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The map label for this gene is 78222306

Identifier: 78222306

GI number: 78222306

Start: 1212322

End: 1212753

Strand: Reverse

Name: 78222306

Synonym: Gmet_1088

Alternate gene names: NA

Gene position: 1212753-1212322 (Counterclockwise)

Preceding gene: 78222307

Following gene: 78222305

Centisome position: 30.34

GC content: 60.88

Gene sequence:

>432_bases
ATGCATGACAGATCCATTGTGACGAAACTGAAGGGTTCGGGACACAGGAGCATCATCGTTGTCGCTATCCTTGCCGGCTG
TCTGGCAGCCGCCGGCTGCAAGCAGCAGGAAAAGCCCGTCCAGGCCCCGGCCGAAAAACCGGCCACGGGAGCGGTCCCTC
AGACAACCATGGGAGGCCCCATGAGTGACCAGCAGACGCAGGCCATGGGGAAAGCCATCTTCAAGAAACAGTGCGCCGGT
TGCCACGGCGAAGAGGGTAAAGGGATGAGCGCCCCCTCTCTCCAGAAGGCCGACTTCAAGTACGGTCGCACTCCCGAGGC
GATCAAGGAGACCATCACCAAGGGACGCCCCGGCGGCATGCCCGCTTTCGGCAACCTCCAGGAAATCGAGGTGGAAACCC
TCGTTGCCTATGTCCTGGGCCTTAAACGGTAA

Upstream 100 bases:

>100_bases
CGGAGAATCCCCTGAGCTGGAGAGACGTGTGCCTTGACATACAGAATCGCTTCATTATACTCGCCTAAAACATCCCCATC
AAAAGAGCGGAGGGAGCACC

Downstream 100 bases:

>100_bases
CCAGTTCACGACAAGTTTCACATAAGAGTTGACACACACAAACAAATCGGTTACACAATAGCAACACTTTCATCAGCGAA
TCTGGCTGAAGATAGCGATA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C Oxidase Cbb3-Type Subunit III

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MHDRSIVTKLKGSGHRSIIVVAILAGCLAAAGCKQQEKPVQAPAEKPATGAVPQTTMGGPMSDQQTQAMGKAIFKKQCAG
CHGEEGKGMSAPSLQKADFKYGRTPEAIKETITKGRPGGMPAFGNLQEIEVETLVAYVLGLKR

Sequences:

>Translated_143_residues
MHDRSIVTKLKGSGHRSIIVVAILAGCLAAAGCKQQEKPVQAPAEKPATGAVPQTTMGGPMSDQQTQAMGKAIFKKQCAG
CHGEEGKGMSAPSLQKADFKYGRTPEAIKETITKGRPGGMPAFGNLQEIEVETLVAYVLGLKR
>Mature_143_residues
MHDRSIVTKLKGSGHRSIIVVAILAGCLAAAGCKQQEKPVQAPAEKPATGAVPQTTMGGPMSDQQTQAMGKAIFKKQCAG
CHGEEGKGMSAPSLQKADFKYGRTPEAIKETITKGRPGGMPAFGNLQEIEVETLVAYVLGLKR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15021; Mature: 15021

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDRSIVTKLKGSGHRSIIVVAILAGCLAAAGCKQQEKPVQAPAEKPATGAVPQTTMGGP
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MSDQQTQAMGKAIFKKQCAGCHGEEGKGMSAPSLQKADFKYGRTPEAIKETITKGRPGGM
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PAFGNLQEIEVETLVAYVLGLKR
CCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHDRSIVTKLKGSGHRSIIVVAILAGCLAAAGCKQQEKPVQAPAEKPATGAVPQTTMGGP
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MSDQQTQAMGKAIFKKQCAGCHGEEGKGMSAPSLQKADFKYGRTPEAIKETITKGRPGGM
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PAFGNLQEIEVETLVAYVLGLKR
CCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA