| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is zraS [H]
Identifier: 78222275
GI number: 78222275
Start: 1173596
End: 1175617
Strand: Reverse
Name: zraS [H]
Synonym: Gmet_1057
Alternate gene names: 78222275
Gene position: 1175617-1173596 (Counterclockwise)
Preceding gene: 78222276
Following gene: 78222274
Centisome position: 29.41
GC content: 65.18
Gene sequence:
>2022_bases ATGGGACCGAAGCGCTTCCCCATCCGCCTCAAGCTCACCTTCGCCACCCTCATCCCCCTCTTCGTGGCCTCGGTCATCTG CTGGGTCATCGGCATCTCCATCATCAACTCCCGGATCGTGACCCAGGCCCAGGAAAAGGTCCGCACCGACCTGAACTCGG CCCGGGCCGTCTACCAGAGCGAACTTGACCACATCCGGGACGTGGTCAAGTTCACCGCCACCAACCCCTTCACCTCCATG ATTATCTCCCAGGGGGACCGCGCGACCCTCAACAACCTCCTCTCACCGCGGATGGCCAGCGAAGGGCTCGACTTCCTCAC CGCCGTGGACCGGTCGGGCCGGGTCGTCTTCCGGGCCAGCAACCACGGGGCCTTCGGCGACAGCAAGATCAACGACCAGA TCGTCTCCCGGGCGTTGCAGGGCGAGCACATCGCCGGCACCGAGGTGATCCCCCCCGGGGAACTGGTGAAAGAAGGGAAA GAGCTGGCCGCCAAGGCGTCCATCCAGATCCTCCCCACCCTCCACGCCCGCCAGCGGGACGAGTCCGTGGAGCGCTCCGG CATGGCCATGGTGGTATCGGTGCCGGTGCGGGACCAGGCCGGGACGGTCGCGGGTGCCCTCTACGGAGGAGTTCTCCTCA ACGGCAACAACACCCTGGTGGACCGGATCAAGAAGATCGTCTTCGAAGCGGTGAGCTACCAGGGGGAGGACGTGGGAACC GCCACCATCTTCCTGGGGGACTTGCGGATAGCCACCAACGTCCTCCTTTCGCCGGAACGGCGGGCCATCGGCACGAGGCT CTCGGAGGAGGTCTACAACCGGGTCCTCCTGGCCCGCGAGAAATGGGTGGGACGGGCCTTTGTGGTGAACGACTGGTACT ACTCCGCCTACGAGCCGATCCTGAACCTCCAGGGGAAGCCGGTGGGATCCCTCTACGTGGGGGTCATGGAACGCCCCTTC CTGGAGATGAAACGGGAGATATCCCTCATCTTCGGGGTGGTCCTCCTCTGCGGCTCCCTCATCGGGCTGGCCATTTCGAG CTTCATCGCCTCGCGCCTCGCCCGCCCCATCAAGGAACTGGAAAACGCAGCCCGCCGGATCACCGCCGGCGAACGCGACA GTGCCATAACCATCCAGACCCGCGACGAGATCGGCGACCTGGCAGGGGAGTTCGCCCAGATGACCAGAACCCTCGCCCAG CGGGAGGAGGACATCCGGAAGCTGAACCGGGACCTGGAGCAGAAGGTGCTGGACCGCACGGCCCAGCTGGAGGAAAAGAA CCTCCTTCTTGTGAAGACCCAGGAGGACCTGGTCAGGGCGGCAAAGCTGGCCGACATCGGCATGCTGGCCGCCGGCGTGG CCCACGAGATCAACAACCCCCTGGCGATCATCCGGGGGAACACGGAGCTGCTCCAGATGGCGATCCCCGAGGACGACCCG AGCCGGGAGGAGGTGGACACCATCGCCCAGCAGACGGGACGGGTGGAGCGGATCGTGGGGAGCCTCCTCAAGTTCGCCCG CCAGCAGAAGAAGGAACTGGGAACGGTGGAGGTCAACAGGCTCCTGGATGAGATCCTCAAGCAGGTGGGGCACCAGATTC CCCTTGCCGGCATCGACATCCGACGGGACTACGCCGCCGACATCCCCCTTCTGGAAGGAGACGGCGACCAGCTCCGCCAG GTCTTCACCAACCTCATCCTCAACGCCATCCAGGCCATGAAGGAGGGGGGAACTCTCACGGTGGGCACCTCCCGGGACAG CGAAGCCGGGACCTGTACCGTTGCCGTGGAGGACACGGGGGCCGGCATCCCCCCCGAAAACCTCAGGAACATCTTCAGCC CCTTCTTCACCACCCGCAACGACGGGACCGGCCTCGGCCTCGCGGTTTCCTACGGCATCGTCAGGGATCACGGGGGGAAT ATCCAGGTGGAGAGCACGGCGGGGACGGGGAGCACCTTCCGGGTGGTGCTGCCGCTGAAGCAGGGGGGGACGACTGACGT AAGCATCAGACAAGGGACTTAA
Upstream 100 bases:
>100_bases GGAGATCCTCGGCATCTCCCGCAAGACCCTCGACCGCAAGATCGTGGAGTATGCCCTCGCCATCCCCGGCCAAGGGATCT CCGGAACCCTGGACGACTGA
Downstream 100 bases:
>100_bases CTGCCTGATAGGGCTTGAAGCAGAACATTAAGGACAATACATCATGGACTTCAAAAGCGTACTCGACAAACTCCTCTCAT CCTTCGACGATCAGGGCATC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MGPKRFPIRLKLTFATLIPLFVASVICWVIGISIINSRIVTQAQEKVRTDLNSARAVYQSELDHIRDVVKFTATNPFTSM IISQGDRATLNNLLSPRMASEGLDFLTAVDRSGRVVFRASNHGAFGDSKINDQIVSRALQGEHIAGTEVIPPGELVKEGK ELAAKASIQILPTLHARQRDESVERSGMAMVVSVPVRDQAGTVAGALYGGVLLNGNNTLVDRIKKIVFEAVSYQGEDVGT ATIFLGDLRIATNVLLSPERRAIGTRLSEEVYNRVLLAREKWVGRAFVVNDWYYSAYEPILNLQGKPVGSLYVGVMERPF LEMKREISLIFGVVLLCGSLIGLAISSFIASRLARPIKELENAARRITAGERDSAITIQTRDEIGDLAGEFAQMTRTLAQ REEDIRKLNRDLEQKVLDRTAQLEEKNLLLVKTQEDLVRAAKLADIGMLAAGVAHEINNPLAIIRGNTELLQMAIPEDDP SREEVDTIAQQTGRVERIVGSLLKFARQQKKELGTVEVNRLLDEILKQVGHQIPLAGIDIRRDYAADIPLLEGDGDQLRQ VFTNLILNAIQAMKEGGTLTVGTSRDSEAGTCTVAVEDTGAGIPPENLRNIFSPFFTTRNDGTGLGLAVSYGIVRDHGGN IQVESTAGTGSTFRVVLPLKQGGTTDVSIRQGT
Sequences:
>Translated_673_residues MGPKRFPIRLKLTFATLIPLFVASVICWVIGISIINSRIVTQAQEKVRTDLNSARAVYQSELDHIRDVVKFTATNPFTSM IISQGDRATLNNLLSPRMASEGLDFLTAVDRSGRVVFRASNHGAFGDSKINDQIVSRALQGEHIAGTEVIPPGELVKEGK ELAAKASIQILPTLHARQRDESVERSGMAMVVSVPVRDQAGTVAGALYGGVLLNGNNTLVDRIKKIVFEAVSYQGEDVGT ATIFLGDLRIATNVLLSPERRAIGTRLSEEVYNRVLLAREKWVGRAFVVNDWYYSAYEPILNLQGKPVGSLYVGVMERPF LEMKREISLIFGVVLLCGSLIGLAISSFIASRLARPIKELENAARRITAGERDSAITIQTRDEIGDLAGEFAQMTRTLAQ REEDIRKLNRDLEQKVLDRTAQLEEKNLLLVKTQEDLVRAAKLADIGMLAAGVAHEINNPLAIIRGNTELLQMAIPEDDP SREEVDTIAQQTGRVERIVGSLLKFARQQKKELGTVEVNRLLDEILKQVGHQIPLAGIDIRRDYAADIPLLEGDGDQLRQ VFTNLILNAIQAMKEGGTLTVGTSRDSEAGTCTVAVEDTGAGIPPENLRNIFSPFFTTRNDGTGLGLAVSYGIVRDHGGN IQVESTAGTGSTFRVVLPLKQGGTTDVSIRQGT >Mature_672_residues GPKRFPIRLKLTFATLIPLFVASVICWVIGISIINSRIVTQAQEKVRTDLNSARAVYQSELDHIRDVVKFTATNPFTSMI ISQGDRATLNNLLSPRMASEGLDFLTAVDRSGRVVFRASNHGAFGDSKINDQIVSRALQGEHIAGTEVIPPGELVKEGKE LAAKASIQILPTLHARQRDESVERSGMAMVVSVPVRDQAGTVAGALYGGVLLNGNNTLVDRIKKIVFEAVSYQGEDVGTA TIFLGDLRIATNVLLSPERRAIGTRLSEEVYNRVLLAREKWVGRAFVVNDWYYSAYEPILNLQGKPVGSLYVGVMERPFL EMKREISLIFGVVLLCGSLIGLAISSFIASRLARPIKELENAARRITAGERDSAITIQTRDEIGDLAGEFAQMTRTLAQR EEDIRKLNRDLEQKVLDRTAQLEEKNLLLVKTQEDLVRAAKLADIGMLAAGVAHEINNPLAIIRGNTELLQMAIPEDDPS REEVDTIAQQTGRVERIVGSLLKFARQQKKELGTVEVNRLLDEILKQVGHQIPLAGIDIRRDYAADIPLLEGDGDQLRQV FTNLILNAIQAMKEGGTLTVGTSRDSEAGTCTVAVEDTGAGIPPENLRNIFSPFFTTRNDGTGLGLAVSYGIVRDHGGNI QVESTAGTGSTFRVVLPLKQGGTTDVSIRQGT
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=39.8230088495575, Blast_Score=159, Evalue=5e-40, Organism=Escherichia coli, GI1788549, Length=241, Percent_Identity=34.4398340248963, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1790300, Length=239, Percent_Identity=33.0543933054393, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI87081816, Length=353, Percent_Identity=29.1784702549575, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1789149, Length=353, Percent_Identity=27.1954674220963, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788393, Length=319, Percent_Identity=25.3918495297806, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=30.1204819277108, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1786600, Length=293, Percent_Identity=27.3037542662116, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=28.2407407407407, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790346, Length=220, Percent_Identity=26.3636363636364, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=26.9058295964126, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=111, Percent_Identity=38.7387387387387, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787894, Length=239, Percent_Identity=28.8702928870293, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1790861, Length=206, Percent_Identity=31.0679611650485, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786783, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789808, Length=238, Percent_Identity=26.0504201680672, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 73492; Mature: 73361
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPKRFPIRLKLTFATLIPLFVASVICWVIGISIINSRIVTQAQEKVRTDLNSARAVYQS CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELDHIRDVVKFTATNPFTSMIISQGDRATLNNLLSPRMASEGLDFLTAVDRSGRVVFRAS HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCHHHHCCCHHHHHHCCCCCEEEEEC NHGAFGDSKINDQIVSRALQGEHIAGTEVIPPGELVKEGKELAAKASIQILPTLHARQRD CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHH ESVERSGMAMVVSVPVRDQAGTVAGALYGGVLLNGNNTLVDRIKKIVFEAVSYQGEDVGT HHHHHCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCE ATIFLGDLRIATNVLLSPERRAIGTRLSEEVYNRVLLAREKWVGRAFVVNDWYYSAYEPI EEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH LNLQGKPVGSLYVGVMERPFLEMKREISLIFGVVLLCGSLIGLAISSFIASRLARPIKEL HCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAARRITAGERDSAITIQTRDEIGDLAGEFAQMTRTLAQREEDIRKLNRDLEQKVLDRT HHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLEEKNLLLVKTQEDLVRAAKLADIGMLAAGVAHEINNPLAIIRGNTELLQMAIPEDDP HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEEECCCCCC SREEVDTIAQQTGRVERIVGSLLKFARQQKKELGTVEVNRLLDEILKQVGHQIPLAGIDI CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE RRDYAADIPLLEGDGDQLRQVFTNLILNAIQAMKEGGTLTVGTSRDSEAGTCTVAVEDTG CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCC AGIPPENLRNIFSPFFTTRNDGTGLGLAVSYGIVRDHGGNIQVESTAGTGSTFRVVLPLK CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECEEEECCCCEEEEECCCCCCEEEEEEEEC QGGTTDVSIRQGT CCCCCEEEEECCC >Mature Secondary Structure GPKRFPIRLKLTFATLIPLFVASVICWVIGISIINSRIVTQAQEKVRTDLNSARAVYQS CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELDHIRDVVKFTATNPFTSMIISQGDRATLNNLLSPRMASEGLDFLTAVDRSGRVVFRAS HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCHHHHCCCHHHHHHCCCCCEEEEEC NHGAFGDSKINDQIVSRALQGEHIAGTEVIPPGELVKEGKELAAKASIQILPTLHARQRD CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHH ESVERSGMAMVVSVPVRDQAGTVAGALYGGVLLNGNNTLVDRIKKIVFEAVSYQGEDVGT HHHHHCCCEEEEEECCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCE ATIFLGDLRIATNVLLSPERRAIGTRLSEEVYNRVLLAREKWVGRAFVVNDWYYSAYEPI EEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHH LNLQGKPVGSLYVGVMERPFLEMKREISLIFGVVLLCGSLIGLAISSFIASRLARPIKEL HCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAARRITAGERDSAITIQTRDEIGDLAGEFAQMTRTLAQREEDIRKLNRDLEQKVLDRT HHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLEEKNLLLVKTQEDLVRAAKLADIGMLAAGVAHEINNPLAIIRGNTELLQMAIPEDDP HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEEECCCCCC SREEVDTIAQQTGRVERIVGSLLKFARQQKKELGTVEVNRLLDEILKQVGHQIPLAGIDI CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEE RRDYAADIPLLEGDGDQLRQVFTNLILNAIQAMKEGGTLTVGTSRDSEAGTCTVAVEDTG CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCC AGIPPENLRNIFSPFFTTRNDGTGLGLAVSYGIVRDHGGNIQVESTAGTGSTFRVVLPLK CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECEEEECCCCEEEEECCCCCCEEEEEEEEC QGGTTDVSIRQGT CCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]