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The map label for this gene is 78223139

Identifier: 78223139

GI number: 78223139

Start: 2157306

End: 2158586

Strand: Reverse

Name: 78223139

Synonym: Gmet_1932

Alternate gene names: NA

Gene position: 2158586-2157306 (Counterclockwise)

Preceding gene: 78223140

Following gene: 78223138

Centisome position: 54.0

GC content: 58.16

Gene sequence:

>1281_bases
ATGAGAAACCTGCCGGCCTGCATCCTTGTGATTCTCTGCCTCCTTTGCGCGGGAGAACCTCTTCTCTCCCCGGTTGCCGC
AGCCGATCCCTTTCTCCATAACAAGTACGGTGTCGATCTCATCGAACGGGGTGAGATCGAAAAAGCCATCGAACAGCTGG
AAAAGGCGTACAGCCTATACTCATCGGATCCAATCCTGAAGGGGAACCTTGCCACGGCCTATGCCCTTCAGGGGCAGAGG
CTCCTGGACAGGAAGTCCTATGCCGACGCGGCGGGGCAGTTCGAGAAGGCCCTGGTGCTTTTTCCCGATGAGCCCCGGTA
TCATCTCCTTCGCGGCATCGCCTTTACCCTGGCAAAGAATTTCCCCCTGGCTCGCCATGAACTTCAGCAGGCTCGAAACC
TGGGGGGAGAAACTGCCGAGGGTCTTTATTTCCTGGGCCGGATTCACTATGAGGAGGGCGAAACGGACGAGGCCCTCCAG
AACTGGGAGAAAGCGGCAGCCCTGGCGCCATCGGATCCCTCGCTCGCAAAGTTGCTGGAAAGGATGCGCCGCGAACAGGC
CGTTGAAACCCGCATGGAGCGTGGCCACAGTTCCCGTTTTATCGTTTCCTACGACGCGGGGGAAGTGAAGACCGGCATCG
CCCTCGATGTGCTTGATGTGCTTGAAACCGCCTACAACAGTGTCGGCACCGATCTCGGCTACTTTCCCGAGGCCAGGGTG
CCGGTCATTCTCTATACGAAACGGGATTACCGGGAAGTGACCCGCTCCCCCAACTGGTCGGGGGGGCTCTACGACGGCAA
GATCCGCATACCCATAGGAGGTCTGGTCGAGATAACGCCGGATTTGCGGGCAACGCTGCGCCATGAATACACCCATGCGG
TCGTACGTGACCTGTCCAGGGGCAACTGTCCTGTCTGGCTGAATGAGGGGCTTGCGGAACTCCAGGGGAGACAGGAGTTG
AATCCTCCCTTGACGGAACTGGGGCGGGCGATCAGGACTGGCGGGTACCTTCCTTTGCGAAAACTCGAAAATGGGTTCAC
CTCCCTGGGAAGCAGCGAGGTGCGCCTTGCCTATGAGGAGAGTTACGCGGTGGTGAATTTCATGGTTTCCTCATACGGGT
GGTATCGAGTGAGGGGAATCCTGACATATATAGGGGAGGGGTTGCCAGTCGGCGAGGCGATCAACAGGGGACTTGCCGAT
CTGGGGCTGGACTATGATGGTGTTTTCGGCGAATGGCTGGAATACATGAAGCGTGAGTATGGAGGCGAGAAGCAGGGATA
A

Upstream 100 bases:

>100_bases
CTTTTCCTTTGCGGAGGAAGAGTTCTACGAACAAAACCCCGAGGAACGGCTTCGGATGCAGTTCGCGAATACCCCGCTCT
GGGGCTCGAAATAGATATCG

Downstream 100 bases:

>100_bases
GTAATTTATGTGCGAGAAAATATATTGACAGGTCTGAAAGCTTTAGGTATAAAAAGACTAAATTGGTCTTATAGGTGCTA
TTTATGATGGAGCTTACACG

Product: peptidase M, neutral zinc metallopeptidase, zinc-binding site

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRNLPACILVILCLLCAGEPLLSPVAAADPFLHNKYGVDLIERGEIEKAIEQLEKAYSLYSSDPILKGNLATAYALQGQR
LLDRKSYADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEALQ
NWEKAAALAPSDPSLAKLLERMRREQAVETRMERGHSSRFIVSYDAGEVKTGIALDVLDVLETAYNSVGTDLGYFPEARV
PVILYTKRDYREVTRSPNWSGGLYDGKIRIPIGGLVEITPDLRATLRHEYTHAVVRDLSRGNCPVWLNEGLAELQGRQEL
NPPLTELGRAIRTGGYLPLRKLENGFTSLGSSEVRLAYEESYAVVNFMVSSYGWYRVRGILTYIGEGLPVGEAINRGLAD
LGLDYDGVFGEWLEYMKREYGGEKQG

