Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is 78222859

Identifier: 78222859

GI number: 78222859

Start: 1852920

End: 1854419

Strand: Direct

Name: 78222859

Synonym: Gmet_1650

Alternate gene names: NA

Gene position: 1852920-1854419 (Clockwise)

Preceding gene: 78222857

Following gene: 78222860

Centisome position: 46.35

GC content: 56.67

Gene sequence:

>1500_bases
ATGAAACGGATGTGTGCTGCCCTGTGCCTCTGTCTTGCCGCGGTCCCAGCTTCGGCTGCGGAAGGCCAGATCTCACTGCC
CCTTGCGGAGGCAGTCAGGAGTGCCGTCGAAAAGAATCTTGACGTTAAAGCCGAGCTTTACAATCCCGCCATGGCCCAGG
CCGATATCCGGAAGAACGAAGGGATCTATGACACAACCCTCCGTTTGACCACGGATTTCAACTATTCAGTTACTGAACCA
GCCAGCTCATTTCTTACCGGCAGTCTCACTAACCGGCAGAAAACCTTCGATATCAATCCTGGCATAAGCCAGCTCATACC
GATAGGCGGAACCCTCGGGCTGACCTTCAACAACACGTACAACAGCAATAATTCTACGAGATCCTTCAATAATTACTGGA
ATTCCGACCTTACCGTGAACCTTACCCAGCCGTTGTTGAAAAATTTCGGCAGGGAACCGACCGAGCTTGCCATCATGGTG
GCGCGAAACAGCAAGGGGGAGTCCCTGGAGCGCTTCAGGACCACGCTTTCTGACACGGTTGCGCGGGTGAGGAATGAGTA
CTTCAAGCTCTACAGCCTGCGCGGGGATCTGGAGGTGAAAACCACCTCTTTGCTCCTGGCCCGGAAGATTCTCGACGACA
CCAAGGCTCGGGTAAAGGCGGGGGTTCTGCCTGCCATGGAGATCCTTAATGCCGAGTTTGGGGTGGCGAGCCGGGAGAAG
GATCTGATCGATGCGGAAAAGGCGGTGCGCGACCAGAATGACGTGCTGAGGGTGCTCCTGCAGCTTACGGGCAGGGACGA
GATTGTCCCGGTCGACATGCCGACGAAAGAACCCTTCGCCGTCAACGAGAAGGAGATGGTCAAGCGCGCCCTGGACAATC
GCTCCGAAATCAGAGAGCAGTTGGCCGCCCTCAAATCGAGGGAGCTTGAAATGCGGGTGGCCCACAACAGGACGCTTCCC
GACCTGAACCTGAGCGCCAGCGCTGCGCTGACCGGCCTTGATTCCCACTACAACCGGGATATGGAAAAGATCGGTTCGGC
TGATTATCCGGTTTGGGGCGTAGGATTGCAGTTCGCGTATCCCTTGGGCAACAATGCCGCCGAGAACGATTACATCAGAA
GCAAGCTCCGCTTGGAGCAAGCCAGGACCCAGGTGCGCAGCCTCGAAGCGAATGTGGAGAACGATGTCAAGGCAGCCATC
CGGGGGGTGGAGTCGGGATACAAGCAAATTGATGTTACCGAGCGGGGCAGGGCCTTTGCCGAAGAGCGGCTTCGGTCCTT
CATCAAGAAGAACGAAGTGGGGCTTGCCACCACAAAGGATGTACTCGATGTGGAAAACGATCTGGCCGCAGCCAAGATCA
ACCAGATCAATGCCTTGGTCGGGTACACCGATGCCATAACCCAGCTCTGGCGGACCACGGGAGAAATCCTCGACCGGACA
GGGGTTCAGTTGTCGGACACGGAGGGTGATTCCCTCTACGAGCGGCACGTCCACAACTGA

Upstream 100 bases:

>100_bases
CAGGGCTCTATCGTTTATTTGACAATGGAAGAAAAAAACCGTTCGACCCCAAAAGGGAACAAACGCACTGCTTGATGGCC
ATTTGAGGAGGAATTGACGA

Downstream 100 bases:

>100_bases
AACCATCCTCTCATCGCTCCAAACCCACCGGAGATACACCATGAATCTATCTCTCTCGCCCCGCGACCCGTCGAGAAGCG
GCATCCTGTCCCGTCGCGTT

Product: Outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Acriflavin Resistance Protein; Outer Membrane Protein-Like; Outer Membrane Lipoprotein; RND Family Efflux Pump Outer Membrane Protein; Outer Membrane Channel Protein; Outer Membrane Protein-Like Protein; Outer Membrane Efflux Protein Family; Outer Efflux Pump Domain-Containing Protein

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKRMCAALCLCLAAVPASAAEGQISLPLAEAVRSAVEKNLDVKAELYNPAMAQADIRKNEGIYDTTLRLTTDFNYSVTEP
ASSFLTGSLTNRQKTFDINPGISQLIPIGGTLGLTFNNTYNSNNSTRSFNNYWNSDLTVNLTQPLLKNFGREPTELAIMV
ARNSKGESLERFRTTLSDTVARVRNEYFKLYSLRGDLEVKTTSLLLARKILDDTKARVKAGVLPAMEILNAEFGVASREK
DLIDAEKAVRDQNDVLRVLLQLTGRDEIVPVDMPTKEPFAVNEKEMVKRALDNRSEIREQLAALKSRELEMRVAHNRTLP
DLNLSASAALTGLDSHYNRDMEKIGSADYPVWGVGLQFAYPLGNNAAENDYIRSKLRLEQARTQVRSLEANVENDVKAAI
RGVESGYKQIDVTERGRAFAEERLRSFIKKNEVGLATTKDVLDVENDLAAAKINQINALVGYTDAITQLWRTTGEILDRT
GVQLSDTEGDSLYERHVHN

