| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222259
Identifier: 78222259
GI number: 78222259
Start: 1155472
End: 1156281
Strand: Reverse
Name: 78222259
Synonym: Gmet_1041
Alternate gene names: NA
Gene position: 1156281-1155472 (Counterclockwise)
Preceding gene: 78222260
Following gene: 78222258
Centisome position: 28.93
GC content: 60.37
Gene sequence:
>810_bases ATGAATTCGCTGCGCGGCATTATCCTTACTCTCGTTGCCTTGGTAGTCCTCTGCGGCGCCGCCTCGGCCGAAGAGCGCCT CAAGATGTCCACCACCACCTCCACCCAGGACTCGGGTCTCCTGAAGGTGCTTCTTCCTCCCTTCGAAAAAAAGAACAACT GCAAGGTTGACGTAATTGCCGTGGGGACGGGGCAGGCCCTGAAACTGGGTGAAGCCGGCGACGTGGACGTGGTGTTCGTC CACGCCCGCAAACTGGAGGACAAGTTCGTGGCCGACGGCTTCGGCGTGAACCGCAAGGATGTCATGTATAATGACTTCGT CATCATCGGTCCCAAGAACGACCCGGCCGGCATCGCCAAGGCGAAGACCGCCGCCGAAGCCCTGAAGCTGATCGCCGCCA GGCAGGCCACCTTCGTCTCCCGGGGTGACAAATCCGGCACCCACATGAAGGAACTGGAACTCTGGAAGGCCGCCGGCACC GACCCCAAGGGGAGCTGGTACATCGAGGCGGGCCAGGGGATGGGGCCGGTCATCACCATGGCCACCGAGCGGCGCGGCTA CACCCTCGCCGACCGGGGTACCTACAACGCCTTCAAGGGGCAGAAGACTGACCTCGCCATCGTCTTCCAAGGGGAGAAGG GACTCTTCAACCCCTACGGAATCATCGCCGTGAACCCGAAAAAATTCCCCCACGTGAAGTATGACCTGGCCATGAAATTC ATCGACTACGTCACCGGTCCCGAAGGGTTGAAGATCATCTCCGGCTACAAGGCCCACGGCGAGCCGGTGTTCTTTATCTA CAAGAAGTAG
Upstream 100 bases:
>100_bases GATCCAGATTCAACGGCTTCAAATGCAGGGAAAAATGATATAGTAACCCCAAAATGACACCTCATTCCGCCAACCATAAC CACACGCACAAGGAGGTTGT
Downstream 100 bases:
>100_bases AAGAAGTGGTTATTCTTCTGGCTTCTGGCTCCTGAATTCGGTGATAGTACACAAATGGACTTTTTTTCCGAATCTCTCAA AACTGCTCTGGAACTGATCA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; TUNGstate ABC Transporter Permease-Like Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Periplasmic Protein; Molybdate Or TUNGstate Transport; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNSLRGIILTLVALVVLCGAASAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNCKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIIGPKNDPAGIAKAKTAAEALKLIAARQATFVSRGDKSGTHMKELELWKAAGT DPKGSWYIEAGQGMGPVITMATERRGYTLADRGTYNAFKGQKTDLAIVFQGEKGLFNPYGIIAVNPKKFPHVKYDLAMKF IDYVTGPEGLKIISGYKAHGEPVFFIYKK
Sequences:
>Translated_269_residues MNSLRGIILTLVALVVLCGAASAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNCKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIIGPKNDPAGIAKAKTAAEALKLIAARQATFVSRGDKSGTHMKELELWKAAGT DPKGSWYIEAGQGMGPVITMATERRGYTLADRGTYNAFKGQKTDLAIVFQGEKGLFNPYGIIAVNPKKFPHVKYDLAMKF IDYVTGPEGLKIISGYKAHGEPVFFIYKK >Mature_269_residues MNSLRGIILTLVALVVLCGAASAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNCKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIIGPKNDPAGIAKAKTAAEALKLIAARQATFVSRGDKSGTHMKELELWKAAGT DPKGSWYIEAGQGMGPVITMATERRGYTLADRGTYNAFKGQKTDLAIVFQGEKGLFNPYGIIAVNPKKFPHVKYDLAMKF IDYVTGPEGLKIISGYKAHGEPVFFIYKK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29179; Mature: 29179
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLRGIILTLVALVVLCGAASAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNCKVDVIA CCCHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEE VGTGQALKLGEAGDVDVVFVHARKLEDKFVADGFGVNRKDVMYNDFVIIGPKNDPAGIAK ECCCCEEEECCCCCEEEEEEEEECCCCHHEECCCCCCCCCEEEECEEEECCCCCCCCHHH AKTAAEALKLIAARQATFVSRGDKSGTHMKELELWKAAGTDPKGSWYIEAGQGMGPVITM HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEE ATERRGYTLADRGTYNAFKGQKTDLAIVFQGEKGLFNPYGIIAVNPKKFPHVKYDLAMKF EECCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHH IDYVTGPEGLKIISGYKAHGEPVFFIYKK HHHHCCCCCEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MNSLRGIILTLVALVVLCGAASAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNCKVDVIA CCCHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEE VGTGQALKLGEAGDVDVVFVHARKLEDKFVADGFGVNRKDVMYNDFVIIGPKNDPAGIAK ECCCCEEEECCCCCEEEEEEEEECCCCHHEECCCCCCCCCEEEECEEEECCCCCCCCHHH AKTAAEALKLIAARQATFVSRGDKSGTHMKELELWKAAGTDPKGSWYIEAGQGMGPVITM HHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEE ATERRGYTLADRGTYNAFKGQKTDLAIVFQGEKGLFNPYGIIAVNPKKFPHVKYDLAMKF EECCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHH IDYVTGPEGLKIISGYKAHGEPVFFIYKK HHHHCCCCCEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA