| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222707
Identifier: 78222707
GI number: 78222707
Start: 1690548
End: 1691789
Strand: Direct
Name: 78222707
Synonym: Gmet_1495
Alternate gene names: NA
Gene position: 1690548-1691789 (Clockwise)
Preceding gene: 78222706
Following gene: 78222708
Centisome position: 42.29
GC content: 45.97
Gene sequence:
>1242_bases ATGATAGTGTCAAAGAACCTTTTGATACATACGTTTCGCCGGCCTGATGACGGCGCCTTTATCAGGGTTAAAAATCTCAA TACGGCTATTGCTGAAATAACTGCTGGACATTGCCACGAGGTAGTCCTTGTGTCAGTGCGTCACTTTCGCGAAATCTTTA AGAACGATAGAAATACGCGAATTTTCGAACGGAGACTTATTCTCCCTATCCTCTGGACAAACCGTCATCTTCTTGCACGC ACATGGAATGGTTTCAGTTCATGTATTGCAGGCTTGATTCTTGCCACCTTCTTGCGGCCTGACATTGTTGTCGGGGAAAC CAGCGCGTCGTGGAAACTGGCCAAGGCAACCAAGTTTTGGCGGCAGAGAGCCAAACTGATAATGGACCTCCACGGCGCAG GGCCTGAAGAGGTGTTATTCCATAATCCAACGTCAAAACTACATGAATCCGTTTACAGCTATGAGTCTAGGCTGGAGCAA GAAATAGCTCTTAATGCTGATTTTATCACTTGTCAGTCTGTCAACATGATTGAACATCTAATAATAAAGTATCCTGCGAC ACGTGCCCGGTTCCATCCGTTTCAATGCTCTGTGAGATCAGAGCTCTTCAGGATGGATCTTGATACGCGATCATATTACA GGCAAAAGCTTCAGTTGAATGACGGTGAAACCTTGTTCGTGTATTGTGGTTCCGTTCATAAGTGGCAGAACGTGCATTAC TCAGTAAACGTTTTTGCCGAGTATCTCAAGTGCTCCGCAACTGCTGCCAAATTGTTGATCATGTGTCCGAATCCGGATGC TGAGCTTTGCAATCATGCCTATTCGCTTGGTTTGTCCGATGATGATTTCAGAATAATTGCAGTCCCCCATGAAGAAGTGC CTGCTTATCTTAACGCTGCAGACATCGGATTTTTGATCCGGGATGATGGCGTCGTAAATCGAGTCGCTTCGCCGACAAAA CTCGGAGAATATCTTGCCTGTGGCCTTTCGGTTATTGTTGGCAATGTTGCAAATTCATGGTCGTCCGCCAGGCTTGATTC ATCATGCTTCTGCTTTGTTGATCTTGACAATGCGGCTGGAGCAGCAAATACAATCCTTCGATTTGTGGATTCAAAAAGCG ATGACCCTATGTCAGTCAAGCAAAGTGCCACCTCACTCGCCGGACTTTCATTGTCCACCACGACAGAGACTGAGCGGTTG AAAATGTTCATGAAGCACAGTGTTATGGAGCAGATTTCTTGA
Upstream 100 bases:
>100_bases GTTCCATACCTGTTTTATTCAATGAATCTGGTCCCGTTCGGCATTTTCGTCGGGCTGTTCATAAGTGAGTACACAGATAT GGCAAACAGCAGAATGAGGA
Downstream 100 bases:
>100_bases GAATAGCCCTTGTAACAAATACATTTCTACCTTTAACGGGTGGAGGAGAATTCGTTGTCCATCATCTTGGCAACCAATGG AGCATGCAGGGACATGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MIVSKNLLIHTFRRPDDGAFIRVKNLNTAIAEITAGHCHEVVLVSVRHFREIFKNDRNTRIFERRLILPILWTNRHLLAR TWNGFSSCIAGLILATFLRPDIVVGETSASWKLAKATKFWRQRAKLIMDLHGAGPEEVLFHNPTSKLHESVYSYESRLEQ EIALNADFITCQSVNMIEHLIIKYPATRARFHPFQCSVRSELFRMDLDTRSYYRQKLQLNDGETLFVYCGSVHKWQNVHY SVNVFAEYLKCSATAAKLLIMCPNPDAELCNHAYSLGLSDDDFRIIAVPHEEVPAYLNAADIGFLIRDDGVVNRVASPTK LGEYLACGLSVIVGNVANSWSSARLDSSCFCFVDLDNAAGAANTILRFVDSKSDDPMSVKQSATSLAGLSLSTTTETERL KMFMKHSVMEQIS
Sequences:
>Translated_413_residues MIVSKNLLIHTFRRPDDGAFIRVKNLNTAIAEITAGHCHEVVLVSVRHFREIFKNDRNTRIFERRLILPILWTNRHLLAR TWNGFSSCIAGLILATFLRPDIVVGETSASWKLAKATKFWRQRAKLIMDLHGAGPEEVLFHNPTSKLHESVYSYESRLEQ EIALNADFITCQSVNMIEHLIIKYPATRARFHPFQCSVRSELFRMDLDTRSYYRQKLQLNDGETLFVYCGSVHKWQNVHY SVNVFAEYLKCSATAAKLLIMCPNPDAELCNHAYSLGLSDDDFRIIAVPHEEVPAYLNAADIGFLIRDDGVVNRVASPTK LGEYLACGLSVIVGNVANSWSSARLDSSCFCFVDLDNAAGAANTILRFVDSKSDDPMSVKQSATSLAGLSLSTTTETERL KMFMKHSVMEQIS >Mature_413_residues MIVSKNLLIHTFRRPDDGAFIRVKNLNTAIAEITAGHCHEVVLVSVRHFREIFKNDRNTRIFERRLILPILWTNRHLLAR TWNGFSSCIAGLILATFLRPDIVVGETSASWKLAKATKFWRQRAKLIMDLHGAGPEEVLFHNPTSKLHESVYSYESRLEQ EIALNADFITCQSVNMIEHLIIKYPATRARFHPFQCSVRSELFRMDLDTRSYYRQKLQLNDGETLFVYCGSVHKWQNVHY SVNVFAEYLKCSATAAKLLIMCPNPDAELCNHAYSLGLSDDDFRIIAVPHEEVPAYLNAADIGFLIRDDGVVNRVASPTK LGEYLACGLSVIVGNVANSWSSARLDSSCFCFVDLDNAAGAANTILRFVDSKSDDPMSVKQSATSLAGLSLSTTTETERL KMFMKHSVMEQIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46586; Mature: 46586
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSKNLLIHTFRRPDDGAFIRVKNLNTAIAEITAGHCHEVVLVSVRHFREIFKNDRNTR CEECCCEEEEEECCCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCE IFERRLILPILWTNRHLLARTWNGFSSCIAGLILATFLRPDIVVGETSASWKLAKATKFW EEHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH RQRAKLIMDLHGAGPEEVLFHNPTSKLHESVYSYESRLEQEIALNADFITCQSVNMIEHL HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH IIKYPATRARFHPFQCSVRSELFRMDLDTRSYYRQKLQLNDGETLFVYCGSVHKWQNVHY HHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE SVNVFAEYLKCSATAAKLLIMCPNPDAELCNHAYSLGLSDDDFRIIAVPHEEVPAYLNAA EHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCHH DIGFLIRDDGVVNRVASPTKLGEYLACGLSVIVGNVANSWSSARLDSSCFCFVDLDNAAG HEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC AANTILRFVDSKSDDPMSVKQSATSLAGLSLSTTTETERLKMFMKHSVMEQIS HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIVSKNLLIHTFRRPDDGAFIRVKNLNTAIAEITAGHCHEVVLVSVRHFREIFKNDRNTR CEECCCEEEEEECCCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCE IFERRLILPILWTNRHLLARTWNGFSSCIAGLILATFLRPDIVVGETSASWKLAKATKFW EEHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH RQRAKLIMDLHGAGPEEVLFHNPTSKLHESVYSYESRLEQEIALNADFITCQSVNMIEHL HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH IIKYPATRARFHPFQCSVRSELFRMDLDTRSYYRQKLQLNDGETLFVYCGSVHKWQNVHY HHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEE SVNVFAEYLKCSATAAKLLIMCPNPDAELCNHAYSLGLSDDDFRIIAVPHEEVPAYLNAA EHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCHHCCCCCCHH DIGFLIRDDGVVNRVASPTKLGEYLACGLSVIVGNVANSWSSARLDSSCFCFVDLDNAAG HEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC AANTILRFVDSKSDDPMSVKQSATSLAGLSLSTTTETERLKMFMKHSVMEQIS HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA