| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222691
Identifier: 78222691
GI number: 78222691
Start: 1668981
End: 1671152
Strand: Reverse
Name: 78222691
Synonym: Gmet_1479
Alternate gene names: NA
Gene position: 1671152-1668981 (Counterclockwise)
Preceding gene: 78222692
Following gene: 78222684
Centisome position: 41.81
GC content: 63.77
Gene sequence:
>2172_bases TTGACAGTTTCCCCGTTTCCTCGCATCGAACGGGTGGCAGTGCTCCTGTCACCCGTTCTCTTCATCATGGCCGGCTGGTT GGTTTTCTGCTCAGCCGCCGACGCCCGCCCCCTTTCCGTCGGCATTATCGCCCCACCGTCGCTTCTTGCCGCCCCGGTGG CCAGAAATACCGTCGATGACACGCTTCGTCTCATGAAAAAAGGGTTCCCCGACGCCCGGATCACCCTGAACGATTCCAAG GCCTCCATCCGCCTGGTTCTCCCTACCCTTCCCCAAAGCACCACGGAATCCCTTCGAGACAGCACAGCCCAATCATACAC CTGGAACTCCCGCCACGTCAGAGACGCCACGGTACTGACTCTCTCGGCCACCACGGCAGCGGGGATCAGCAACGGCCTCT ACGGTCTCCTCCAGGAGCGGCTCGGCTACCGCTTCATCCACCCCCGGCAGACCATCGTTCCCCGCCACGCCACGTGGCCA CTCACCAGCCGCTTTCGCTGGAGCGCCACCCCCCGCTTCGCCAGCCGCGGGTTCCACCTCCATACCCTTCACCCCACCGA ACTGGCGACCCAACTCCACGACCCCTCGTATCCCGGCGCCCTCGCCGATGTGAAGGAATATATCGACTGGCTGGCGCGCA ACGGCCAGAACACGATGCAGTTTTTCCTCCTGCGGGGTGTGGATCGCGACCGCTGGCCTCCCCACGCCCGGGCTTTCGTG GAGTATGCCCACCAGCGGGGGATCGCCGTGGGGGTGGAGATATCCCTCTCCATGCTCCAGCAGCAGGCATTTCAGACGGT GAAGCTCCTGAGGCCTTTTTACCGGCGCCAGATCGACCGGAACCTTGACTGGCTCTTCCAGGTCCCCTGGGACTTCGTCA CTCTCGAAAGCGCCACGGGCGAGCATCTGCCCCGCATCGACCGGCTCGCTCCCTCCCTGCGCAACCATGCGGCGGAGCAG GTGATCAAGCGCCATGGCGCCCGCTTCTTCCACGCCACCCACGTTATCCGTCCCGGCGCCCAAGAGGCGAACGGCACCCC GCCGCCGGTGGACGACCTGCCGCGAGACTGCGGCATCCTCGTGCACACGGTCATGTGCTACTCCGCATCGGAGGAAAAAG CCCCGGTCTACGGCAACACTAATCAGCGTTTCATGCTGAAGCTGGCCGAACAGGAATCGCGGCGGCGGGAGACCTGGTAC TGGCCCGAATCGTCCTACTGGGTCGCCTTCGACAATTCCGTCCCCCAGATGCTCCTCCCCTATCTCTCGGCCCGTCACCA CGACATGATGACCATGGAGCGCCTTGGCGTGACCGGACACCTTACCTTCACCTCGGGCTGGGAGTGGGGCAACTGGCTCA CCGACTGGAGCATCGCCCGCTGGTCGTGGCGGCATGCTTCCAGCGGCCGCGACGAGGCGACGTCCCCCCTCTCCGTGCTC GGCGATCTCTTTCCCGACCGCCGTCTCCGGCAGCTCTGGCAAGAGGCCCTCACCCTCCAGGAGCACTACCTGAAGGAGCG GGAGCTTCTCCGCTATACCGCAGCCCTGGCCCCCTTTTCCGAGATGCCGTGGCCCCTGAACAAGCCGTTCCAGCCGGAGC CGCCGTTCCGGTACGGAGAACTCATCGCATCAAAGCGCTCAACAGCGTTACCTGCGGCAACGGTGGCCGATCTGGAGGAA TTCAGCCGGCAGATGGAACGGCTTGCTCTGGAAATCAGGAGGGAATCGAAACGATTCGTGACAACGGTTCCGAATGGTAA GGAAGGGTTACGGGGAATTTCGCGGGAACTGGAGCGGAGTCTCACGGCCACGGCCCTGCGGGCCGGTCATCGGGCACTCA CCATCCGTGCAATCATGGCCCAACGACAGCTGCCGCGCGAGAAGCGGCCCGGAGCCGGGGCGCTCCGGCTTCTTGCCAGG GCGGCGGCGGTTCGTGAACGGGCACTGGTTCTCGTAAAGGAACAGGAGGCGGGATATCGTTACCCGGTGAGCCTTGTGGC GCGTAAGCGGACGGACCTGACCGCCTACGGATTCGGCTATCTCTATCCGGTAAGCGAGCTTCATTTCTGGAAGCGGGAAG AGGAACAGGCGCGCCGGCTGCGCTTCGACGCCCTGTTCATGAATCTGTGGGATTTCAGGAGAACCTTGGGGTTGGAGAGT TTGCTCTTCTGA
Upstream 100 bases:
>100_bases CCTTTGCCGAGCAGGGGGCGTCCCTCACCGGAGATGCCTACAGCACCATTCTGCGGCAGCCGGGCAAGGCTGCCAACTTC TAGTCAACCGGTCTCCTTCA
Downstream 100 bases:
>100_bases AGGCGGAAGCCGGGAAGGTATCGCCTTGGTCAATGGCCGGCGAATTCCGTCAGGCTCATAATCATCTCTCCGTCAACCGT CGGATCGATGTGGGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTVSPFPRIERVAVLLSPVLFIMAGWLVFCSAADARPLSVGIIAPPSLLAAPVARNTVDDTLRLMKKGFPDARITLNDSK ASIRLVLPTLPQSTTESLRDSTAQSYTWNSRHVRDATVLTLSATTAAGISNGLYGLLQERLGYRFIHPRQTIVPRHATWP LTSRFRWSATPRFASRGFHLHTLHPTELATQLHDPSYPGALADVKEYIDWLARNGQNTMQFFLLRGVDRDRWPPHARAFV EYAHQRGIAVGVEISLSMLQQQAFQTVKLLRPFYRRQIDRNLDWLFQVPWDFVTLESATGEHLPRIDRLAPSLRNHAAEQ VIKRHGARFFHATHVIRPGAQEANGTPPPVDDLPRDCGILVHTVMCYSASEEKAPVYGNTNQRFMLKLAEQESRRRETWY WPESSYWVAFDNSVPQMLLPYLSARHHDMMTMERLGVTGHLTFTSGWEWGNWLTDWSIARWSWRHASSGRDEATSPLSVL GDLFPDRRLRQLWQEALTLQEHYLKERELLRYTAALAPFSEMPWPLNKPFQPEPPFRYGELIASKRSTALPAATVADLEE FSRQMERLALEIRRESKRFVTTVPNGKEGLRGISRELERSLTATALRAGHRALTIRAIMAQRQLPREKRPGAGALRLLAR AAAVRERALVLVKEQEAGYRYPVSLVARKRTDLTAYGFGYLYPVSELHFWKREEEQARRLRFDALFMNLWDFRRTLGLES LLF
Sequences:
>Translated_723_residues MTVSPFPRIERVAVLLSPVLFIMAGWLVFCSAADARPLSVGIIAPPSLLAAPVARNTVDDTLRLMKKGFPDARITLNDSK ASIRLVLPTLPQSTTESLRDSTAQSYTWNSRHVRDATVLTLSATTAAGISNGLYGLLQERLGYRFIHPRQTIVPRHATWP LTSRFRWSATPRFASRGFHLHTLHPTELATQLHDPSYPGALADVKEYIDWLARNGQNTMQFFLLRGVDRDRWPPHARAFV EYAHQRGIAVGVEISLSMLQQQAFQTVKLLRPFYRRQIDRNLDWLFQVPWDFVTLESATGEHLPRIDRLAPSLRNHAAEQ VIKRHGARFFHATHVIRPGAQEANGTPPPVDDLPRDCGILVHTVMCYSASEEKAPVYGNTNQRFMLKLAEQESRRRETWY WPESSYWVAFDNSVPQMLLPYLSARHHDMMTMERLGVTGHLTFTSGWEWGNWLTDWSIARWSWRHASSGRDEATSPLSVL GDLFPDRRLRQLWQEALTLQEHYLKERELLRYTAALAPFSEMPWPLNKPFQPEPPFRYGELIASKRSTALPAATVADLEE FSRQMERLALEIRRESKRFVTTVPNGKEGLRGISRELERSLTATALRAGHRALTIRAIMAQRQLPREKRPGAGALRLLAR AAAVRERALVLVKEQEAGYRYPVSLVARKRTDLTAYGFGYLYPVSELHFWKREEEQARRLRFDALFMNLWDFRRTLGLES LLF >Mature_722_residues TVSPFPRIERVAVLLSPVLFIMAGWLVFCSAADARPLSVGIIAPPSLLAAPVARNTVDDTLRLMKKGFPDARITLNDSKA SIRLVLPTLPQSTTESLRDSTAQSYTWNSRHVRDATVLTLSATTAAGISNGLYGLLQERLGYRFIHPRQTIVPRHATWPL TSRFRWSATPRFASRGFHLHTLHPTELATQLHDPSYPGALADVKEYIDWLARNGQNTMQFFLLRGVDRDRWPPHARAFVE YAHQRGIAVGVEISLSMLQQQAFQTVKLLRPFYRRQIDRNLDWLFQVPWDFVTLESATGEHLPRIDRLAPSLRNHAAEQV IKRHGARFFHATHVIRPGAQEANGTPPPVDDLPRDCGILVHTVMCYSASEEKAPVYGNTNQRFMLKLAEQESRRRETWYW PESSYWVAFDNSVPQMLLPYLSARHHDMMTMERLGVTGHLTFTSGWEWGNWLTDWSIARWSWRHASSGRDEATSPLSVLG DLFPDRRLRQLWQEALTLQEHYLKERELLRYTAALAPFSEMPWPLNKPFQPEPPFRYGELIASKRSTALPAATVADLEEF SRQMERLALEIRRESKRFVTTVPNGKEGLRGISRELERSLTATALRAGHRALTIRAIMAQRQLPREKRPGAGALRLLARA AAVRERALVLVKEQEAGYRYPVSLVARKRTDLTAYGFGYLYPVSELHFWKREEEQARRLRFDALFMNLWDFRRTLGLESL LF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82911; Mature: 82780
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSPFPRIERVAVLLSPVLFIMAGWLVFCSAADARPLSVGIIAPPSLLAAPVARNTVDD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHH TLRLMKKGFPDARITLNDSKASIRLVLPTLPQSTTESLRDSTAQSYTWNSRHVRDATVLT HHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LSATTAAGISNGLYGLLQERLGYRFIHPRQTIVPRHATWPLTSRFRWSATPRFASRGFHL EECHHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCCCCCCCCCCEECCCCCHHHHCCCEE HTLHPTELATQLHDPSYPGALADVKEYIDWLARNGQNTMQFFLLRGVDRDRWPPHARAFV EECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHH EYAHQRGIAVGVEISLSMLQQQAFQTVKLLRPFYRRQIDRNLDWLFQVPWDFVTLESATG HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC EHLPRIDRLAPSLRNHAAEQVIKRHGARFFHATHVIRPGAQEANGTPPPVDDLPRDCGIL CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHH VHTVMCYSASEEKAPVYGNTNQRFMLKLAEQESRRRETWYWPESSYWVAFDNSVPQMLLP HHHHHHHCCCCCCCCCCCCCCHHHHHEEHHHHHHCCCCEECCCCCEEEEECCCCHHHHHH YLSARHHDMMTMERLGVTGHLTFTSGWEWGNWLTDWSIARWSWRHASSGRDEATSPLSVL HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCCCCHHHHH GDLFPDRRLRQLWQEALTLQEHYLKERELLRYTAALAPFSEMPWPLNKPFQPEPPFRYGE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHH LIASKRSTALPAATVADLEEFSRQMERLALEIRRESKRFVTTVPNGKEGLRGISRELERS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH LTATALRAGHRALTIRAIMAQRQLPREKRPGAGALRLLARAAAVRERALVLVKEQEAGYR HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCC YPVSLVARKRTDLTAYGFGYLYPVSELHFWKREEEQARRLRFDALFMNLWDFRRTLGLES CCHHHHHHHCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LLF HCC >Mature Secondary Structure TVSPFPRIERVAVLLSPVLFIMAGWLVFCSAADARPLSVGIIAPPSLLAAPVARNTVDD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHH TLRLMKKGFPDARITLNDSKASIRLVLPTLPQSTTESLRDSTAQSYTWNSRHVRDATVLT HHHHHHCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE LSATTAAGISNGLYGLLQERLGYRFIHPRQTIVPRHATWPLTSRFRWSATPRFASRGFHL EECHHHHHHHHHHHHHHHHHCCCEEECCCHHCCCCCCCCCCCCCEECCCCCHHHHCCCEE HTLHPTELATQLHDPSYPGALADVKEYIDWLARNGQNTMQFFLLRGVDRDRWPPHARAFV EECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHH EYAHQRGIAVGVEISLSMLQQQAFQTVKLLRPFYRRQIDRNLDWLFQVPWDFVTLESATG HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC EHLPRIDRLAPSLRNHAAEQVIKRHGARFFHATHVIRPGAQEANGTPPPVDDLPRDCGIL CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHH VHTVMCYSASEEKAPVYGNTNQRFMLKLAEQESRRRETWYWPESSYWVAFDNSVPQMLLP HHHHHHHCCCCCCCCCCCCCCHHHHHEEHHHHHHCCCCEECCCCCEEEEECCCCHHHHHH YLSARHHDMMTMERLGVTGHLTFTSGWEWGNWLTDWSIARWSWRHASSGRDEATSPLSVL HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHEECCCCCCCCCCCCCHHHHH GDLFPDRRLRQLWQEALTLQEHYLKERELLRYTAALAPFSEMPWPLNKPFQPEPPFRYGE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHH LIASKRSTALPAATVADLEEFSRQMERLALEIRRESKRFVTTVPNGKEGLRGISRELERS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH LTATALRAGHRALTIRAIMAQRQLPREKRPGAGALRLLARAAAVRERALVLVKEQEAGYR HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCC YPVSLVARKRTDLTAYGFGYLYPVSELHFWKREEEQARRLRFDALFMNLWDFRRTLGLES CCHHHHHHHCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LLF HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA