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The map label for this gene is 78223076

Identifier: 78223076

GI number: 78223076

Start: 2081830

End: 2082891

Strand: Reverse

Name: 78223076

Synonym: Gmet_1869

Alternate gene names: NA

Gene position: 2082891-2081830 (Counterclockwise)

Preceding gene: 78223077

Following gene: 78223075

Centisome position: 52.11

GC content: 51.88

Gene sequence:

>1062_bases
ATGAAGTCTGTTCTTCATTCGTGTTCTGTACGGTACTTATTATATCTCTTGCTCGGTCTCATCCTTCTGGGTTGTGCTGG
AGTAGGCACCAGCCCCATTGCTCTCCATGACCCTGCAGTTGACCTTGTCTGGCCTCCGCCGCCTAATCCGCCCCGAATCC
GATTCCTCCGCGAAATAACCGGACCAGAACAGATTGTGCCGATTCAGAGTAAGGTTGGGCGCCTTTGGCAAATCGTTACC
GGGGAAGAGCGGGTGATGATACCCCTGATGACGCCATACGGATTAGCCAGTGACGGTGGCTCCCTCCTCTGCGTTGCGGA
TTCCTCTACACGGGTAGTACAGTGCTACGATCTGAATAATCGTGAAGTTTTCTACATCCGCCAAGCCGGGGACGAGCCGC
TCGCAAGTCCCGTTGGAGTGGCCTTTGATTCGAACGGTAATGTGCTGGTGTCTGATTCAATCAATGCCAGGGTATACGTT
TTTTCGCGCCAGGGAGAGTACCTTCGGGAGTTTGGCAACGGAGAGACCACGTTCAAAAGGCCGGCCGGGATTGCTGTTGC
CGGTAACGGTGATGTTTATGTGGTTGATGTGTTGGCACATAAATTGAAGAAGTTTGACAAGGATGGACATTATCGTGGGG
AGTTTCCCCGCGACGGGAGTGGCGAGCCACTCAGCTTGCCGTCCAACGTAGCGGTGGATAGGGAAGGAAACACCTACGTA
ACTGATTCCATGAACTTCACTATAAAAAAATATGATCGTAATGGAAATTTCCTTAGGAGTTTCGGCGAAGTCGGCGATGC
CCCCGGTTCATTCGCGCGACCGCGGGGGGTGGCCGTGGACAGCGAACTTCATGTTTATGCTGTGGATGCCTCATTCGATA
ATTTTCAGATATTTGATCAGGAAGGGAAACTCCTCCTTTTCGTGGGAAAGCCTGGTAACGGGCCGGGCGAGTTCTATCTC
CCGAGCGGATTATTCATAGACAAGCATGACCGGATCTTTGTTGCCGACACGTATAACAAACGTATCCAGATATTTGAGTA
CCTGAGGCAAGGCACGCCATGA

Upstream 100 bases:

>100_bases
CATTCCCAAAACGCGGGACAATGAACGGTAAGGCCGCTGCAGGGTGGGGGGGAGCGATGGCCGTCTTTTTTACCATCTGG
ATTGTGGGGATGATGCTGGC

Downstream 100 bases:

>100_bases
TGGTTAAAACAGACAACCTTTTTCCGGTTTTATTGTTTCTGATTGTTGTTTTTTTCGATACAGGCGCCGGTTTTGGTGCT
CAAGGCCCCAAGTTCACGGA

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; NHL Repeat Protein; Serine/Threonine Protein Kinase; Tripartite Motif-Containing Protein; Peptidylamidoglycolate Lyase; PA14 Domain-Containing Protein; ABC Transporter Related Protein; Serine/Threonine-Protein Kinase PknD; Ring Finger; Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Tetratricopeptide Repeat-Containing Protein; Leucine-Rich Repeat-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; NHL Repeat Domain-Containing Protein; PKD Domain Containing Protein; Cell Surface Protein; Copper Amine Oxidase Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; NHL Repeat Domain Protein; Surface Layer Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKSVLHSCSVRYLLYLLLGLILLGCAGVGTSPIALHDPAVDLVWPPPPNPPRIRFLREITGPEQIVPIQSKVGRLWQIVT
GEERVMIPLMTPYGLASDGGSLLCVADSSTRVVQCYDLNNREVFYIRQAGDEPLASPVGVAFDSNGNVLVSDSINARVYV
FSRQGEYLREFGNGETTFKRPAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREGNTYV
TDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQEGKLLLFVGKPGNGPGEFYL
PSGLFIDKHDRIFVADTYNKRIQIFEYLRQGTP

Sequences:

>Translated_353_residues
MKSVLHSCSVRYLLYLLLGLILLGCAGVGTSPIALHDPAVDLVWPPPPNPPRIRFLREITGPEQIVPIQSKVGRLWQIVT
GEERVMIPLMTPYGLASDGGSLLCVADSSTRVVQCYDLNNREVFYIRQAGDEPLASPVGVAFDSNGNVLVSDSINARVYV
FSRQGEYLREFGNGETTFKRPAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREGNTYV
TDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQEGKLLLFVGKPGNGPGEFYL
PSGLFIDKHDRIFVADTYNKRIQIFEYLRQGTP
>Mature_353_residues
MKSVLHSCSVRYLLYLLLGLILLGCAGVGTSPIALHDPAVDLVWPPPPNPPRIRFLREITGPEQIVPIQSKVGRLWQIVT
GEERVMIPLMTPYGLASDGGSLLCVADSSTRVVQCYDLNNREVFYIRQAGDEPLASPVGVAFDSNGNVLVSDSINARVYV
FSRQGEYLREFGNGETTFKRPAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREGNTYV
TDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQEGKLLLFVGKPGNGPGEFYL
PSGLFIDKHDRIFVADTYNKRIQIFEYLRQGTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84993742, Length=220, Percent_Identity=32.7272727272727, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI194248079, Length=211, Percent_Identity=34.1232227488152, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI194248081, Length=211, Percent_Identity=34.1232227488152, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI32454739, Length=259, Percent_Identity=31.2741312741313, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI32454737, Length=259, Percent_Identity=31.2741312741313, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17553622, Length=268, Percent_Identity=35.0746268656716, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71980716, Length=132, Percent_Identity=37.1212121212121, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71980713, Length=132, Percent_Identity=37.1212121212121, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17554338, Length=191, Percent_Identity=33.5078534031414, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI221330419, Length=263, Percent_Identity=33.8403041825095, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24655386, Length=263, Percent_Identity=33.8403041825095, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI22024206, Length=263, Percent_Identity=33.8403041825095, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI221330033, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI221330031, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24586266, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24586264, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI22026822, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI45552407, Length=188, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI19549884, Length=188, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17136846, Length=188, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38916; Mature: 38916

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51125 NHL L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVLHSCSVRYLLYLLLGLILLGCAGVGTSPIALHDPAVDLVWPPPPNPPRIRFLREIT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCHHHHHEECCC
GPEQIVPIQSKVGRLWQIVTGEERVMIPLMTPYGLASDGGSLLCVADSSTRVVQCYDLNN
CCCEEEEHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCC
REVFYIRQAGDEPLASPVGVAFDSNGNVLVSDSINARVYVFSRQGEYLREFGNGETTFKR
CEEEEEEECCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCHHHHHHCCCCCEEEC
PAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREGNTYV
CCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
TDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQ
ECCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEECC
EGKLLLFVGKPGNGPGEFYLPSGLFIDKHDRIFVADTYNKRIQIFEYLRQGTP
CCCEEEEEECCCCCCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKSVLHSCSVRYLLYLLLGLILLGCAGVGTSPIALHDPAVDLVWPPPPNPPRIRFLREIT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCCCHHHHHEECCC
GPEQIVPIQSKVGRLWQIVTGEERVMIPLMTPYGLASDGGSLLCVADSSTRVVQCYDLNN
CCCEEEEHHHHHCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCC
REVFYIRQAGDEPLASPVGVAFDSNGNVLVSDSINARVYVFSRQGEYLREFGNGETTFKR
CEEEEEEECCCCCCCCCCEEEECCCCCEEEECCCCEEEEEEECCCHHHHHHCCCCCEEEC
PAGIAVAGNGDVYVVDVLAHKLKKFDKDGHYRGEFPRDGSGEPLSLPSNVAVDREGNTYV
CCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
TDSMNFTIKKYDRNGNFLRSFGEVGDAPGSFARPRGVAVDSELHVYAVDASFDNFQIFDQ
ECCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEECCCCCEEEECC
EGKLLLFVGKPGNGPGEFYLPSGLFIDKHDRIFVADTYNKRIQIFEYLRQGTP
CCCEEEEEECCCCCCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA