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The map label for this gene is fadF [H]

Identifier: 78222739

GI number: 78222739

Start: 1729576

End: 1731540

Strand: Direct

Name: fadF [H]

Synonym: Gmet_1527

Alternate gene names: 78222739

Gene position: 1729576-1731540 (Clockwise)

Preceding gene: 78222738

Following gene: 78222740

Centisome position: 43.27

GC content: 60.87

Gene sequence:

>1965_bases
ATGGAACGGATCCCCTACTGGAATATCAGCTATGGCCTCCTGATCGACCTCCTCTCCATCCCGGCAATGGCCGTGTTCGG
GTACGGGATCTACCGCCACTGGAAACGGATACGCCAGGGGAAGGCGAGCGTCAGGCAGGGGATTACCCTTGATGCGCTGA
AGCTGGGACCGGTTTATGTCTGGTCGTTTCTGACCAGGGGGATCGTGGGTACCCGTATCTACAAGAAACCGTTCACCGGC
ATTGCCCACGGCCTCCTGTTCTGGGGGATGGTCGTTTTGACCGTCGGGACCGTGCTGGTCTTTGCAAATGTGCTGTTCGG
CATCCCGGTCTTCACGGGGGAGTTCAATCGCCGGTTCATGGGGGGAGCCCTCGATGCCGCCGGGGTGGCAGCCCTGGCCG
GGGTGCTGTTCCTGCTGATACGCAGGCTTTCCCCACCCGAAAGGCTGACCTGCTTCAAGGCTAACTCGGGCTTCATCCTG
ATTGAGATCGGGATCATCGCCATCATCATTACCGGCTTCTTTATCGAGGGGGCACGAATCGCCCAGAACGGCATTGATCC
CGGCTCGTTCGTCGGCAACTGGCTCGGGTTCATGCTGCCAACCGGGGAAGGCGGACTCGAACTTCATCGGTACCTCTGGT
GGCTCCACGGTCTGCTCGTCCTCTCCCTGATCGCCTATATCCCGTTCTCCCCCCTGGCACACCTGGTGCTGGCTCCGGCC
AACGCCGGTCTCGATACCCCGATCCCCGGCCCTAAGATGGGGGTCATCGATTTCGAGGCGTTCGAGGGGGAAGGGGAGGA
GGCCCCGTCCCTGGGGGTGAGCAAGCTGGCCGACTTCAGCCGGAAGAACCTGCTGGACATCTCCACCTGCCTGAAGTGCG
GCCGGTGCCACGAGGTCTGCCCCGCGGCCCAGACCGGCAAACATCTCTCTCCCAAAGGGGTAATGGTCACCCTTGCCGAG
TATCTGCAAGAGGGGAAGATGCACGACGACTCGCTCCTGGAAACCATATCCACCGACGCAATTTACAGCTGCACCACGTG
CGCCGCCTGCATGGAAGCCTGCCCGGTATCGGTGAACCAGCCGAACGCCATCCTCGGCATGCGGCAGCATCTCCTCATGG
AGCGGTCGGAAATGCCCGACATCATGGGGCAGGCGCACCGCAGCCTGGAGGCCCGTCAACATCCCTTCATCGGTACCGGT
TTCGGCCCCAACGACTGGCGCAAGGGGCTGGAGGTTCCCATCTACGAAAGGGGCGCCACCGAATATCTCCTCTGGATCGG
CTGTTCGGTTGCCTATGAGGAGCGGACCCAGCATATCGGCCGGGCTATGGTCGCCATCCTGAAGAAGGCCGGGGTTTCAT
TCGGCATCCTGGAGGAAAACCGCTGCACCGGCGATCCGGCAAAGCAGATGGGTAACGAATTCCTGTTTTCGGAGATTGCC
GGCCGGAACATCGAGGAGTTTAACGAGCTAGGGGTGACCAAGGTCATCACCATGTGTCCCCACTGCTTTAATAGCTTCAC
CCGGCATTATCCCCTGCTGGGGGCGAAGTTCGAGGTAATCCCCCATGCGGTGCTCATCCGCAGTCTGATAGAGGCAGGGA
AGATAACGCTCGCCAACAGCGGCAGGAGCATCTGCTATCACGATCCCTGCTACCTGGGGCGGCACAACAACGTGCTGTCG
GAGCCGCGCAGCGTCGTTTCCTCAATCGGCCACCTGGTGGAGATGCCGAGGCATGGGAGCGAAAGCTTTTGCTGCGGCGC
CGGCGGCGGCAATTACTGGACCGAGGAAGAGGGGACCCGGATCAACCAGACCAGGGCCAAAGAGGCGCTGGACACGGGCG
CAAAAACCATCGCCACGTCCTGTCCGTTCTGCATGCTGATGCTGACGGACGGCCTGAAGAAATTCACGGAAGAACAGATG
GTACAGGATATCGCGGAACTGGTGTGCAGTCAGATGGAAGGGTGA

