| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is paaK [H]
Identifier: 78223007
GI number: 78223007
Start: 2014298
End: 2015650
Strand: Reverse
Name: paaK [H]
Synonym: Gmet_1800
Alternate gene names: 78223007
Gene position: 2015650-2014298 (Counterclockwise)
Preceding gene: 78223008
Following gene: 78222998
Centisome position: 50.42
GC content: 64.23
Gene sequence:
>1353_bases ATGAATAGGACGCCGCTGGAGGGGTGGATACGGGACAAGTTGCTTCTGCCCGGCACGCAGGCACTGACGCGGAGCGACCT CGAGGCCTATCAGGTGCGAAAACTGCGGGAGGTGGTCGCCTATGCCCGGACGAAGAGCCCCTTCTACCGGAACCTTCTTG CCGAAATCGACGGTCGGGACGTGAAGGATCTGCAGGCATTCAGCCGCCTCCCCTTCACGACGCCGGACGATGTGCGAACC CAGGGGATGCGGATGCTCTGCGCCTCCCAGGACGAAATCGAACGGGTGGTCACCCTGCAAACCTCAGGGACCAGCGGCGA GGCAAAGCGGATATTTTTCACGGCAGAAGACCTGGAGCTGACGGTCGATTTTTTCCATCACGGCATGGCGACCATGGTCG CTGCCGGGGCAACCGTCATCATCTTTCTGCCCGGCGAACGACCCGACAGCGTTGGTGATCTGCTGGCTCGGGGATTGGCA CGGCTGGGGGTGAGGCCGGTCGCCTTTGGACCGGTACGGGACCCGATAGCGGCACGGGCGGAGATTCTGCGCCACCCTTC CCCTTGCCTGGTGGGGATACCGACCCAGATTCTTTCTCTGGCCCGTGGTGAGGGTGGCGAGGCGATTCCACGGGGCTGGG TGGAGAGCGTCCTTCTTTCCACGGACTACGTGCCCACGGCGATCGTGGAGGAACTGAAGCAGCACTGGGGCTGCCGGGTC TTCACCCACTACGGCATGACGGAAACCGGGCTGGGGGGAGGCGTGGAGTGTGAGGCAAGGGACGGCTACCATCTGCGCGA GGCCGACCTGTACACGGAAATCGTCGACCCGGCCACAGGCCGGCCGGTAGCCGATGGCGAGTTCGGGGAAGTGATCTTCA CGACCCTCACCCGAAGCGGGATGCCGCTCGTGAGGTACCGGACCGGGGATATGGCGAGGATGATGCCGGAATCCTGCCCC TGCGGCACGGTGCTGAAACGTCTCGGGCGGGTGCAGGGACGAATCGGGGCGACCGTGAGGCTCAGGGATGGGGCAAGCAT CGCCATGGCAACTCTGGACGAGGCGTTGCTTCCGATTCCCGGACTGCTGAACTTTACGGCCGAAATCGCCGATAACGGCG GCCGGGATCAACTCAACCTCTGTCTCCAGGCATGCGAGGGGCAGGAAGAACAGGTCGCCAGAGGGGCCGTTGCCGCCCTT GTGCGCGCCGAATCAAGCGATCCCCTGTTCCGGCAGGGGGGGCTGACGCTGGGGAGCATCACCTTCGACAGGGCCGGCTG GTTCACGACCGGCACCGGGAAACGGCAGATCAGGGATGTCCGGCAGGAGAACCAAGGTGCCGTAAGTGCATAA
Upstream 100 bases:
>100_bases ATGGAGAAACTCCAGTCGATACTGGCGACCGTGGGCGGTACAGGTCAATGACCACTCCGTTACCCCCTGTGAAACAAGCA TGGAAGAAAGGGGTGCCGCG
Downstream 100 bases:
>100_bases ATTCCTTCTGCAGGGTAATCGGCACGCGGTTGGGCACTCCCCGAAAGGTTGATCCGCTATCCTTTCTGATGTCGCTGAAC AATCCGACTTTGCCGATAAT
Product: coenzyme F390 synthetase-like
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MNRTPLEGWIRDKLLLPGTQALTRSDLEAYQVRKLREVVAYARTKSPFYRNLLAEIDGRDVKDLQAFSRLPFTTPDDVRT QGMRMLCASQDEIERVVTLQTSGTSGEAKRIFFTAEDLELTVDFFHHGMATMVAAGATVIIFLPGERPDSVGDLLARGLA RLGVRPVAFGPVRDPIAARAEILRHPSPCLVGIPTQILSLARGEGGEAIPRGWVESVLLSTDYVPTAIVEELKQHWGCRV FTHYGMTETGLGGGVECEARDGYHLREADLYTEIVDPATGRPVADGEFGEVIFTTLTRSGMPLVRYRTGDMARMMPESCP CGTVLKRLGRVQGRIGATVRLRDGASIAMATLDEALLPIPGLLNFTAEIADNGGRDQLNLCLQACEGQEEQVARGAVAAL VRAESSDPLFRQGGLTLGSITFDRAGWFTTGTGKRQIRDVRQENQGAVSA
Sequences:
>Translated_450_residues MNRTPLEGWIRDKLLLPGTQALTRSDLEAYQVRKLREVVAYARTKSPFYRNLLAEIDGRDVKDLQAFSRLPFTTPDDVRT QGMRMLCASQDEIERVVTLQTSGTSGEAKRIFFTAEDLELTVDFFHHGMATMVAAGATVIIFLPGERPDSVGDLLARGLA RLGVRPVAFGPVRDPIAARAEILRHPSPCLVGIPTQILSLARGEGGEAIPRGWVESVLLSTDYVPTAIVEELKQHWGCRV FTHYGMTETGLGGGVECEARDGYHLREADLYTEIVDPATGRPVADGEFGEVIFTTLTRSGMPLVRYRTGDMARMMPESCP CGTVLKRLGRVQGRIGATVRLRDGASIAMATLDEALLPIPGLLNFTAEIADNGGRDQLNLCLQACEGQEEQVARGAVAAL VRAESSDPLFRQGGLTLGSITFDRAGWFTTGTGKRQIRDVRQENQGAVSA >Mature_450_residues MNRTPLEGWIRDKLLLPGTQALTRSDLEAYQVRKLREVVAYARTKSPFYRNLLAEIDGRDVKDLQAFSRLPFTTPDDVRT QGMRMLCASQDEIERVVTLQTSGTSGEAKRIFFTAEDLELTVDFFHHGMATMVAAGATVIIFLPGERPDSVGDLLARGLA RLGVRPVAFGPVRDPIAARAEILRHPSPCLVGIPTQILSLARGEGGEAIPRGWVESVLLSTDYVPTAIVEELKQHWGCRV FTHYGMTETGLGGGVECEARDGYHLREADLYTEIVDPATGRPVADGEFGEVIFTTLTRSGMPLVRYRTGDMARMMPESCP CGTVLKRLGRVQGRIGATVRLRDGASIAMATLDEALLPIPGLLNFTAEIADNGGRDQLNLCLQACEGQEEQVARGAVAAL VRAESSDPLFRQGGLTLGSITFDRAGWFTTGTGKRQIRDVRQENQGAVSA
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=374, Percent_Identity=27.0053475935829, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 49045; Mature: 49045
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTPLEGWIRDKLLLPGTQALTRSDLEAYQVRKLREVVAYARTKSPFYRNLLAEIDGRD CCCCCCCHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC VKDLQAFSRLPFTTPDDVRTQGMRMLCASQDEIERVVTLQTSGTSGEAKRIFFTAEDLEL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCCEEEEEEECCCEE TVDFFHHGMATMVAAGATVIIFLPGERPDSVGDLLARGLARLGVRPVAFGPVRDPIAARA EHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH EILRHPSPCLVGIPTQILSLARGEGGEAIPRGWVESVLLSTDYVPTAIVEELKQHWGCRV HHHHCCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE FTHYGMTETGLGGGVECEARDGYHLREADLYTEIVDPATGRPVADGEFGEVIFTTLTRSG EEECCCCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC MPLVRYRTGDMARMMPESCPCGTVLKRLGRVQGRIGATVRLRDGASIAMATLDEALLPIP CCEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCC GLLNFTAEIADNGGRDQLNLCLQACEGQEEQVARGAVAALVRAESSDPLFRQGGLTLGSI CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEE TFDRAGWFTTGTGKRQIRDVRQENQGAVSA EECCCCCEECCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRTPLEGWIRDKLLLPGTQALTRSDLEAYQVRKLREVVAYARTKSPFYRNLLAEIDGRD CCCCCCCHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC VKDLQAFSRLPFTTPDDVRTQGMRMLCASQDEIERVVTLQTSGTSGEAKRIFFTAEDLEL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCEEEEEEECCCCCCCEEEEEEECCCEE TVDFFHHGMATMVAAGATVIIFLPGERPDSVGDLLARGLARLGVRPVAFGPVRDPIAARA EHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH EILRHPSPCLVGIPTQILSLARGEGGEAIPRGWVESVLLSTDYVPTAIVEELKQHWGCRV HHHHCCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE FTHYGMTETGLGGGVECEARDGYHLREADLYTEIVDPATGRPVADGEFGEVIFTTLTRSG EEECCCCCCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC MPLVRYRTGDMARMMPESCPCGTVLKRLGRVQGRIGATVRLRDGASIAMATLDEALLPIP CCEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCC GLLNFTAEIADNGGRDQLNLCLQACEGQEEQVARGAVAALVRAESSDPLFRQGGLTLGSI CHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEE TFDRAGWFTTGTGKRQIRDVRQENQGAVSA EECCCCCEECCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]