAGQQDTYLWVRGADEVLHNMRRC HHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHH ISSLYTGRAIAYRINQGYADEQVAISVGVQKMANSFTAGVMFTLHPGNGDRSVIVIDSNY HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCC GFGESVVSGEVTPDNFVVNKITMDILERTISQKDIYYTVDQKTQVSRPIEVPFERQKVQS CCCCHHCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCHHHHHHH LMDDEITELAKMGKLIEKHYGRPMDIEWAVDKDLPFGGNIFILQARPETVWSQKQQPPGA HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHCCCCCCCC AKGGASAMDYILASMLEGKRLN CCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7805870 [H]