Upstream 100 bases:

>100_bases
AACGAGGCGAACATCTTCAAACGGGCCAGGTTCGGCATCGTCGGTGACTACAAAAAGGCGGTCCCGGCCCTGATCAACGC
CCTCAAGGAGAACGCCTGAC

Downstream 100 bases:

>100_bases
GAACGGTCATTTTTCATAAAGAGCGCTGAAAACAACTACAGGAGGAGTGTCATGGCAAAGGAAGAGGTTAAGCAGAAGAA
GACGAAAGAGAAGGAACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MERIPYWNISYGLLIDLLSIPAMAVFGYGIYRHWKRIRQGKASVRQGITLDALKLGPVYVWSFLTRGIVGTRIYKKPFTG
IAHGLLFWGMVVLTVGTVLVFANVLFGIPVFTGEFNRRFMGGALDAAGVAALAGVLFLLIRRLSPPERLTCFKANSGFIL
IEIGIIAIIITGFFIEGARIAQNGIDPGSFVGNWLGFMLPTGEGGLELHRYLWWLHGLLVLSLIAYIPFSPLAHLVLAPA
NAGLDTPIPGPKMGVIDFEAFEGEGEEAPSLGVSKLADFSRKNLLDISTCLKCGRCHEVCPAAQTGKHLSPKGVMVTLAE
YLQEGKMHDDSLLETISTDAIYSCTTCAACMEACPVSVNQPNAILGMRQHLLMERSEMPDIMGQAHRSLEARQHPFIGTG
FGPNDWRKGLEVPIYERGATEYLLWIGCSVAYEERTQHIGRAMVAILKKAGVSFGILEENRCTGDPAKQMGNEFLFSEIA
GRNIEEFNELGVTKVITMCPHCFNSFTRHYPLLGAKFEVIPHAVLIRSLIEAGKITLANSGRSICYHDPCYLGRHNNVLS
EPRSVVSSIGHLVEMPRHGSESFCCGAGGGNYWTEEEGTRINQTRAKEALDTGAKTIATSCPFCMLMLTDGLKKFTEEQM
VQDIAELVCSQMEG

Sequences:

>Translated_654_residues
MERIPYWNISYGLLIDLLSIPAMAVFGYGIYRHWKRIRQGKASVRQGITLDALKLGPVYVWSFLTRGIVGTRIYKKPFTG
IAHGLLFWGMVVLTVGTVLVFANVLFGIPVFTGEFNRRFMGGALDAAGVAALAGVLFLLIRRLSPPERLTCFKANSGFIL
IEIGIIAIIITGFFIEGARIAQNGIDPGSFVGNWLGFMLPTGEGGLELHRYLWWLHGLLVLSLIAYIPFSPLAHLVLAPA
NAGLDTPIPGPKMGVIDFEAFEGEGEEAPSLGVSKLADFSRKNLLDISTCLKCGRCHEVCPAAQTGKHLSPKGVMVTLAE
YLQEGKMHDDSLLETISTDAIYSCTTCAACMEACPVSVNQPNAILGMRQHLLMERSEMPDIMGQAHRSLEARQHPFIGTG
FGPNDWRKGLEVPIYERGATEYLLWIGCSVAYEERTQHIGRAMVAILKKAGVSFGILEENRCTGDPAKQMGNEFLFSEIA
GRNIEEFNELGVTKVITMCPHCFNSFTRHYPLLGAKFEVIPHAVLIRSLIEAGKITLANSGRSICYHDPCYLGRHNNVLS
EPRSVVSSIGHLVEMPRHGSESFCCGAGGGNYWTEEEGTRINQTRAKEALDTGAKTIATSCPFCMLMLTDGLKKFTEEQM
VQDIAELVCSQMEG
>Mature_654_residues
MERIPYWNISYGLLIDLLSIPAMAVFGYGIYRHWKRIRQGKASVRQGITLDALKLGPVYVWSFLTRGIVGTRIYKKPFTG
IAHGLLFWGMVVLTVGTVLVFANVLFGIPVFTGEFNRRFMGGALDAAGVAALAGVLFLLIRRLSPPERLTCFKANSGFIL
IEIGIIAIIITGFFIEGARIAQNGIDPGSFVGNWLGFMLPTGEGGLELHRYLWWLHGLLVLSLIAYIPFSPLAHLVLAPA
NAGLDTPIPGPKMGVIDFEAFEGEGEEAPSLGVSKLADFSRKNLLDISTCLKCGRCHEVCPAAQTGKHLSPKGVMVTLAE
YLQEGKMHDDSLLETISTDAIYSCTTCAACMEACPVSVNQPNAILGMRQHLLMERSEMPDIMGQAHRSLEARQHPFIGTG
FGPNDWRKGLEVPIYERGATEYLLWIGCSVAYEERTQHIGRAMVAILKKAGVSFGILEENRCTGDPAKQMGNEFLFSEIA
GRNIEEFNELGVTKVITMCPHCFNSFTRHYPLLGAKFEVIPHAVLIRSLIEAGKITLANSGRSICYHDPCYLGRHNNVLS
EPRSVVSSIGHLVEMPRHGSESFCCGAGGGNYWTEEEGTRINQTRAKEALDTGAKTIATSCPFCMLMLTDGLKKFTEEQM
VQDIAELVCSQMEG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 71762; Mature: 71762

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIPYWNISYGLLIDLLSIPAMAVFGYGIYRHWKRIRQGKASVRQGITLDALKLGPVYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHH
WSFLTRGIVGTRIYKKPFTGIAHGLLFWGMVVLTVGTVLVFANVLFGIPVFTGEFNRRFM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHH
GGALDAAGVAALAGVLFLLIRRLSPPERLTCFKANSGFILIEIGIIAIIITGFFIEGARI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCHHH
AQNGIDPGSFVGNWLGFMLPTGEGGLELHRYLWWLHGLLVLSLIAYIPFSPLAHLVLAPA
HHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
NAGLDTPIPGPKMGVIDFEAFEGEGEEAPSLGVSKLADFSRKNLLDISTCLKCGRCHEVC
CCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHC
PAAQTGKHLSPKGVMVTLAEYLQEGKMHDDSLLETISTDAIYSCTTCAACMEACPVSVNQ
CCHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PNAILGMRQHLLMERSEMPDIMGQAHRSLEARQHPFIGTGFGPNDWRKGLEVPIYERGAT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCCCCEECCCCC
EYLLWIGCSVAYEERTQHIGRAMVAILKKAGVSFGILEENRCTGDPAKQMGNEFLFSEIA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC
GRNIEEFNELGVTKVITMCPHCFNSFTRHYPLLGAKFEVIPHAVLIRSLIEAGKITLANS
CCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC
GRSICYHDPCYLGRHNNVLSEPRSVVSSIGHLVEMPRHGSESFCCGAGGGNYWTEEEGTR
CCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
INQTRAKEALDTGAKTIATSCPFCMLMLTDGLKKFTEEQMVQDIAELVCSQMEG
HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERIPYWNISYGLLIDLLSIPAMAVFGYGIYRHWKRIRQGKASVRQGITLDALKLGPVYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHH
WSFLTRGIVGTRIYKKPFTGIAHGLLFWGMVVLTVGTVLVFANVLFGIPVFTGEFNRRFM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHH
GGALDAAGVAALAGVLFLLIRRLSPPERLTCFKANSGFILIEIGIIAIIITGFFIEGARI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHCCHHH
AQNGIDPGSFVGNWLGFMLPTGEGGLELHRYLWWLHGLLVLSLIAYIPFSPLAHLVLAPA
HHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
NAGLDTPIPGPKMGVIDFEAFEGEGEEAPSLGVSKLADFSRKNLLDISTCLKCGRCHEVC
CCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHC
PAAQTGKHLSPKGVMVTLAEYLQEGKMHDDSLLETISTDAIYSCTTCAACMEACPVSVNQ
CCHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PNAILGMRQHLLMERSEMPDIMGQAHRSLEARQHPFIGTGFGPNDWRKGLEVPIYERGAT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHCCCCCCEECCCCC
EYLLWIGCSVAYEERTQHIGRAMVAILKKAGVSFGILEENRCTGDPAKQMGNEFLFSEIA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC
GRNIEEFNELGVTKVITMCPHCFNSFTRHYPLLGAKFEVIPHAVLIRSLIEAGKITLANS
CCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC
GRSICYHDPCYLGRHNNVLSEPRSVVSSIGHLVEMPRHGSESFCCGAGGGNYWTEEEGTR
CCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
INQTRAKEALDTGAKTIATSCPFCMLMLTDGLKKFTEEQMVQDIAELVCSQMEG
HHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]