Sequences:

>Translated_426_residues
MRNLPACILVILCLLCAGEPLLSPVAAADPFLHNKYGVDLIERGEIEKAIEQLEKAYSLYSSDPILKGNLATAYALQGQR
LLDRKSYADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEALQ
NWEKAAALAPSDPSLAKLLERMRREQAVETRMERGHSSRFIVSYDAGEVKTGIALDVLDVLETAYNSVGTDLGYFPEARV
PVILYTKRDYREVTRSPNWSGGLYDGKIRIPIGGLVEITPDLRATLRHEYTHAVVRDLSRGNCPVWLNEGLAELQGRQEL
NPPLTELGRAIRTGGYLPLRKLENGFTSLGSSEVRLAYEESYAVVNFMVSSYGWYRVRGILTYIGEGLPVGEAINRGLAD
LGLDYDGVFGEWLEYMKREYGGEKQG
>Mature_426_residues
MRNLPACILVILCLLCAGEPLLSPVAAADPFLHNKYGVDLIERGEIEKAIEQLEKAYSLYSSDPILKGNLATAYALQGQR
LLDRKSYADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEALQ
NWEKAAALAPSDPSLAKLLERMRREQAVETRMERGHSSRFIVSYDAGEVKTGIALDVLDVLETAYNSVGTDLGYFPEARV
PVILYTKRDYREVTRSPNWSGGLYDGKIRIPIGGLVEITPDLRATLRHEYTHAVVRDLSRGNCPVWLNEGLAELQGRQEL
NPPLTELGRAIRTGGYLPLRKLENGFTSLGSSEVRLAYEESYAVVNFMVSSYGWYRVRGILTYIGEGLPVGEAINRGLAD
LGLDYDGVFGEWLEYMKREYGGEKQG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47541; Mature: 47541

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLPACILVILCLLCAGEPLLSPVAAADPFLHNKYGVDLIERGEIEKAIEQLEKAYSLY
CCCCHHHHHHHHHHHHCCCHHHCHHHHCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHH
SSDPILKGNLATAYALQGQRLLDRKSYADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKN
CCCCCEECCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHC
FPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEALQNWEKAAALAPSDPSLAKLLE
CCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
RMRREQAVETRMERGHSSRFIVSYDAGEVKTGIALDVLDVLETAYNSVGTDLGYFPEARV
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PVILYTKRDYREVTRSPNWSGGLYDGKIRIPIGGLVEITPDLRATLRHEYTHAVVRDLSR
CEEEEECHHHHHHHCCCCCCCCEECCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHC
GNCPVWLNEGLAELQGRQELNPPLTELGRAIRTGGYLPLRKLENGFTSLGSSEVRLAYEE
CCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEHH
SYAVVNFMVSSYGWYRVRGILTYIGEGLPVGEAINRGLADLGLDYDGVFGEWLEYMKREY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHC
GGEKQG
CCCCCC
>Mature Secondary Structure
MRNLPACILVILCLLCAGEPLLSPVAAADPFLHNKYGVDLIERGEIEKAIEQLEKAYSLY
CCCCHHHHHHHHHHHHCCCHHHCHHHHCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHH
SSDPILKGNLATAYALQGQRLLDRKSYADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKN
CCCCCEECCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHC
FPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEALQNWEKAAALAPSDPSLAKLLE
CCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
RMRREQAVETRMERGHSSRFIVSYDAGEVKTGIALDVLDVLETAYNSVGTDLGYFPEARV
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PVILYTKRDYREVTRSPNWSGGLYDGKIRIPIGGLVEITPDLRATLRHEYTHAVVRDLSR
CEEEEECHHHHHHHCCCCCCCCEECCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHC
GNCPVWLNEGLAELQGRQELNPPLTELGRAIRTGGYLPLRKLENGFTSLGSSEVRLAYEE
CCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEHH
SYAVVNFMVSSYGWYRVRGILTYIGEGLPVGEAINRGLADLGLDYDGVFGEWLEYMKREY
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHC
GGEKQG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA