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The map label for this gene is scpA [H]

Identifier: 78223166

GI number: 78223166

Start: 2184106

End: 2184906

Strand: Reverse

Name: scpA [H]

Synonym: Gmet_1959

Alternate gene names: 78223166

Gene position: 2184906-2184106 (Counterclockwise)

Preceding gene: 78223167

Following gene: 78223165

Centisome position: 54.66

GC content: 56.8

Gene sequence:

>801_bases
ATGAGCAACGGCGGGAATCTTGACCTCTACCAGGATGAGGAGAGCCCCTCCTATACGGTGAAGCTCGAGGTCTTCGAGGG
GCCCCTCGACCTCCTGCTCCACCTCATCAGGAAGAATGAGGTGGACATCTATGATATTCCCCTCTCAACAATCACGAAAG
AGTACCTTGAGTACATCAAGATGATGAAGGAGCTCAACCTGGAGATTGCCGGCGAGTTCCTCGTCATGGCATCAACTCTC
ATCCAGATCAAGTCGAAGACGCTTCTCCCGACGCCGGTCGATGAAGATGCCCCGGAAGAAGAGGAGGAAGACCCGCGGGC
CGAGCTGGTACGGCGTCTTCTCGAATACCAGAAGTACAAGGAAGCGGCAGTATCTCTGACCGGGCGGGATCTGCTCGGCC
GGGATACCTACGCCCGAAGCTTTATCTCCCCCGAGCTGGCGGAGATGCTGCCCGAGGAGGAACCGGTCGAGGTGGAACTG
TTCGAGCTGATAGAGGCATTCCGGAAGGTTCTCGACCGGGTTTCCGAGGAGAGCTTCCACGAGGTGGGGGCCGAGTCGAT
CACCATCGCCGAGCGGATCAACGAGATCCTCTCACTCCTGGAGGGGAAGGAATCGCTTCTCTTCGACGAGCTTTTTCCCG
AACACTTCAACAGAGATTTCCTCATTGCCACGTTCCTGGCCGTGCTTGAACTCTGCAAGCTCAAGATGGTGAAGGTGGTC
CAGGCAAACCGCTATGGCTCCATCTGGATACAGCCTGCGGTCATGGATGGGGAGGGGAGTCTCGTCGATGCCGAATCTTA
A

Upstream 100 bases:

>100_bases
AAAAGCCGGGGCTCGTGGCCGAAATCCTTGCCGAAGGGGAGGCCCGTGCCGCAACCGAGGCCGCGCGAACCATGGCCGAG
GTGCGGGACGCCCTCAATCT

Downstream 100 bases:

>100_bases
GTCCATTGTCGAAAGCCTCCTGTTCGTTGCCGATGCCCCGATGACCTTCGACCGTCTCTGCTCCTTCCTTGATGAGTTTG
ACCGGGGAGATATTCGGGAG

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSNGGNLDLYQDEESPSYTVKLEVFEGPLDLLLHLIRKNEVDIYDIPLSTITKEYLEYIKMMKELNLEIAGEFLVMASTL
IQIKSKTLLPTPVDEDAPEEEEEDPRAELVRRLLEYQKYKEAAVSLTGRDLLGRDTYARSFISPELAEMLPEEEPVEVEL
FELIEAFRKVLDRVSEESFHEVGAESITIAERINEILSLLEGKESLLFDELFPEHFNRDFLIATFLAVLELCKLKMVKVV
QANRYGSIWIQPAVMDGEGSLVDAES

Sequences:

>Translated_266_residues
MSNGGNLDLYQDEESPSYTVKLEVFEGPLDLLLHLIRKNEVDIYDIPLSTITKEYLEYIKMMKELNLEIAGEFLVMASTL
IQIKSKTLLPTPVDEDAPEEEEEDPRAELVRRLLEYQKYKEAAVSLTGRDLLGRDTYARSFISPELAEMLPEEEPVEVEL
FELIEAFRKVLDRVSEESFHEVGAESITIAERINEILSLLEGKESLLFDELFPEHFNRDFLIATFLAVLELCKLKMVKVV
QANRYGSIWIQPAVMDGEGSLVDAES
>Mature_265_residues
SNGGNLDLYQDEESPSYTVKLEVFEGPLDLLLHLIRKNEVDIYDIPLSTITKEYLEYIKMMKELNLEIAGEFLVMASTLI
QIKSKTLLPTPVDEDAPEEEEEDPRAELVRRLLEYQKYKEAAVSLTGRDLLGRDTYARSFISPELAEMLPEEEPVEVELF
ELIEAFRKVLDRVSEESFHEVGAESITIAERINEILSLLEGKESLLFDELFPEHFNRDFLIATFLAVLELCKLKMVKVVQ
ANRYGSIWIQPAVMDGEGSLVDAES

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30396; Mature: 30265

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGGNLDLYQDEESPSYTVKLEVFEGPLDLLLHLIRKNEVDIYDIPLSTITKEYLEYIK
CCCCCCCEEEECCCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
MMKELNLEIAGEFLVMASTLIQIKSKTLLPTPVDEDAPEEEEEDPRAELVRRLLEYQKYK
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EAAVSLTGRDLLGRDTYARSFISPELAEMLPEEEPVEVELFELIEAFRKVLDRVSEESFH
HHHHHHCCCHHHCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EVGAESITIAERINEILSLLEGKESLLFDELFPEHFNRDFLIATFLAVLELCKLKMVKVV
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QANRYGSIWIQPAVMDGEGSLVDAES
HCCCCCCEEEEEEEECCCCCEECCCC
>Mature Secondary Structure 
SNGGNLDLYQDEESPSYTVKLEVFEGPLDLLLHLIRKNEVDIYDIPLSTITKEYLEYIK
CCCCCCEEEECCCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
MMKELNLEIAGEFLVMASTLIQIKSKTLLPTPVDEDAPEEEEEDPRAELVRRLLEYQKYK
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EAAVSLTGRDLLGRDTYARSFISPELAEMLPEEEPVEVELFELIEAFRKVLDRVSEESFH
HHHHHHCCCHHHCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EVGAESITIAERINEILSLLEGKESLLFDELFPEHFNRDFLIATFLAVLELCKLKMVKVV
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QANRYGSIWIQPAVMDGEGSLVDAES
HCCCCCCEEEEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]