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The map label for this gene is 78222282

Identifier: 78222282

GI number: 78222282

Start: 1184266

End: 1186434

Strand: Direct

Name: 78222282

Synonym: Gmet_1064

Alternate gene names: NA

Gene position: 1184266-1186434 (Clockwise)

Preceding gene: 78222281

Following gene: 78222283

Centisome position: 29.63

GC content: 57.81

Gene sequence:

>2169_bases
ATGAGAGAACGACCGGTGGCCCATCTGGCGGAAGATGGGCGGGTTCATGGGCTTGAGGAGCATCTGTGCGGGACGGCGTA
TTTTGCCGCAGCTTTTGCCGGAGAGTTTGGGTGTGCAGGGTGGGGGAGGCTTGCCGGAATCTGGCATGACCTCGGGAAAT
ATTCTCATGAATTCCAACGCTACATACTGGACGATGGGCCACGAACCGATCATTCATCTGCCGGGGCGTTGTATGCCGTC
CAACGGCTTGGGAAACTCGGGAGAGTCATAGCCTACCTTGTGGCCGGTCATCATGCCGGTCTCCTTGACTGGGCTGACAA
TACTGGCTCTAATCTGGAACGACGTCTTACCTCAACCGATTTGTTAGCCCGCGTGGTCCTCTCGGAACTCCCTCCCAATC
TGCTTGAACAGCAAATTCCAGCCGAACGCCCGAAACCGCCAGCCACCGACCTGACAGCTTCACTCTGGCTGCGAATGCTG
TTTTCCTGCCTCGTGGATGCCGATTTTCTCGATACCGAAGCGTTTTTCAATCCTGCACCGGTCGGCCAACGTAGCCGTTT
CCCGACAATCGAAGAACTACTTCCCCTGTTCGATGCCTATATGGCCGACAAACAGGCCACCGCCTTTGATACTCCCGTCA
ACAGGCTGCGCGCTGAAATCCTTCGCCAATCCGTTGGTAAGGCTTTTCACTCACCGGGGTTTTTCTCCCTCACCGTTCCA
ACCGGCGGCGGCAAGACCCTCTCGTCAATGGCTTTCGCCCTCAACCATGCCCGCGCCCACGGCAAGCGCCGCATCATTTA
CGTCATCCCCTATACCAGCATTATCGAACAGACCGCCGATCAGTTCCGGGAGGTATTCGGTGATTCGGTCGTGGAACACC
ACAGCAACGTGGCCCGTCAGGACAGTGACGAGGAAGGACAGCGCCTGCGCCTGGCGTCTGAAAACTGGGATGCACCGGTC
ATCGTCACCACCTCGGTTCAGTTCTTCGAATCGCTCTTTGCCAGCCGCACCAGCCGGTGCCGCAAGCTGCACAACATCGT
CAACAGTGTGGTGGTCCTCGACGAGGCCCAACTACTCCCTCCGGATTTCCTTAATCCGATTCTCGAAGCCCTCAAGGAGT
TGCAGAAGAACTACGGGACCACGGTAGTCATTTGTACGGCTACCCAGCCGGCCCTTGGTCCGCATCAATCGGCGAACTTC
GACTTCAAGGGGATTCCCGAGATAACGGAAATTATGGACGATCCGGCGAAGCTCCATGTGAAGCTCAAGAGGACTCGTAT
CCATAAACTGCGTGACCTTGCCCCGGTTTCATGGGATGAGCTTGCCGAGGAGCTTGAGTGGCAGGATTCAGCTCTCTGCA
TCGTCAACCGCCGCGACGATGCCCGCACGCTGTGGGAAAAGATGCCGAAGGGGACGATTCATCTCTCCGCGCTCATGTGC
GGAGCCCATCGGGCACGGAAGATCGCCGAGATCAAGGAGCGGCTCAGGAACAGGGAACCGACCCGTGTCATCAGCACCCA
GCTGGTGGAAGCGGGGGTGGACGTGGATTTCCCTATTGTTTATCGGGCTGCGGCCGGCCTCGACTCAATTGCCCAGGCAG
CCGGGCGGTGCAATAGGGAGGGGCTGCTGGAATGGGGGGAAGTATTCGTCTTTACCCCACCGTCAAAAATCCCGGCGGGG
CACCTTCAGCAGGCGGCGGGGATCGGCATGCGGCTTCTGGCCGAAGCAGAAAGTGACCCGTTGTCCATGGAGCGATTTGA
GGCCTTTTTCAGGGAGTTCTACTGGATGCGCGGCGACCGCCTTGACCGTGAAAATATCATCGGCCTGTTGCGGAACGATG
TGGGGTTGCGATTCAGCTTCCGCACCGCGGCCAGAAAGTTTCAGCTTATTGACGAGAGTGCCCAGGCGCCGGTGATCGTC
CAATTCGAGAATGACGAACTGCTGTCTCTGCTGGAACGCCAGGGACCGGAGCGCTGGCTGCTGCGAAAACTTCAACGTTC
GGTGGTCAACCTGCCGCGCTACCTGCACAATCGTTTGTTGTCTGAAGGGGCAATCCGGGAAAGGTGTCCCGGTATCTTCG
TGCAGGCACATGGCGCCCTGTATCACCCTGATCTCGGTTTCTGTCCGGATAAGTCGATCGTGTACGAGCCTGACGAATTA
ATCGGATGA

Upstream 100 bases:

>100_bases
CAGCAGGAGAACATATTGTGACTTGTTTTGTCGCAATTGTAGGTTAGGATGGGTTCACTGTTTTTGATTTGAGTGTCCGG
CGGTGTTCCTGGAGGGGAAG

Downstream 100 bases:

>100_bases
GACTTGACAATTATTTCAGTTTAGATAAAAGGTAAAACAGATTCCAGTAAATGGAAAAGGATTGAAACAGTTTCGAAAAC
AGGTGGCAAAGTGAAAGCGC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; CRISPR-Associated Helicase Cas3 Core; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; CRISPR-Associated Helicase Cas3 Family; Helicases; Cas3 Family CRISPR-Associated Helicase; Helicase-Like Protein; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MRERPVAHLAEDGRVHGLEEHLCGTAYFAAAFAGEFGCAGWGRLAGIWHDLGKYSHEFQRYILDDGPRTDHSSAGALYAV
QRLGKLGRVIAYLVAGHHAGLLDWADNTGSNLERRLTSTDLLARVVLSELPPNLLEQQIPAERPKPPATDLTASLWLRML
FSCLVDADFLDTEAFFNPAPVGQRSRFPTIEELLPLFDAYMADKQATAFDTPVNRLRAEILRQSVGKAFHSPGFFSLTVP
TGGGKTLSSMAFALNHARAHGKRRIIYVIPYTSIIEQTADQFREVFGDSVVEHHSNVARQDSDEEGQRLRLASENWDAPV
IVTTSVQFFESLFASRTSRCRKLHNIVNSVVVLDEAQLLPPDFLNPILEALKELQKNYGTTVVICTATQPALGPHQSANF
DFKGIPEITEIMDDPAKLHVKLKRTRIHKLRDLAPVSWDELAEELEWQDSALCIVNRRDDARTLWEKMPKGTIHLSALMC
GAHRARKIAEIKERLRNREPTRVISTQLVEAGVDVDFPIVYRAAAGLDSIAQAAGRCNREGLLEWGEVFVFTPPSKIPAG
HLQQAAGIGMRLLAEAESDPLSMERFEAFFREFYWMRGDRLDRENIIGLLRNDVGLRFSFRTAARKFQLIDESAQAPVIV
QFENDELLSLLERQGPERWLLRKLQRSVVNLPRYLHNRLLSEGAIRERCPGIFVQAHGALYHPDLGFCPDKSIVYEPDEL
IG

Sequences:

>Translated_722_residues
MRERPVAHLAEDGRVHGLEEHLCGTAYFAAAFAGEFGCAGWGRLAGIWHDLGKYSHEFQRYILDDGPRTDHSSAGALYAV
QRLGKLGRVIAYLVAGHHAGLLDWADNTGSNLERRLTSTDLLARVVLSELPPNLLEQQIPAERPKPPATDLTASLWLRML
FSCLVDADFLDTEAFFNPAPVGQRSRFPTIEELLPLFDAYMADKQATAFDTPVNRLRAEILRQSVGKAFHSPGFFSLTVP
TGGGKTLSSMAFALNHARAHGKRRIIYVIPYTSIIEQTADQFREVFGDSVVEHHSNVARQDSDEEGQRLRLASENWDAPV
IVTTSVQFFESLFASRTSRCRKLHNIVNSVVVLDEAQLLPPDFLNPILEALKELQKNYGTTVVICTATQPALGPHQSANF
DFKGIPEITEIMDDPAKLHVKLKRTRIHKLRDLAPVSWDELAEELEWQDSALCIVNRRDDARTLWEKMPKGTIHLSALMC
GAHRARKIAEIKERLRNREPTRVISTQLVEAGVDVDFPIVYRAAAGLDSIAQAAGRCNREGLLEWGEVFVFTPPSKIPAG
HLQQAAGIGMRLLAEAESDPLSMERFEAFFREFYWMRGDRLDRENIIGLLRNDVGLRFSFRTAARKFQLIDESAQAPVIV
QFENDELLSLLERQGPERWLLRKLQRSVVNLPRYLHNRLLSEGAIRERCPGIFVQAHGALYHPDLGFCPDKSIVYEPDEL
IG
>Mature_722_residues
MRERPVAHLAEDGRVHGLEEHLCGTAYFAAAFAGEFGCAGWGRLAGIWHDLGKYSHEFQRYILDDGPRTDHSSAGALYAV
QRLGKLGRVIAYLVAGHHAGLLDWADNTGSNLERRLTSTDLLARVVLSELPPNLLEQQIPAERPKPPATDLTASLWLRML
FSCLVDADFLDTEAFFNPAPVGQRSRFPTIEELLPLFDAYMADKQATAFDTPVNRLRAEILRQSVGKAFHSPGFFSLTVP
TGGGKTLSSMAFALNHARAHGKRRIIYVIPYTSIIEQTADQFREVFGDSVVEHHSNVARQDSDEEGQRLRLASENWDAPV
IVTTSVQFFESLFASRTSRCRKLHNIVNSVVVLDEAQLLPPDFLNPILEALKELQKNYGTTVVICTATQPALGPHQSANF
DFKGIPEITEIMDDPAKLHVKLKRTRIHKLRDLAPVSWDELAEELEWQDSALCIVNRRDDARTLWEKMPKGTIHLSALMC
GAHRARKIAEIKERLRNREPTRVISTQLVEAGVDVDFPIVYRAAAGLDSIAQAAGRCNREGLLEWGEVFVFTPPSKIPAG
HLQQAAGIGMRLLAEAESDPLSMERFEAFFREFYWMRGDRLDRENIIGLLRNDVGLRFSFRTAARKFQLIDESAQAPVIV
QFENDELLSLLERQGPERWLLRKLQRSVVNLPRYLHNRLLSEGAIRERCPGIFVQAHGALYHPDLGFCPDKSIVYEPDEL
IG

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81114; Mature: 81114

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERPVAHLAEDGRVHGLEEHLCGTAYFAAAFAGEFGCAGWGRLAGIWHDLGKYSHEFQR
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
YILDDGPRTDHSSAGALYAVQRLGKLGRVIAYLVAGHHAGLLDWADNTGSNLERRLTSTD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
LLARVVLSELPPNLLEQQIPAERPKPPATDLTASLWLRMLFSCLVDADFLDTEAFFNPAP
HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
VGQRSRFPTIEELLPLFDAYMADKQATAFDTPVNRLRAEILRQSVGKAFHSPGFFSLTVP
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
TGGGKTLSSMAFALNHARAHGKRRIIYVIPYTSIIEQTADQFREVFGDSVVEHHSNVARQ
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSDEEGQRLRLASENWDAPVIVTTSVQFFESLFASRTSRCRKLHNIVNSVVVLDEAQLLP
CCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
PDFLNPILEALKELQKNYGTTVVICTATQPALGPHQSANFDFKGIPEITEIMDDPAKLHV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEEE
KLKRTRIHKLRDLAPVSWDELAEELEWQDSALCIVNRRDDARTLWEKMPKGTIHLSALMC
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCEEHHHHHH
GAHRARKIAEIKERLRNREPTRVISTQLVEAGVDVDFPIVYRAAAGLDSIAQAAGRCNRE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCC
GLLEWGEVFVFTPPSKIPAGHLQQAAGIGMRLLAEAESDPLSMERFEAFFREFYWMRGDR
CCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
LDRENIIGLLRNDVGLRFSFRTAARKFQLIDESAQAPVIVQFENDELLSLLERQGPERWL
CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHH
LRKLQRSVVNLPRYLHNRLLSEGAIRERCPGIFVQAHGALYHPDLGFCPDKSIVYEPDEL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCEECCCCCCCCCCCEEECCHHH
IG
CC
>Mature Secondary Structure
MRERPVAHLAEDGRVHGLEEHLCGTAYFAAAFAGEFGCAGWGRLAGIWHDLGKYSHEFQR
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
YILDDGPRTDHSSAGALYAVQRLGKLGRVIAYLVAGHHAGLLDWADNTGSNLERRLTSTD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
LLARVVLSELPPNLLEQQIPAERPKPPATDLTASLWLRMLFSCLVDADFLDTEAFFNPAP
HHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCC
VGQRSRFPTIEELLPLFDAYMADKQATAFDTPVNRLRAEILRQSVGKAFHSPGFFSLTVP
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
TGGGKTLSSMAFALNHARAHGKRRIIYVIPYTSIIEQTADQFREVFGDSVVEHHSNVARQ
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DSDEEGQRLRLASENWDAPVIVTTSVQFFESLFASRTSRCRKLHNIVNSVVVLDEAQLLP
CCCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
PDFLNPILEALKELQKNYGTTVVICTATQPALGPHQSANFDFKGIPEITEIMDDPAKLHV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHEEE
KLKRTRIHKLRDLAPVSWDELAEELEWQDSALCIVNRRDDARTLWEKMPKGTIHLSALMC
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCEEHHHHHH
GAHRARKIAEIKERLRNREPTRVISTQLVEAGVDVDFPIVYRAAAGLDSIAQAAGRCNRE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCC
GLLEWGEVFVFTPPSKIPAGHLQQAAGIGMRLLAEAESDPLSMERFEAFFREFYWMRGDR
CCCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
LDRENIIGLLRNDVGLRFSFRTAARKFQLIDESAQAPVIVQFENDELLSLLERQGPERWL
CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCHHHH
LRKLQRSVVNLPRYLHNRLLSEGAIRERCPGIFVQAHGALYHPDLGFCPDKSIVYEPDEL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCEECCCCCCCCCCCEEECCHHH
IG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA