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The map label for this gene is bbsG [H]

Identifier: 78222735

GI number: 78222735

Start: 1725877

End: 1727109

Strand: Direct

Name: bbsG [H]

Synonym: Gmet_1523

Alternate gene names: 78222735

Gene position: 1725877-1727109 (Clockwise)

Preceding gene: 78222734

Following gene: 78222736

Centisome position: 43.17

GC content: 60.99

Gene sequence:

>1233_bases
ATGGATTTCAGCATACCCGAAGAATACATGATGCTCAAAGAGTCGATGCGCGAGTTCGTCAAGCGCGAACTGATGCCGCT
GGAAAAGACGCTCTTGGAGCGGGAGCTCTCTCTCTGGACCGAGCCCGGCCATCTTATCCCCGACGAGGATCACAAGCGGC
TCATGCAGAAGACGAAGGAACTCGGATTCTGGGGGCTTGAGGTGGATGAGGAGTTCGGCGGCCAGGGGCTCGGGATGCTG
GCCAAGACCCTGGTTGTGGAGGAACTCTCCAAGAGCCTGGTCGGCTTCTCCAACCACGGCTTCACCCTCCCTCCGGATGC
CCCCAACCTCTATTACCTGCACGAGTGCTGCGGTCCCCGGCAGCGGGAAAAATACTTCGTCCCTTACTGCAACGGCGACG
TCGATTCCGCCATGGCCTGTACCGAGCCGGGCGCCGGTTCGGACGTGAGCGGCCTCAAGACCAAGGCGGTCAAGAAGGGG
GATAAATGGGTCATCAACGGGACCAAGTCGTTCATCAGCAAATGCGACTATGACAACGTCTTCTTCATCGTTATCGCGGT
TACCGACCCCTCGGCATCCACCAAAGACCGGTTTACCGCGTTTCTCATCGACCGTGAGCATCCGGGGGTGCGGATCGGCA
AGGAGATTCCGGTAATCGGCCCCATGCCGACCTGGGACCTGATCCTTGAGGATGTGGAAGTGGACGACGATGCCATCCTG
GGGGATGTGGGGAAGGCATTCATCCCGCTACAAAACCGGTTCGGCGTGCGCCGGATCGAGTTGGCCTCCAGCTGCACCGG
CATGGCGGAGCGGCTGATCCAGATGATGATCGACCAGGCCAATACCCGCATCACCTTCGGCCAGCCGCTGGCCGAACGGG
GGACGATCCAGAACTGGATCGCGGACTCCACCATGGAACTGGAACAGGTCCGCTGGCTGCTCTACTACGCGGCCTGGAAA
TCGGACCAAGGGCACAAGGACCTGCGGATCGAAGGGGCAAGCGTCAAGGTGGCGGCCACCGAAATGCTGACCCGGGTGGC
GGACCGGGCGATCCAGATCCATGGCGGTCTCGGGGTCTCGCATGAACTGGGGATCGAATACGTGGCCCGCCATGTGCGCC
TGTGGCGGATCGTGGAAGGCCCGTCAGAGGTCCACCGGTGGCTGGTTGCCCGGCAGCTGTTGAAGGAGAAGAAGCCGTAC
AATCCGTTTATCGTTGCCGCCGACGAGGAGTGA

Upstream 100 bases:

>100_bases
GAAGGGGATGCTGGACTATACGGATGAAGAAATCGCGATGCTCAGCGAGGAAAAGGTGCTTGTGTAGCTGCCTTTCAATA
CTACCACCAGGAGAAAGAGA

Downstream 100 bases:

>100_bases
CCCTACATGACGATGTACCGTCTAAACCATACCAGGAGGATGCAATGGGAGTTGATTTCGTAACAGAGGGGAATGTCGCC
TACATCACACTGAACCGTCC

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MDFSIPEEYMMLKESMREFVKRELMPLEKTLLERELSLWTEPGHLIPDEDHKRLMQKTKELGFWGLEVDEEFGGQGLGML
AKTLVVEELSKSLVGFSNHGFTLPPDAPNLYYLHECCGPRQREKYFVPYCNGDVDSAMACTEPGAGSDVSGLKTKAVKKG
DKWVINGTKSFISKCDYDNVFFIVIAVTDPSASTKDRFTAFLIDREHPGVRIGKEIPVIGPMPTWDLILEDVEVDDDAIL
GDVGKAFIPLQNRFGVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWIADSTMELEQVRWLLYYAAWK
SDQGHKDLRIEGASVKVAATEMLTRVADRAIQIHGGLGVSHELGIEYVARHVRLWRIVEGPSEVHRWLVARQLLKEKKPY
NPFIVAADEE

Sequences:

>Translated_410_residues
MDFSIPEEYMMLKESMREFVKRELMPLEKTLLERELSLWTEPGHLIPDEDHKRLMQKTKELGFWGLEVDEEFGGQGLGML
AKTLVVEELSKSLVGFSNHGFTLPPDAPNLYYLHECCGPRQREKYFVPYCNGDVDSAMACTEPGAGSDVSGLKTKAVKKG
DKWVINGTKSFISKCDYDNVFFIVIAVTDPSASTKDRFTAFLIDREHPGVRIGKEIPVIGPMPTWDLILEDVEVDDDAIL
GDVGKAFIPLQNRFGVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWIADSTMELEQVRWLLYYAAWK
SDQGHKDLRIEGASVKVAATEMLTRVADRAIQIHGGLGVSHELGIEYVARHVRLWRIVEGPSEVHRWLVARQLLKEKKPY
NPFIVAADEE
>Mature_410_residues
MDFSIPEEYMMLKESMREFVKRELMPLEKTLLERELSLWTEPGHLIPDEDHKRLMQKTKELGFWGLEVDEEFGGQGLGML
AKTLVVEELSKSLVGFSNHGFTLPPDAPNLYYLHECCGPRQREKYFVPYCNGDVDSAMACTEPGAGSDVSGLKTKAVKKG
DKWVINGTKSFISKCDYDNVFFIVIAVTDPSASTKDRFTAFLIDREHPGVRIGKEIPVIGPMPTWDLILEDVEVDDDAIL
GDVGKAFIPLQNRFGVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWIADSTMELEQVRWLLYYAAWK
SDQGHKDLRIEGASVKVAATEMLTRVADRAIQIHGGLGVSHELGIEYVARHVRLWRIVEGPSEVHRWLVARQLLKEKKPY
NPFIVAADEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=403, Percent_Identity=32.7543424317618, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI4557231, Length=402, Percent_Identity=28.6069651741293, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI187960098, Length=402, Percent_Identity=28.6069651741293, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI4501859, Length=395, Percent_Identity=29.3670886075949, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI7656849, Length=405, Percent_Identity=26.6666666666667, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI4557235, Length=353, Percent_Identity=31.1614730878187, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI76496475, Length=353, Percent_Identity=31.1614730878187, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI21361497, Length=381, Percent_Identity=30.9711286089239, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=29.9492385786802, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=30, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=30, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI226958414, Length=353, Percent_Identity=30.8781869688385, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI38505218, Length=401, Percent_Identity=27.6807980049875, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=27.7078085642317, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4503943, Length=393, Percent_Identity=21.882951653944, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI7669494, Length=393, Percent_Identity=22.64631043257, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=399, Percent_Identity=30.0751879699248, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1786223, Length=399, Percent_Identity=26.5664160401003, Blast_Score=122, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17534899, Length=348, Percent_Identity=31.8965517241379, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI71985184, Length=397, Percent_Identity=29.9748110831234, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17569725, Length=399, Percent_Identity=29.5739348370927, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17570075, Length=397, Percent_Identity=26.1964735516373, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17538396, Length=404, Percent_Identity=28.4653465346535, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17508101, Length=346, Percent_Identity=30.635838150289, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17506239, Length=402, Percent_Identity=29.1044776119403, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17562446, Length=401, Percent_Identity=29.6758104738155, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17533517, Length=402, Percent_Identity=26.865671641791, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71990804, Length=289, Percent_Identity=32.8719723183391, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71985192, Length=344, Percent_Identity=27.3255813953488, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17551932, Length=394, Percent_Identity=24.6192893401015, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=404, Percent_Identity=25, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=286, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=32.4786324786325, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24646207, Length=397, Percent_Identity=32.7455919395466, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI21356377, Length=402, Percent_Identity=31.3432835820896, Blast_Score=181, Evalue=7e-46,
Organism=Drosophila melanogaster, GI24660351, Length=400, Percent_Identity=28.5, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI21355753, Length=399, Percent_Identity=28.8220551378446, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI281363737, Length=347, Percent_Identity=30.5475504322767, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24666513, Length=394, Percent_Identity=28.9340101522843, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI19920834, Length=409, Percent_Identity=22.9828850855746, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 46361; Mature: 46361

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSIPEEYMMLKESMREFVKRELMPLEKTLLERELSLWTEPGHLIPDEDHKRLMQKTKE
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LGFWGLEVDEEFGGQGLGMLAKTLVVEELSKSLVGFSNHGFTLPPDAPNLYYLHECCGPR
CCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEHHHCCCC
QREKYFVPYCNGDVDSAMACTEPGAGSDVSGLKTKAVKKGDKWVINGTKSFISKCDYDNV
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHHHHHHCCCCCE
FFIVIAVTDPSASTKDRFTAFLIDREHPGVRIGKEIPVIGPMPTWDLILEDVEVDDDAIL
EEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCHHH
GDVGKAFIPLQNRFGVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWI
HHCCHHEECHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHH
ADSTMELEQVRWLLYYAAWKSDQGHKDLRIEGASVKVAATEMLTRVADRAIQIHGGLGVS
HCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHEEEECCCCCC
HELGIEYVARHVRLWRIVEGPSEVHRWLVARQLLKEKKPYNPFIVAADEE
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure
MDFSIPEEYMMLKESMREFVKRELMPLEKTLLERELSLWTEPGHLIPDEDHKRLMQKTKE
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LGFWGLEVDEEFGGQGLGMLAKTLVVEELSKSLVGFSNHGFTLPPDAPNLYYLHECCGPR
CCCCCEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEHHHCCCC
QREKYFVPYCNGDVDSAMACTEPGAGSDVSGLKTKAVKKGDKWVINGTKSFISKCDYDNV
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHHHHHHCCCCCE
FFIVIAVTDPSASTKDRFTAFLIDREHPGVRIGKEIPVIGPMPTWDLILEDVEVDDDAIL
EEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCHHH
GDVGKAFIPLQNRFGVRRIELASSCTGMAERLIQMMIDQANTRITFGQPLAERGTIQNWI
HHCCHHEECHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCHHHHH
ADSTMELEQVRWLLYYAAWKSDQGHKDLRIEGASVKVAATEMLTRVADRAIQIHGGLGVS
HCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEHHHHHHHHHHHHHHEEEECCCCCC
HELGIEYVARHVRLWRIVEGPSEVHRWLVARQLLKEKKPYNPFIVAADEE
HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]