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The map label for this gene is 78222981

Identifier: 78222981

GI number: 78222981

Start: 1987435

End: 1988337

Strand: Direct

Name: 78222981

Synonym: Gmet_1772

Alternate gene names: NA

Gene position: 1987435-1988337 (Clockwise)

Preceding gene: 78222980

Following gene: 78222982

Centisome position: 49.72

GC content: 64.67

Gene sequence:

>903_bases
ATGCGGTACATAGATCTTTATCAAGCAGGCGAATTGCTGAAGCGGGTCAGGGAGGCTTACGCACGGCTCCGCTCTTGCGA
CCTCTGTCCCCACGACTGCCGGGTGAACCGGCTGACCGGTGAGACCGGCGTCTGCCGGGCAGGGTGGCGGCCTCGGATCG
CCTCGGCCAACGTCCACCACGGTGAAGAGCCCCCCATTTCGGGCTCACAGGGGTCGGGGACGATCTTTCTCTCCTGGTGC
AGCCTCCACTGCCGGTTCTGCCAGAACTTCCCCATCAGCCAACAGGGGAACGGGAGCGATCTGACCACGCTGGAACTGGC
GGAGCGGATGCTCGGGCTTCAGAAACGCGGGGTGCACAACATCAACTTCGTCACTCCGACCCATTTCCTGCCGCAGATTC
TGGCAGCCCTCTGGCTGGCGATCCCCTGCGGGTTCCGGCTCCCCATCGTCTGGAACTCCAGCGGCTACGAGAAGATAGAT
GCCCTCCAACTCTTGGACGGTGTCGTGGACATCTATCTGCCGGACATGAAATACGTGGCGGAAGAGCCGGCGGTCCGGTT
CTCCTCGGCCCCCGGCTACCGGGAGGTGAATCGGCGGGCGGTTGCCGAGATGCTCCGCCAGGTGGGGCACCTGGTGCTGG
ACGACGAGGGGATCGCGGTGCGCGGTCTCATCATCCGTCACCTGGTGCTGCCGGAGGGGGCGGCCAGCAGCGGCGAGACC
CTGCGCTGGATCGCCGCGAACTTGGGTAGCGAGACCCACATCGCCTTGATGAACCAGTTTTTCCCGGCTCACCGGGCTGC
CGAGACGCCGGGTATCCACCGCAAGGTCACTGACGAGGAGTACGACGAAGCGGTGGAGGCCCTGGAGGAAGCCGGTCTGG
AGAACGGCTGGGTGCAGGATTGA

Upstream 100 bases:

>100_bases
CTATCTGTTCGGGCGGTTCGTGGAACTGATGGAGAAACATAAATCGTAGGGGCGCAATTCGTTGCGCCCTGAGCGTGATC
AATCACGCTCCTACACAACC

Downstream 100 bases:

>100_bases
CATGCGAACGATTGTTTTGCTGGCGCTTTCCAATATCTTCATGACCTTTGCCTGGTATGCGCACCTGAAGAACCTGAGGG
CCGCCCCCTGGTACATCGCG

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRYIDLYQAGELLKRVREAYARLRSCDLCPHDCRVNRLTGETGVCRAGWRPRIASANVHHGEEPPISGSQGSGTIFLSWC
SLHCRFCQNFPISQQGNGSDLTTLELAERMLGLQKRGVHNINFVTPTHFLPQILAALWLAIPCGFRLPIVWNSSGYEKID
ALQLLDGVVDIYLPDMKYVAEEPAVRFSSAPGYREVNRRAVAEMLRQVGHLVLDDEGIAVRGLIIRHLVLPEGAASSGET
LRWIAANLGSETHIALMNQFFPAHRAAETPGIHRKVTDEEYDEAVEALEEAGLENGWVQD

Sequences:

>Translated_300_residues
MRYIDLYQAGELLKRVREAYARLRSCDLCPHDCRVNRLTGETGVCRAGWRPRIASANVHHGEEPPISGSQGSGTIFLSWC
SLHCRFCQNFPISQQGNGSDLTTLELAERMLGLQKRGVHNINFVTPTHFLPQILAALWLAIPCGFRLPIVWNSSGYEKID
ALQLLDGVVDIYLPDMKYVAEEPAVRFSSAPGYREVNRRAVAEMLRQVGHLVLDDEGIAVRGLIIRHLVLPEGAASSGET
LRWIAANLGSETHIALMNQFFPAHRAAETPGIHRKVTDEEYDEAVEALEEAGLENGWVQD
>Mature_300_residues
MRYIDLYQAGELLKRVREAYARLRSCDLCPHDCRVNRLTGETGVCRAGWRPRIASANVHHGEEPPISGSQGSGTIFLSWC
SLHCRFCQNFPISQQGNGSDLTTLELAERMLGLQKRGVHNINFVTPTHFLPQILAALWLAIPCGFRLPIVWNSSGYEKID
ALQLLDGVVDIYLPDMKYVAEEPAVRFSSAPGYREVNRRAVAEMLRQVGHLVLDDEGIAVRGLIIRHLVLPEGAASSGET
LRWIAANLGSETHIALMNQFFPAHRAAETPGIHRKVTDEEYDEAVEALEEAGLENGWVQD

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33423; Mature: 33423

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYIDLYQAGELLKRVREAYARLRSCDLCPHDCRVNRLTGETGVCRAGWRPRIASANVHH
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
GEEPPISGSQGSGTIFLSWCSLHCRFCQNFPISQQGNGSDLTTLELAERMLGLQKRGVHN
CCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
INFVTPTHFLPQILAALWLAIPCGFRLPIVWNSSGYEKIDALQLLDGVVDIYLPDMKYVA
CEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHH
EEPAVRFSSAPGYREVNRRAVAEMLRQVGHLVLDDEGIAVRGLIIRHLVLPEGAASSGET
CCCCCEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCH
LRWIAANLGSETHIALMNQFFPAHRAAETPGIHRKVTDEEYDEAVEALEEAGLENGWVQD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRYIDLYQAGELLKRVREAYARLRSCDLCPHDCRVNRLTGETGVCRAGWRPRIASANVHH
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
GEEPPISGSQGSGTIFLSWCSLHCRFCQNFPISQQGNGSDLTTLELAERMLGLQKRGVHN
CCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
INFVTPTHFLPQILAALWLAIPCGFRLPIVWNSSGYEKIDALQLLDGVVDIYLPDMKYVA
CEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHH
EEPAVRFSSAPGYREVNRRAVAEMLRQVGHLVLDDEGIAVRGLIIRHLVLPEGAASSGET
CCCCCEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCH
LRWIAANLGSETHIALMNQFFPAHRAAETPGIHRKVTDEEYDEAVEALEEAGLENGWVQD
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]