Sequences:

>Translated_499_residues
MKRMCAALCLCLAAVPASAAEGQISLPLAEAVRSAVEKNLDVKAELYNPAMAQADIRKNEGIYDTTLRLTTDFNYSVTEP
ASSFLTGSLTNRQKTFDINPGISQLIPIGGTLGLTFNNTYNSNNSTRSFNNYWNSDLTVNLTQPLLKNFGREPTELAIMV
ARNSKGESLERFRTTLSDTVARVRNEYFKLYSLRGDLEVKTTSLLLARKILDDTKARVKAGVLPAMEILNAEFGVASREK
DLIDAEKAVRDQNDVLRVLLQLTGRDEIVPVDMPTKEPFAVNEKEMVKRALDNRSEIREQLAALKSRELEMRVAHNRTLP
DLNLSASAALTGLDSHYNRDMEKIGSADYPVWGVGLQFAYPLGNNAAENDYIRSKLRLEQARTQVRSLEANVENDVKAAI
RGVESGYKQIDVTERGRAFAEERLRSFIKKNEVGLATTKDVLDVENDLAAAKINQINALVGYTDAITQLWRTTGEILDRT
GVQLSDTEGDSLYERHVHN
>Mature_499_residues
MKRMCAALCLCLAAVPASAAEGQISLPLAEAVRSAVEKNLDVKAELYNPAMAQADIRKNEGIYDTTLRLTTDFNYSVTEP
ASSFLTGSLTNRQKTFDINPGISQLIPIGGTLGLTFNNTYNSNNSTRSFNNYWNSDLTVNLTQPLLKNFGREPTELAIMV
ARNSKGESLERFRTTLSDTVARVRNEYFKLYSLRGDLEVKTTSLLLARKILDDTKARVKAGVLPAMEILNAEFGVASREK
DLIDAEKAVRDQNDVLRVLLQLTGRDEIVPVDMPTKEPFAVNEKEMVKRALDNRSEIREQLAALKSRELEMRVAHNRTLP
DLNLSASAALTGLDSHYNRDMEKIGSADYPVWGVGLQFAYPLGNNAAENDYIRSKLRLEQARTQVRSLEANVENDVKAAI
RGVESGYKQIDVTERGRAFAEERLRSFIKKNEVGLATTKDVLDVENDLAAAKINQINALVGYTDAITQLWRTTGEILDRT
GVQLSDTEGDSLYERHVHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55539; Mature: 55539

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMCAALCLCLAAVPASAAEGQISLPLAEAVRSAVEKNLDVKAELYNPAMAQADIRKNE
CHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCC
GIYDTTLRLTTDFNYSVTEPASSFLTGSLTNRQKTFDINPGISQLIPIGGTLGLTFNNTY
CCEEEEEEEEECCCCEECCCHHHHHCCCCCCCCEEEECCCCHHHHCCCCCEEEEEECCCC
NSNNSTRSFNNYWNSDLTVNLTQPLLKNFGREPTELAIMVARNSKGESLERFRTTLSDTV
CCCCCCCCHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
ARVRNEYFKLYSLRGDLEVKTTSLLLARKILDDTKARVKAGVLPAMEILNAEFGVASREK
HHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHH
DLIDAEKAVRDQNDVLRVLLQLTGRDEIVPVDMPTKEPFAVNEKEMVKRALDNRSEIREQ
HHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
LAALKSRELEMRVAHNRTLPDLNLSASAALTGLDSHYNRDMEKIGSADYPVWGVGLQFAY
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEECCEEEEE
PLGNNAAENDYIRSKLRLEQARTQVRSLEANVENDVKAAIRGVESGYKQIDVTERGRAFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECHHHHHHHHH
EERLRSFIKKNEVGLATTKDVLDVENDLAAAKINQINALVGYTDAITQLWRTTGEILDRT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVQLSDTEGDSLYERHVHN
CCEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MKRMCAALCLCLAAVPASAAEGQISLPLAEAVRSAVEKNLDVKAELYNPAMAQADIRKNE
CHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCC
GIYDTTLRLTTDFNYSVTEPASSFLTGSLTNRQKTFDINPGISQLIPIGGTLGLTFNNTY
CCEEEEEEEEECCCCEECCCHHHHHCCCCCCCCEEEECCCCHHHHCCCCCEEEEEECCCC
NSNNSTRSFNNYWNSDLTVNLTQPLLKNFGREPTELAIMVARNSKGESLERFRTTLSDTV
CCCCCCCCHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
ARVRNEYFKLYSLRGDLEVKTTSLLLARKILDDTKARVKAGVLPAMEILNAEFGVASREK
HHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHH
DLIDAEKAVRDQNDVLRVLLQLTGRDEIVPVDMPTKEPFAVNEKEMVKRALDNRSEIREQ
HHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
LAALKSRELEMRVAHNRTLPDLNLSASAALTGLDSHYNRDMEKIGSADYPVWGVGLQFAY
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCEEECCEEEEE
PLGNNAAENDYIRSKLRLEQARTQVRSLEANVENDVKAAIRGVESGYKQIDVTERGRAFA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECHHHHHHHHH
EERLRSFIKKNEVGLATTKDVLDVENDLAAAKINQINALVGYTDAITQLWRTTGEILDRT
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GVQLSDTEGDSLYERHVHN
CCEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA