| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222957
Identifier: 78222957
GI number: 78222957
Start: 1964536
End: 1964928
Strand: Direct
Name: 78222957
Synonym: Gmet_1748
Alternate gene names: NA
Gene position: 1964536-1964928 (Clockwise)
Preceding gene: 78222956
Following gene: 78222959
Centisome position: 49.15
GC content: 52.67
Gene sequence:
>393_bases ATGGGAGCAAAAGAGATTACGGTTGTGTTTTACCGTCAGAATCACATGAGAGACAACTGGAAAGTGGATCTCGACGGTGT TGAGGCGGAACGTTTCTTCGGCAAGCTGGAGGGAGACCTCTCCCGTGCCGGGGTCGTACTGAAGAGATCCCGCAACGAAG CCTTTACCATAGACATCAACAGCTATGCCGACCTGTTAAATGCGGTAAGAATTTCCTCACCCGCTGATGGCTTCGGTAGC GTCTGCATCGGGCACATAATCGGGCAAAGCCAGAATCTCGACATTATGGACGACATCCGACGTGCCGTGATGAGAATCGC CTTTGCGCCGGAGACTGTTCCTCCAGAGGACCATAACCGGAAGGTATGTCACAACTGCGGTTGTGGCTGTTGA
Upstream 100 bases:
>100_bases TACGAAGCACGGCAGAAGGCCGTGCTCGACATGGTATTCAGTTCACTTCAGCGCAAGGCGGCGGGGAGATAAGGATAATT CCGTGCAGGAGGATCTGCCG
Downstream 100 bases:
>100_bases GCACTATGCTGAGTCAGTCCTGGAGCGGCGTCACAGGCACAATGCTTGCGGAGAGGGTGCCGTTTTCAAGTGAAAGAAGA GCGAAGCTCGGTTTGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGAKEITVVFYRQNHMRDNWKVDLDGVEAERFFGKLEGDLSRAGVVLKRSRNEAFTIDINSYADLLNAVRISSPADGFGS VCIGHIIGQSQNLDIMDDIRRAVMRIAFAPETVPPEDHNRKVCHNCGCGC
Sequences:
>Translated_130_residues MGAKEITVVFYRQNHMRDNWKVDLDGVEAERFFGKLEGDLSRAGVVLKRSRNEAFTIDINSYADLLNAVRISSPADGFGS VCIGHIIGQSQNLDIMDDIRRAVMRIAFAPETVPPEDHNRKVCHNCGCGC >Mature_129_residues GAKEITVVFYRQNHMRDNWKVDLDGVEAERFFGKLEGDLSRAGVVLKRSRNEAFTIDINSYADLLNAVRISSPADGFGSV CIGHIIGQSQNLDIMDDIRRAVMRIAFAPETVPPEDHNRKVCHNCGCGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14483; Mature: 14351
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKEITVVFYRQNHMRDNWKVDLDGVEAERFFGKLEGDLSRAGVVLKRSRNEAFTIDIN CCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCCHHHHCEEEEECCCCEEEEECH SYADLLNAVRISSPADGFGSVCIGHIIGQSQNLDIMDDIRRAVMRIAFAPETVPPEDHNR HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC KVCHNCGCGC CHHCCCCCCC >Mature Secondary Structure GAKEITVVFYRQNHMRDNWKVDLDGVEAERFFGKLEGDLSRAGVVLKRSRNEAFTIDIN CCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHCCCHHHHCEEEEECCCCEEEEECH SYADLLNAVRISSPADGFGSVCIGHIIGQSQNLDIMDDIRRAVMRIAFAPETVPPEDHNR HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC KVCHNCGCGC CHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA