| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223008
Identifier: 78223008
GI number: 78223008
Start: 2015700
End: 2016197
Strand: Reverse
Name: 78223008
Synonym: Gmet_1801
Alternate gene names: NA
Gene position: 2016197-2015700 (Counterclockwise)
Preceding gene: 78223022
Following gene: 78223007
Centisome position: 50.44
GC content: 58.03
Gene sequence:
>498_bases ATGACAACAGGCCATAAAAAGATTCACCTGGAGAACAACACCATGAACGACCAGTCAGTGAACACGATCACCTTCGATGG CCCCTATCTCGACATTTTGCTCATGAAGCATCAAGGGCTCTGTTGCAGCCAGATCGTGGTCAAGCTGGTGTTGCGCGACC TGGGTCGGGACAACCCGGACCTGGTCAGGTCGATGGCGGCCCTCTGCAACGGTTTTTACGCCGGCGTCACCTGCGGGGTG CTCACCGGTGCGTCATGTGCGTTGTCACTGGCACTGGATGGTTCGAGGGAGAGGGAGATGCAGGACTCGGAGTTTCCCCT GCTGCTGGCTGAATTGTGGGACTGGTTCTCGGTCAGGGCGGAAAAAGAGTACGGCGGGATCAACTGCGATGAAATCCTGA AGGCGAGCCCCGACAAGCGGGCCTGCTCGGACCTGCTGCTGGCAACCATGGAGAAACTCCAGTCGATACTGGCGACCGTG GGCGGTACAGGTCAATGA
Upstream 100 bases:
>100_bases CTTATTTGCGTAAATTAGTACTACATTACTATTTTACTTGTCAAACAAAAAAATCTCGCTTAGTGTGCAAATATCTGTAA GGTGCCTTGTCTGCCCAAGA
Downstream 100 bases:
>100_bases CCACTCCGTTACCCCCTGTGAAACAAGCATGGAAGAAAGGGGTGCCGCGATGAATAGGACGCCGCTGGAGGGGTGGATAC GGGACAAGTTGCTTCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Redox-Active Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTTGHKKIHLENNTMNDQSVNTITFDGPYLDILLMKHQGLCCSQIVVKLVLRDLGRDNPDLVRSMAALCNGFYAGVTCGV LTGASCALSLALDGSREREMQDSEFPLLLAELWDWFSVRAEKEYGGINCDEILKASPDKRACSDLLLATMEKLQSILATV GGTGQ
Sequences:
>Translated_165_residues MTTGHKKIHLENNTMNDQSVNTITFDGPYLDILLMKHQGLCCSQIVVKLVLRDLGRDNPDLVRSMAALCNGFYAGVTCGV LTGASCALSLALDGSREREMQDSEFPLLLAELWDWFSVRAEKEYGGINCDEILKASPDKRACSDLLLATMEKLQSILATV GGTGQ >Mature_164_residues TTGHKKIHLENNTMNDQSVNTITFDGPYLDILLMKHQGLCCSQIVVKLVLRDLGRDNPDLVRSMAALCNGFYAGVTCGVL TGASCALSLALDGSREREMQDSEFPLLLAELWDWFSVRAEKEYGGINCDEILKASPDKRACSDLLLATMEKLQSILATVG GTGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18028; Mature: 17897
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGHKKIHLENNTMNDQSVNTITFDGPYLDILLMKHQGLCCSQIVVKLVLRDLGRDNPD CCCCCEEEEECCCCCCCCCCCEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCCHH LVRSMAALCNGFYAGVTCGVLTGASCALSLALDGSREREMQDSEFPLLLAELWDWFSVRA HHHHHHHHHCCHHHHHHHHHHHCCHHEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH EKEYGGINCDEILKASPDKRACSDLLLATMEKLQSILATVGGTGQ HCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTGHKKIHLENNTMNDQSVNTITFDGPYLDILLMKHQGLCCSQIVVKLVLRDLGRDNPD CCCCEEEEECCCCCCCCCCCEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHHCCCCHH LVRSMAALCNGFYAGVTCGVLTGASCALSLALDGSREREMQDSEFPLLLAELWDWFSVRA HHHHHHHHHCCHHHHHHHHHHHCCHHEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHH EKEYGGINCDEILKASPDKRACSDLLLATMEKLQSILATVGGTGQ HCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA