| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223041
Identifier: 78223041
GI number: 78223041
Start: 2048206
End: 2049225
Strand: Reverse
Name: 78223041
Synonym: Gmet_1834
Alternate gene names: NA
Gene position: 2049225-2048206 (Counterclockwise)
Preceding gene: 78223042
Following gene: 78223040
Centisome position: 51.26
GC content: 54.61
Gene sequence:
>1020_bases ATGTTTTTTTCCAAGTTATTCCGGAAGGATGCAGCGTCATGTCTGGAAAAAGGCGAAAAGCTCCTGGCTGCCGGCCGCTT TGCTGAAGCACGGCTTTCCCTGGAGGACGCCCTTGAGCGGCTTGATGCTCATTCTCCCGAAGGCGCGACCACGGCTGCCG TCATCAGAGAGAAAATGGTTGTGGCGGGAAACCGTCTCGCCGAGATGAATCTTCAGGAGGCGGAACATTGCCTGAAAAGT GGAGAGTTTGCCAAAGCCGAGGAACACCTTAATTTGACTCTCGATCTGGCAGATGACGTAACCATAAGGGACAAGGCGGT AAAGTCTTTTGCGCTTCTGGAAAAGCAAATCCCCCATGTGCATCACCATGAGAAAAAGGGGGGGTGTGGCGGCTGTGGCG GATCAACGTCGCAACATTCCGAAAACATTGAGCTTGAAGACGATGGTTTGAATGACATGGACCGGTTCGAGCTCCTTGTT CGTCCGTTGCCGGGTGATTTGCCCGAACGTTATGCTGATCTGGGAGAGGAATTTGCAGGAGGGTATCTGGCAGCCCACGG CGGTGACCAGATGACTGCTGAAAAGGTGTTCGAGCGGTTGTTGGCCTCCGGAGAGAGCGACATTCTTCTTTATGAATTGG CAATTCTCTCGCATCAGGGAGGGGACGGGCGCCGTTGCGAGACCCTGTTGCGTCGGGCGCTTGCTTTGAACGACACTAAT CCTCTCTGCAACCTCAGCCTGGTGCAGTTGCTGACGGAAAATGGCCGCTTTACCGAAGCGGTGCCTCTTCTGGAACGGAT GGTTGAGCGGGACATATTGCCTGATCAGGCAGGGATGTTCCTGGGTGAAATATATCGGGTGCAGGGAGAGAGCGATCGAG CCATTGCCCAGTTTTCGCAACTTCTTTCAACGCCTCTCAAACGGGAAGCGGCTGAGAGGCTGGTGGGACTTCTGGAGACA ACCGGACGGTCCCAAGAGGCGGCTTTGGTCGCCAAGCAGTATCTGAAGGGGTGCTGTTAA
Upstream 100 bases:
>100_bases ATATTGAAAGTGTCACCTTGCTGAGTAGAGCCGACTGATCCCTGGCCGTTTTAACAGACTTCCCCATACGTTCACGATTT AACGAACAGGAGGATCCATC
Downstream 100 bases:
>100_bases AGATTCTTGGCGAATTTACTAAAGTTTTCGAGTCCGCATGCCGAAGAGCTTTCATGAGAGACGTACGTCTCTGCAATTCT TTCTCGATACCTAACCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MFFSKLFRKDAASCLEKGEKLLAAGRFAEARLSLEDALERLDAHSPEGATTAAVIREKMVVAGNRLAEMNLQEAEHCLKS GEFAKAEEHLNLTLDLADDVTIRDKAVKSFALLEKQIPHVHHHEKKGGCGGCGGSTSQHSENIELEDDGLNDMDRFELLV RPLPGDLPERYADLGEEFAGGYLAAHGGDQMTAEKVFERLLASGESDILLYELAILSHQGGDGRRCETLLRRALALNDTN PLCNLSLVQLLTENGRFTEAVPLLERMVERDILPDQAGMFLGEIYRVQGESDRAIAQFSQLLSTPLKREAAERLVGLLET TGRSQEAALVAKQYLKGCC
Sequences:
>Translated_339_residues MFFSKLFRKDAASCLEKGEKLLAAGRFAEARLSLEDALERLDAHSPEGATTAAVIREKMVVAGNRLAEMNLQEAEHCLKS GEFAKAEEHLNLTLDLADDVTIRDKAVKSFALLEKQIPHVHHHEKKGGCGGCGGSTSQHSENIELEDDGLNDMDRFELLV RPLPGDLPERYADLGEEFAGGYLAAHGGDQMTAEKVFERLLASGESDILLYELAILSHQGGDGRRCETLLRRALALNDTN PLCNLSLVQLLTENGRFTEAVPLLERMVERDILPDQAGMFLGEIYRVQGESDRAIAQFSQLLSTPLKREAAERLVGLLET TGRSQEAALVAKQYLKGCC >Mature_339_residues MFFSKLFRKDAASCLEKGEKLLAAGRFAEARLSLEDALERLDAHSPEGATTAAVIREKMVVAGNRLAEMNLQEAEHCLKS GEFAKAEEHLNLTLDLADDVTIRDKAVKSFALLEKQIPHVHHHEKKGGCGGCGGSTSQHSENIELEDDGLNDMDRFELLV RPLPGDLPERYADLGEEFAGGYLAAHGGDQMTAEKVFERLLASGESDILLYELAILSHQGGDGRRCETLLRRALALNDTN PLCNLSLVQLLTENGRFTEAVPLLERMVERDILPDQAGMFLGEIYRVQGESDRAIAQFSQLLSTPLKREAAERLVGLLET TGRSQEAALVAKQYLKGCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37246; Mature: 37246
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSKLFRKDAASCLEKGEKLLAAGRFAEARLSLEDALERLDAHSPEGATTAAVIREKMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VAGNRLAEMNLQEAEHCLKSGEFAKAEEHLNLTLDLADDVTIRDKAVKSFALLEKQIPHV HHCCHHHHCCHHHHHHHHHCCCCHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCH HHHEKKGGCGGCGGSTSQHSENIELEDDGLNDMDRFELLVRPLPGDLPERYADLGEEFAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC GYLAAHGGDQMTAEKVFERLLASGESDILLYELAILSHQGGDGRRCETLLRRALALNDTN CEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC PLCNLSLVQLLTENGRFTEAVPLLERMVERDILPDQAGMFLGEIYRVQGESDRAIAQFSQ CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LLSTPLKREAAERLVGLLETTGRSQEAALVAKQYLKGCC HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFFSKLFRKDAASCLEKGEKLLAAGRFAEARLSLEDALERLDAHSPEGATTAAVIREKMV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VAGNRLAEMNLQEAEHCLKSGEFAKAEEHLNLTLDLADDVTIRDKAVKSFALLEKQIPHV HHCCHHHHCCHHHHHHHHHCCCCHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCH HHHEKKGGCGGCGGSTSQHSENIELEDDGLNDMDRFELLVRPLPGDLPERYADLGEEFAG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCC GYLAAHGGDQMTAEKVFERLLASGESDILLYELAILSHQGGDGRRCETLLRRALALNDTN CEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC PLCNLSLVQLLTENGRFTEAVPLLERMVERDILPDQAGMFLGEIYRVQGESDRAIAQFSQ CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LLSTPLKREAAERLVGLLETTGRSQEAALVAKQYLKGCC HHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA