| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is modB [H]
Identifier: 78222258
GI number: 78222258
Start: 1154731
End: 1155417
Strand: Reverse
Name: modB [H]
Synonym: Gmet_1040
Alternate gene names: 78222258
Gene position: 1155417-1154731 (Counterclockwise)
Preceding gene: 78222259
Following gene: 78222257
Centisome position: 28.9
GC content: 65.65
Gene sequence:
>687_bases ATGGACTTTTTTTCCGAATCTCTCAAAACTGCTCTGGAACTGATCACCTCCCGGGACCCTGACGTGGTGAGCGCGGTAAC CGTTTCGGTGGTGGTGTCGCTCTGGTCGACCCTCTTCGCCTCCCTGGCCGGCGTGCCGGCCGGGGTGGCGGTGGCGGTGA CGGAGTTCACCGGCAAGCGGGCCGTGGTGACGCTTCTCAACACCCTCATGGCCCTGCCGACGGTGGTGGTGGGCCTTTTC GTCTACAGCCTCATCAGCCGCCAGGGGCCCCTGGGAGGGTTCGGAATCCTTTTCACCCCCTGGGCCATGGTGGTGGGGCA GACGCTCCTGGCGATCCCCATCGTGGCCAACCTGACCATGAGCGCCATCAAAGGGGCCGACCCACGCATCGTTCCCACGG CCCTCACCCTGGGGGCCGGACCATTCGAGAGCATCCGCCGGCTGGTGGTGGAGATGCGCTTCGGGATCATGGCGGCGGTG ATCGCCGGCTTCGGCCGGGTCATCGCCGAGGTGGGAGTCGCCATGATGCTCGGCGGCAACATCCGCGGGTACACCCGCAC CATGACCACCGCCATCGCCATGGAGACCGGCAAGGGGGAATTCGCCCTGGGACTTGCCCTGGGGCTCATCCTCATGACGG TGGCCCTGATGATCAACATGGCCCTCAACGCCCTGCAGCAGAGGTAA
Upstream 100 bases:
>100_bases CTACAAGGCCCACGGCGAGCCGGTGTTCTTTATCTACAAGAAGTAGAAGAAGTGGTTATTCTTCTGGCTTCTGGCTCCTG AATTCGGTGATAGTACACAA
Downstream 100 bases:
>100_bases CCCTTCGTGAGCATCCGCTACCGACTTGACAGCATCCAGACCTCTTACGACTCCCGGACCGTCCTGGACATCGGCCAGCT CACCCTCCGTGCGGGCCGCC
Product: binding-protein dependent transport system inner membrane protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MDFFSESLKTALELITSRDPDVVSAVTVSVVVSLWSTLFASLAGVPAGVAVAVTEFTGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGGFGILFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVVEMRFGIMAAV IAGFGRVIAEVGVAMMLGGNIRGYTRTMTTAIAMETGKGEFALGLALGLILMTVALMINMALNALQQR
Sequences:
>Translated_228_residues MDFFSESLKTALELITSRDPDVVSAVTVSVVVSLWSTLFASLAGVPAGVAVAVTEFTGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGGFGILFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVVEMRFGIMAAV IAGFGRVIAEVGVAMMLGGNIRGYTRTMTTAIAMETGKGEFALGLALGLILMTVALMINMALNALQQR >Mature_228_residues MDFFSESLKTALELITSRDPDVVSAVTVSVVVSLWSTLFASLAGVPAGVAVAVTEFTGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGGFGILFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVVEMRFGIMAAV IAGFGRVIAEVGVAMMLGGNIRGYTRTMTTAIAMETGKGEFALGLALGLILMTVALMINMALNALQQR
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=229, Percent_Identity=24.8908296943231, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23847; Mature: 23847
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFSESLKTALELITSRDPDVVSAVTVSVVVSLWSTLFASLAGVPAGVAVAVTEFTGKR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH AVVTLLNTLMALPTVVVGLFVYSLISRQGPLGGFGILFTPWAMVVGQTLLAIPIVANLTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKGADPRIVPTALTLGAGPFESIRRLVVEMRFGIMAAVIAGFGRVIAEVGVAMMLGGN HHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IRGYTRTMTTAIAMETGKGEFALGLALGLILMTVALMINMALNALQQR CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFFSESLKTALELITSRDPDVVSAVTVSVVVSLWSTLFASLAGVPAGVAVAVTEFTGKR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH AVVTLLNTLMALPTVVVGLFVYSLISRQGPLGGFGILFTPWAMVVGQTLLAIPIVANLTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKGADPRIVPTALTLGAGPFESIRRLVVEMRFGIMAAVIAGFGRVIAEVGVAMMLGGN HHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IRGYTRTMTTAIAMETGKGEFALGLALGLILMTVALMINMALNALQQR CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]