| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is coaX
Identifier: 78223193
GI number: 78223193
Start: 2216008
End: 2216775
Strand: Reverse
Name: coaX
Synonym: Gmet_1986
Alternate gene names: 78223193
Gene position: 2216775-2216008 (Counterclockwise)
Preceding gene: 78223194
Following gene: 78223192
Centisome position: 55.46
GC content: 57.55
Gene sequence:
>768_bases ATGCTTCTCGTCATAGACGTGGGCAACACGAATATCGTTCTCGGCATCTATGACGGTCAGAGGCTTGTGCGTGACTGGCG CATATCCACCGACAAGGCCAAAACGTCAGACGAGTACGGAATCCTGATCCGTGAGCTTTTCCGTGGCGCCGACATCGAAT TCAAGGATGTGAAGGCCATTATTATTTCTTCGGTGGTGCCGACCCTGTCCGGAGTTCTGGAACGGCTTTCCCGGAACTAC TTCGGCTACAGTCCCCTTGTGGTTGGGCCGGGGATCAGGACCGGCATGCCGATCCAGTACGACAATCCCAAGGAGGTGGG GGCGGACCGGATTGTCAATGCGGTGGCAGGCTACGAGAAGTACAAGACGTCTCTGGTCATCGTCGATTTTGGCACCGCCA CCACCTTTGATTACGTGAACCGCAAGGGAGAATACTGCGGCGGCGCCATCGCCCCAGGGCTTGTCATATCTATGGAGGCC CTGTTCCAGAGGGCGAGCAAGCTTCCCCGCGTCGATATCGTGAAGCCTCCGGCAGTCATTGCCCGCAATACGGTCAATTC CATGCAGGCCGGCATCTTTTATGGGTATGTGGGGCTTGTGGACGAGATCGTGGCCAGGATGAAAGCAGAGAGCAAGGAAA CTCCACGGGTCATCGCCACGGGGGGGCTTGCCGGGCTGATCGCCCCCGAGTCAAAAACCATCGAGGCGGTGGAGGAGTAC CTCACGCTGGAGGGACTGCGGATACTGTACGAACGAAACAGGGAGTGA
Upstream 100 bases:
>100_bases TGCTGAGAACCGCTCATGGCACCCTTGAGCGGGTTCTGGCAGGGGATGTGACAATTGAAGGGTAAGGTGGCGCCGTGCTT TCTGTTCTGGAGGTAAACCC
Downstream 100 bases:
>100_bases GATGACGAGATAGCGCGGAAGTCAAAAGGTCGCCAGACCTATACCTTATCATCACGGGAGGATGTATGGGCAAGTATGAT ACCGCAAAGCTGAGAAACCT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLLVIDVGNTNIVLGIYDGQRLVRDWRISTDKAKTSDEYGILIRELFRGADIEFKDVKAIIISSVVPTLSGVLERLSRNY FGYSPLVVGPGIRTGMPIQYDNPKEVGADRIVNAVAGYEKYKTSLVIVDFGTATTFDYVNRKGEYCGGAIAPGLVISMEA LFQRASKLPRVDIVKPPAVIARNTVNSMQAGIFYGYVGLVDEIVARMKAESKETPRVIATGGLAGLIAPESKTIEAVEEY LTLEGLRILYERNRE
Sequences:
>Translated_255_residues MLLVIDVGNTNIVLGIYDGQRLVRDWRISTDKAKTSDEYGILIRELFRGADIEFKDVKAIIISSVVPTLSGVLERLSRNY FGYSPLVVGPGIRTGMPIQYDNPKEVGADRIVNAVAGYEKYKTSLVIVDFGTATTFDYVNRKGEYCGGAIAPGLVISMEA LFQRASKLPRVDIVKPPAVIARNTVNSMQAGIFYGYVGLVDEIVARMKAESKETPRVIATGGLAGLIAPESKTIEAVEEY LTLEGLRILYERNRE >Mature_255_residues MLLVIDVGNTNIVLGIYDGQRLVRDWRISTDKAKTSDEYGILIRELFRGADIEFKDVKAIIISSVVPTLSGVLERLSRNY FGYSPLVVGPGIRTGMPIQYDNPKEVGADRIVNAVAGYEKYKTSLVIVDFGTATTFDYVNRKGEYCGGAIAPGLVISMEA LFQRASKLPRVDIVKPPAVIARNTVNSMQAGIFYGYVGLVDEIVARMKAESKETPRVIATGGLAGLIAPESKTIEAVEEY LTLEGLRILYERNRE
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_GEOMG (Q39U59)
Other databases:
- EMBL: CP000148 - RefSeq: YP_384940.1 - ProteinModelPortal: Q39U59 - SMR: Q39U59 - STRING: Q39U59 - GeneID: 3739208 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_1986 - NMPDR: fig|269799.3.peg.1599 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: PAIVVDF - ProtClustDB: PRK13321 - BioCyc: GMET269799:GMET_1986-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 28029; Mature: 28029
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: ACT_SITE 109-109 BINDING 100-100 BINDING 132-132 BINDING 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVIDVGNTNIVLGIYDGQRLVRDWRISTDKAKTSDEYGILIRELFRGADIEFKDVKAI CEEEEEECCCEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH IISSVVPTLSGVLERLSRNYFGYSPLVVGPGIRTGMPIQYDNPKEVGADRIVNAVAGYEK HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YKTSLVIVDFGTATTFDYVNRKGEYCGGAIAPGLVISMEALFQRASKLPRVDIVKPPAVI HCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH ARNTVNSMQAGIFYGYVGLVDEIVARMKAESKETPRVIATGGLAGLIAPESKTIEAVEEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCHHHHHHHHH LTLEGLRILYERNRE HHHHHHHHHHHCCCC >Mature Secondary Structure MLLVIDVGNTNIVLGIYDGQRLVRDWRISTDKAKTSDEYGILIRELFRGADIEFKDVKAI CEEEEEECCCEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH IISSVVPTLSGVLERLSRNYFGYSPLVVGPGIRTGMPIQYDNPKEVGADRIVNAVAGYEK HHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YKTSLVIVDFGTATTFDYVNRKGEYCGGAIAPGLVISMEALFQRASKLPRVDIVKPPAVI HCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH ARNTVNSMQAGIFYGYVGLVDEIVARMKAESKETPRVIATGGLAGLIAPESKTIEAVEEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCHHHHHHHHH LTLEGLRILYERNRE HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA