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The map label for this gene is cheD1

Identifier: 78222294

GI number: 78222294

Start: 1197749

End: 1198285

Strand: Reverse

Name: cheD1

Synonym: Gmet_1076

Alternate gene names: 78222294

Gene position: 1198285-1197749 (Counterclockwise)

Preceding gene: 78222295

Following gene: 78222293

Centisome position: 29.98

GC content: 61.82

Gene sequence:

>537_bases
ATGCACACCGGCAGATACTTCGCGAAAAACTCCTATTACGACCGGACCTTCAACAAGCAGGCAGTGAAGATCCTTCCGGG
CGAATACCACGCCACCGACAGCGACACCATGATCGTCACGGTACTCGGCTCCTGTGTCTCGGTCTGCATCCGCGACCGGC
TGAGCGGCATCGGCGGCATGAACCACTACATGCTTCCGGGCGAGGCAGGCACCGACGAATCCCCTTCACCCCGCTACGGC
ACCCACGCCATGGAGCTGCTGATCGATCACCTGATCCAGCTGGGAGGGAGGCTCCCCTACCTGGAGGCGAAGGTCTTCGG
CGCCGGCAGGGTCATCAACGGAGTAACCGACGTGGGGGAGCGCAACGCCGAATTCGCCCTCCGTTACCTGGAAGAGCGCG
AGATACCGGTAACGGCGGTGGATGTGGGGGACATCTACCCGCGCAAGGTCTACTTCGCCCCGGCAACCGGCCGTGCCTTT
GTCAGGCAGATCAGGACCGGCAGCATCGACTCGCTGTTTATCGGAGAATCGTCATGA

Upstream 100 bases:

>100_bases
CCGACCTCTTCCAGGTCCGCGGCAAGACGGTCTACGCCGTTCGGGATGGCGCCCCCCTCCCCACCGGCCTCCGGTCGTAA
CCGGCACCAGGGAAAAGTTC

Downstream 100 bases:

>100_bases
GCACGCAGCCCATCAAAGTTCTCATCGTCGATGACTCGGCCCTCATCCGAAGCCTGCTGACGGACATCATCAACAGCCAG
ACCGATATGGAGGTGGTGGG

Product: CheD, stimulates methylation of MCP proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MHTGRYFAKNSYYDRTFNKQAVKILPGEYHATDSDTMIVTVLGSCVSVCIRDRLSGIGGMNHYMLPGEAGTDESPSPRYG
THAMELLIDHLIQLGGRLPYLEAKVFGAGRVINGVTDVGERNAEFALRYLEEREIPVTAVDVGDIYPRKVYFAPATGRAF
VRQIRTGSIDSLFIGESS

Sequences:

>Translated_178_residues
MHTGRYFAKNSYYDRTFNKQAVKILPGEYHATDSDTMIVTVLGSCVSVCIRDRLSGIGGMNHYMLPGEAGTDESPSPRYG
THAMELLIDHLIQLGGRLPYLEAKVFGAGRVINGVTDVGERNAEFALRYLEEREIPVTAVDVGDIYPRKVYFAPATGRAF
VRQIRTGSIDSLFIGESS
>Mature_178_residues
MHTGRYFAKNSYYDRTFNKQAVKILPGEYHATDSDTMIVTVLGSCVSVCIRDRLSGIGGMNHYMLPGEAGTDESPSPRYG
THAMELLIDHLIQLGGRLPYLEAKVFGAGRVINGVTDVGERNAEFALRYLEEREIPVTAVDVGDIYPRKVYFAPATGRAF
VRQIRTGSIDSLFIGESS

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED1_GEOMG (Q39WQ8)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_384041.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q39WQ8
- SMR:   Q39WQ8
- STRING:   Q39WQ8
- GeneID:   3741283
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_1076
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   PRKVYFF
- BioCyc:   GMET269799:GMET_1076-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 19654; Mature: 19654

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTGRYFAKNSYYDRTFNKQAVKILPGEYHATDSDTMIVTVLGSCVSVCIRDRLSGIGGM
CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
NHYMLPGEAGTDESPSPRYGTHAMELLIDHLIQLGGRLPYLEAKVFGAGRVINGVTDVGE
CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHCCC
RNAEFALRYLEEREIPVTAVDVGDIYPRKVYFAPATGRAFVRQIRTGSIDSLFIGESS
CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCC
>Mature Secondary Structure
MHTGRYFAKNSYYDRTFNKQAVKILPGEYHATDSDTMIVTVLGSCVSVCIRDRLSGIGGM
CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
NHYMLPGEAGTDESPSPRYGTHAMELLIDHLIQLGGRLPYLEAKVFGAGRVINGVTDVGE
CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHCCC
RNAEFALRYLEEREIPVTAVDVGDIYPRKVYFAPATGRAFVRQIRTGSIDSLFIGESS
CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA