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The map label for this gene is etfB [H]

Identifier: 78222737

GI number: 78222737

Start: 1727935

End: 1728690

Strand: Direct

Name: etfB [H]

Synonym: Gmet_1525

Alternate gene names: 78222737

Gene position: 1727935-1728690 (Clockwise)

Preceding gene: 78222736

Following gene: 78222738

Centisome position: 43.23

GC content: 58.47

Gene sequence:

>756_bases
ATGCAGATAGTCGTCTTGGCAAAGGTGGTGCCGGATTACGAAGTGCCGTCCGCGGACTTCGAACTGGTGGGGAACAGAGC
CCATCCCCGGTACACGAGGATGATCGGCCTGTACGATGAAAACGCCGTCGAACTCGGCGTGCAGCTGAAGGAAAAACTCG
GGGCCGACCTGACGGTTGTCTCCTATGGCCGGAACGACGATGTCCAATTTCTCAGAAAAGCGCTCGCCATGGGTGCAGAC
AAGGTGGTTCTGGTCGAAGGGGATTCGGACGATCCGTATGTGATTGCCGCCAACCTGAAAGATGCCATCGATCGGCAGGG
TACTGTGGACCTGATCCTTGCGGGTCGTCAGTCCTCGGACATGGACCGTGGCGTCGTCCCGGGGGTATTGGCCGGCATGC
TCGACCTCCCCTTTGTCCCCCAGGCCTGCAGCGTTGAAAGCGTCGACGGGGGGTGGAAAATTTCGCAGATAACCGAAACA
GGGAAGCGGTTGCTGAAGCTCTCCGGCAAGGGGGTACTCTCCATCACCAGCGTCCCGGAGAACGTTCCCCGGATTCCGGC
GGTCAAAGCGATCTTCGCGGCCAAGAAGAAGCCGGTGGAGAAGCTCCCTGAAATAGGGACCGGAAAGATGGCCGTCTCCG
AGCTGTCGGTGAGCATCCCCAAGGTCGAGTCCAACTGTGAACTTATACCGGCCGAGGATATGGACGATGCTGTTCGTGTT
CTCTTGAGAAGGCTCAAGGAGGAACGGTACCTATGA

Upstream 100 bases:

>100_bases
CTGTGGGGAATACTGCGGGACACGGAAGACCGGAAAGAGGGATTCACCGCCTTTGCCGAGAAGAGAGCGCCCCAGTATCG
GGGGAGATAGGAGCCGGATC

Downstream 100 bases:

>100_bases
AAACGCTGATCATCGAAACGGCCAATGCCAAGATCCTTGGGGAACTGGTAACCGTAAGCAGGCTGTTCGGCCAGGCCCCG
GATGTTGTCGTGCTGGGCAG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQIVVLAKVVPDYEVPSADFELVGNRAHPRYTRMIGLYDENAVELGVQLKEKLGADLTVVSYGRNDDVQFLRKALAMGAD
KVVLVEGDSDDPYVIAANLKDAIDRQGTVDLILAGRQSSDMDRGVVPGVLAGMLDLPFVPQACSVESVDGGWKISQITET
GKRLLKLSGKGVLSITSVPENVPRIPAVKAIFAAKKKPVEKLPEIGTGKMAVSELSVSIPKVESNCELIPAEDMDDAVRV
LLRRLKEERYL

Sequences:

>Translated_251_residues
MQIVVLAKVVPDYEVPSADFELVGNRAHPRYTRMIGLYDENAVELGVQLKEKLGADLTVVSYGRNDDVQFLRKALAMGAD
KVVLVEGDSDDPYVIAANLKDAIDRQGTVDLILAGRQSSDMDRGVVPGVLAGMLDLPFVPQACSVESVDGGWKISQITET
GKRLLKLSGKGVLSITSVPENVPRIPAVKAIFAAKKKPVEKLPEIGTGKMAVSELSVSIPKVESNCELIPAEDMDDAVRV
LLRRLKEERYL
>Mature_251_residues
MQIVVLAKVVPDYEVPSADFELVGNRAHPRYTRMIGLYDENAVELGVQLKEKLGADLTVVSYGRNDDVQFLRKALAMGAD
KVVLVEGDSDDPYVIAANLKDAIDRQGTVDLILAGRQSSDMDRGVVPGVLAGMLDLPFVPQACSVESVDGGWKISQITET
GKRLLKLSGKGVLSITSVPENVPRIPAVKAIFAAKKKPVEKLPEIGTGKMAVSELSVSIPKVESNCELIPAEDMDDAVRV
LLRRLKEERYL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25141345, Length=226, Percent_Identity=30.9734513274336, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321646, Length=221, Percent_Identity=30.316742081448, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27255; Mature: 27255

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVVLAKVVPDYEVPSADFELVGNRAHPRYTRMIGLYDENAVELGVQLKEKLGADLTVV
CEEEEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEE
SYGRNDDVQFLRKALAMGADKVVLVEGDSDDPYVIAANLKDAIDRQGTVDLILAGRQSSD
ECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCC
MDRGVVPGVLAGMLDLPFVPQACSVESVDGGWKISQITETGKRLLKLSGKGVLSITSVPE
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCC
NVPRIPAVKAIFAAKKKPVEKLPEIGTGKMAVSELSVSIPKVESNCELIPAEDMDDAVRV
CCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEHHHHHEECCCCCCCCCEECCCCHHHHHHH
LLRRLKEERYL
HHHHHHHHCCC
>Mature Secondary Structure
MQIVVLAKVVPDYEVPSADFELVGNRAHPRYTRMIGLYDENAVELGVQLKEKLGADLTVV
CEEEEEEEECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEE
SYGRNDDVQFLRKALAMGADKVVLVEGDSDDPYVIAANLKDAIDRQGTVDLILAGRQSSD
ECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCHHHHCCCCCEEEEEECCCCCC
MDRGVVPGVLAGMLDLPFVPQACSVESVDGGWKISQITETGKRLLKLSGKGVLSITSVPE
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCC
NVPRIPAVKAIFAAKKKPVEKLPEIGTGKMAVSELSVSIPKVESNCELIPAEDMDDAVRV
CCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEHHHHHEECCCCCCCCCEECCCCHHHHHHH
LLRRLKEERYL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA