| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is fabH [H]
Identifier: 78222809
GI number: 78222809
Start: 1800102
End: 1801082
Strand: Direct
Name: fabH [H]
Synonym: Gmet_1599
Alternate gene names: 78222809
Gene position: 1800102-1801082 (Clockwise)
Preceding gene: 78222808
Following gene: 78222810
Centisome position: 45.03
GC content: 53.52
Gene sequence:
>981_bases ATGGCCAGAGCGAGAATTATCGGCACAGGTTCGGCCGTGCCTGAGATGATACGGACTAATTTCGACCTGGAAAAGATGGT CGACACCACCGACGACTGGATTACCACCAGGACTGGCATCAGGGAGCGGCGCATCGCTGCTGAAGGCGAATATACTTCAA CTTTCGCAACCCGTGCGGCTGAGCGGGCTCTCGAGATGGCTGGTGTTACTGCTGAAGAAATTGATCTCCTCATTGTTGCG ACCGTCACCCCAGATTTTCCCTTTCCATCTACCGCATGCATAGTTCAGAGCAATATCGGAGCGAAAAGGGCCGCTGCGTT TGATGTCTCCGCTGCCTGTTCGGGGTTTCTCTATGGACTCTCGTTGGCGGACAATGCCATTCGGTCTGGGGGGGCAAGTA AAGCTCTCATCATCGGCGCCGAGGTTCTGAGCCGAGTTATTGACTGGACCGACAGAAATACCTGCCTTCTTTTCGGTGAC GGTTCCGGGGCCGTAGTGGTTGAAGCATGCGAAAGTGAACAGGGAGTTCTTTCAACGCACCTGCATAGCGACGGTTCCTA TTGGGAACTCCTTTATCAGCCCGGTTGCGGCAATCGAAACCCCGCCGTTCAGAAGACCCTGGATGAGAGGAAGAACTTTC TCCGAATGCAGGGGAATGAGGTGTTCAAGCTTGCCGTGCGGGCTATGGAAGACGCTGCCCTTCAAGCACTGGAAAAGAAT GGCCTCACTCCCTCGGATATCAGTATTTTTATACCCCACCAGGCTAATCGTAGAATCATCGATGCCATCGGCAAGCGTCT TGGTTTAAGCGATGACAAAGTCTACGTTAATCTTGATCGATATGGAAACACCTCTTCTGCTTCAATCCCGCTTGCGCTTG ATGAAGCCAACCGTGGTGGGCGGATAAACGAGGGGGATATTGTCCTCTTTGATGCCTTCGGCGGTGGCCTCACGTGGGCC TCTGTTCTGCTGCGCTGGTAA
Upstream 100 bases:
>100_bases AGTGAATCAGCGGCTCGCAGAGAAGTTGGAGACTGAGTTCACCATGTATATGCAGCAGGGCAACGTCCGGGAGTCGGTTG CCGGCTGAGGGGGCATGGTA
Downstream 100 bases:
>100_bases TCTCTCTCCCAAAAGGAACTGCTATGAGTAGACGAGCATTCATATTCCCCGGCCAGGGTTCGCAATATCCCGGCATGGGA AAGGATCTTGCGGATAACTT
Product: 3-oxoacyl-[acyl-carrier-protein] synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MARARIIGTGSAVPEMIRTNFDLEKMVDTTDDWITTRTGIRERRIAAEGEYTSTFATRAAERALEMAGVTAEEIDLLIVA TVTPDFPFPSTACIVQSNIGAKRAAAFDVSAACSGFLYGLSLADNAIRSGGASKALIIGAEVLSRVIDWTDRNTCLLFGD GSGAVVVEACESEQGVLSTHLHSDGSYWELLYQPGCGNRNPAVQKTLDERKNFLRMQGNEVFKLAVRAMEDAALQALEKN GLTPSDISIFIPHQANRRIIDAIGKRLGLSDDKVYVNLDRYGNTSSASIPLALDEANRGGRINEGDIVLFDAFGGGLTWA SVLLRW
Sequences:
>Translated_326_residues MARARIIGTGSAVPEMIRTNFDLEKMVDTTDDWITTRTGIRERRIAAEGEYTSTFATRAAERALEMAGVTAEEIDLLIVA TVTPDFPFPSTACIVQSNIGAKRAAAFDVSAACSGFLYGLSLADNAIRSGGASKALIIGAEVLSRVIDWTDRNTCLLFGD GSGAVVVEACESEQGVLSTHLHSDGSYWELLYQPGCGNRNPAVQKTLDERKNFLRMQGNEVFKLAVRAMEDAALQALEKN GLTPSDISIFIPHQANRRIIDAIGKRLGLSDDKVYVNLDRYGNTSSASIPLALDEANRGGRINEGDIVLFDAFGGGLTWA SVLLRW >Mature_325_residues ARARIIGTGSAVPEMIRTNFDLEKMVDTTDDWITTRTGIRERRIAAEGEYTSTFATRAAERALEMAGVTAEEIDLLIVAT VTPDFPFPSTACIVQSNIGAKRAAAFDVSAACSGFLYGLSLADNAIRSGGASKALIIGAEVLSRVIDWTDRNTCLLFGDG SGAVVVEACESEQGVLSTHLHSDGSYWELLYQPGCGNRNPAVQKTLDERKNFLRMQGNEVFKLAVRAMEDAALQALEKNG LTPSDISIFIPHQANRRIIDAIGKRLGLSDDKVYVNLDRYGNTSSASIPLALDEANRGGRINEGDIVLFDAFGGGLTWAS VLLRW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=322, Percent_Identity=54.0372670807453, Blast_Score=343, Evalue=6e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35239; Mature: 35108
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARARIIGTGSAVPEMIRTNFDLEKMVDTTDDWITTRTGIRERRIAAEGEYTSTFATRAA CCCEEEEECCCHHHHHHHCCCCHHHHHCCCCCCEEHHCCCHHHHHCCCCCCHHHHHHHHH ERALEMAGVTAEEIDLLIVATVTPDFPFPSTACIVQSNIGAKRAAAFDVSAACSGFLYGL HHHHHHHCCCHHHEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHEEHHHHHHHHHHHH SLADNAIRSGGASKALIIGAEVLSRVIDWTDRNTCLLFGDGSGAVVVEACESEQGVLSTH HHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEE LHSDGSYWELLYQPGCGNRNPAVQKTLDERKNFLRMQGNEVFKLAVRAMEDAALQALEKN ECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GLTPSDISIFIPHQANRRIIDAIGKRLGLSDDKVYVNLDRYGNTSSASIPLALDEANRGG CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCC RINEGDIVLFDAFGGGLTWASVLLRW CCCCCCEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure ARARIIGTGSAVPEMIRTNFDLEKMVDTTDDWITTRTGIRERRIAAEGEYTSTFATRAA CCEEEEECCCHHHHHHHCCCCHHHHHCCCCCCEEHHCCCHHHHHCCCCCCHHHHHHHHH ERALEMAGVTAEEIDLLIVATVTPDFPFPSTACIVQSNIGAKRAAAFDVSAACSGFLYGL HHHHHHHCCCHHHEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHEEHHHHHHHHHHHH SLADNAIRSGGASKALIIGAEVLSRVIDWTDRNTCLLFGDGSGAVVVEACESEQGVLSTH HHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEE LHSDGSYWELLYQPGCGNRNPAVQKTLDERKNFLRMQGNEVFKLAVRAMEDAALQALEKN ECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GLTPSDISIFIPHQANRRIIDAIGKRLGLSDDKVYVNLDRYGNTSSASIPLALDEANRGG CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCC RINEGDIVLFDAFGGGLTWASVLLRW CCCCCCEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]