| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222235
Identifier: 78222235
GI number: 78222235
Start: 1128376
End: 1129632
Strand: Direct
Name: 78222235
Synonym: Gmet_1015
Alternate gene names: NA
Gene position: 1128376-1129632 (Clockwise)
Preceding gene: 78222234
Following gene: 78222236
Centisome position: 28.23
GC content: 54.18
Gene sequence:
>1257_bases ATGAAACGATCAGCGTTCGTTCTCTTGGCAGTTCTGGCAGGTTACCTCCCATTCTGCCCAGCTGCTCCAGCCGAAGCAGT CGATACTCCTTCGGCCGGTCTTTACAGGAGCATAACCCAGCGTGAGGAAGGGGTCATTTCCAGGACCGCGGTCATGGCGC TCCGCTCCATAGTCCAGGCGCGGGCGGACATTCACCAGAAGATGCTGGAAAAGGCTCGTCATGACCTGAACGAGGCAACA CTACTCATGGAAACCATCCGGTCCGACCTGTCGACTGCCGTGGTAAGAAACCGCATCTGGATTGCCAGAACACATCTGGA GTACGAAACCGCCCAGAGGGTGATGGAGGATTTACCGCCGATTTTTAGCGCCCTGCGCGATATAGAGGAGTATTTCCCGA CAGACAAGGCAAAACGGCATATTGACAACGCCAAAAGGTATCTGGAAAAGGGGGAGAAAAAAGGAGCTGAAAGGGAATTG CACCTGGCTGACAACGAACTCGTTGTTGTAGAGGTGGAACTTCCAATAGCTAAAGCGGAGACATATGTGACCAGGGCGAA GGAGTATCTCGCCCGAAACGATGTCACGAAGGCCGATGAGGCACTAAAAGTGGCGGAGGAAAAGGCTCAGGCGGTTCCTG TCGGCATGGAGTCTGCGCTTCAAAGGGCACAGAGCAGTTTCTGGAGGGCCTCCCGCTCCTATGCCGCCGGTAAACCGGCT GAAGCCCGGACGTATATCGAGCAGGCAAGAATGTATCTCGAAAAGGCAGCGAAGACAGGAAACGTCAAGGGGAAGGAGGA GGTTGGCACACTTTCCCGGAGCGTGACCGAGCTCGAACAAAAACTGGACAAAGGGGATAATACCGCTGAATCCGCGTTGG CATCAGCCTGGAATAAGAGCAGGGCCCTTGCTGAGCGAGAATCTGAATATCTGGCAGCCCGATGGGAAGAGGCCGAAACG ACCCTGTCGGTGGACGATGATCTCATTGAAGCAAAGCTGCACGTCTCGTACGGGGAAACGTACCAGGTAATAACCAGAGA GTCGGCAAAGGCCGCAGAAGAGCTCGACAGGGCCGCCGCCTATCTTGACAAGGCCATGAAGAATTCTCTCCTCGACCAGG CAACCATAAAGAGAATCGGGGCGATCAGGAAAGAAGTTACATCCCTCAGAGAAGCCCCTGAGCAAAGCGATGAAGCTTGG AAGGATCGTTACGACCAGATCAAGGATGAGATAAACAAACTGCTGCGGCAAGTTTGA
Upstream 100 bases:
>100_bases CTTTCTATGTGACGCTGGAAACTTCGTAGGGGTGTCTCTCAGGCACGGCAGTAAGATTGGTGCCTATCGGCTGAAGCATT GACTAAAGGAGGAGTAAGGC
Downstream 100 bases:
>100_bases CCTGAATCGCCAGGGGCCGATAGGCAGAATGCATCAGCTGCGGGCTCTGCATAAAGACAGCGTGAGGTGAGAGCATGCAA CGAAACAACCCCGACAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKRSAFVLLAVLAGYLPFCPAAPAEAVDTPSAGLYRSITQREEGVISRTAVMALRSIVQARADIHQKMLEKARHDLNEAT LLMETIRSDLSTAVVRNRIWIARTHLEYETAQRVMEDLPPIFSALRDIEEYFPTDKAKRHIDNAKRYLEKGEKKGAEREL HLADNELVVVEVELPIAKAETYVTRAKEYLARNDVTKADEALKVAEEKAQAVPVGMESALQRAQSSFWRASRSYAAGKPA EARTYIEQARMYLEKAAKTGNVKGKEEVGTLSRSVTELEQKLDKGDNTAESALASAWNKSRALAERESEYLAARWEEAET TLSVDDDLIEAKLHVSYGETYQVITRESAKAAEELDRAAAYLDKAMKNSLLDQATIKRIGAIRKEVTSLREAPEQSDEAW KDRYDQIKDEINKLLRQV
Sequences:
>Translated_418_residues MKRSAFVLLAVLAGYLPFCPAAPAEAVDTPSAGLYRSITQREEGVISRTAVMALRSIVQARADIHQKMLEKARHDLNEAT LLMETIRSDLSTAVVRNRIWIARTHLEYETAQRVMEDLPPIFSALRDIEEYFPTDKAKRHIDNAKRYLEKGEKKGAEREL HLADNELVVVEVELPIAKAETYVTRAKEYLARNDVTKADEALKVAEEKAQAVPVGMESALQRAQSSFWRASRSYAAGKPA EARTYIEQARMYLEKAAKTGNVKGKEEVGTLSRSVTELEQKLDKGDNTAESALASAWNKSRALAERESEYLAARWEEAET TLSVDDDLIEAKLHVSYGETYQVITRESAKAAEELDRAAAYLDKAMKNSLLDQATIKRIGAIRKEVTSLREAPEQSDEAW KDRYDQIKDEINKLLRQV >Mature_418_residues MKRSAFVLLAVLAGYLPFCPAAPAEAVDTPSAGLYRSITQREEGVISRTAVMALRSIVQARADIHQKMLEKARHDLNEAT LLMETIRSDLSTAVVRNRIWIARTHLEYETAQRVMEDLPPIFSALRDIEEYFPTDKAKRHIDNAKRYLEKGEKKGAEREL HLADNELVVVEVELPIAKAETYVTRAKEYLARNDVTKADEALKVAEEKAQAVPVGMESALQRAQSSFWRASRSYAAGKPA EARTYIEQARMYLEKAAKTGNVKGKEEVGTLSRSVTELEQKLDKGDNTAESALASAWNKSRALAERESEYLAARWEEAET TLSVDDDLIEAKLHVSYGETYQVITRESAKAAEELDRAAAYLDKAMKNSLLDQATIKRIGAIRKEVTSLREAPEQSDEAW KDRYDQIKDEINKLLRQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47032; Mature: 47032
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSAFVLLAVLAGYLPFCPAAPAEAVDTPSAGLYRSITQREEGVISRTAVMALRSIVQA CCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADIHQKMLEKARHDLNEATLLMETIRSDLSTAVVRNRIWIARTHLEYETAQRVMEDLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCH IFSALRDIEEYFPTDKAKRHIDNAKRYLEKGEKKGAERELHLADNELVVVEVELPIAKAE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCHHHHH TYVTRAKEYLARNDVTKADEALKVAEEKAQAVPVGMESALQRAQSSFWRASRSYAAGKPA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EARTYIEQARMYLEKAAKTGNVKGKEEVGTLSRSVTELEQKLDKGDNTAESALASAWNKS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RALAERESEYLAARWEEAETTLSVDDDLIEAKLHVSYGETYQVITRESAKAAEELDRAAA HHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH YLDKAMKNSLLDQATIKRIGAIRKEVTSLREAPEQSDEAWKDRYDQIKDEINKLLRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRSAFVLLAVLAGYLPFCPAAPAEAVDTPSAGLYRSITQREEGVISRTAVMALRSIVQA CCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADIHQKMLEKARHDLNEATLLMETIRSDLSTAVVRNRIWIARTHLEYETAQRVMEDLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCH IFSALRDIEEYFPTDKAKRHIDNAKRYLEKGEKKGAERELHLADNELVVVEVELPIAKAE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCHHHHH TYVTRAKEYLARNDVTKADEALKVAEEKAQAVPVGMESALQRAQSSFWRASRSYAAGKPA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EARTYIEQARMYLEKAAKTGNVKGKEEVGTLSRSVTELEQKLDKGDNTAESALASAWNKS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RALAERESEYLAARWEEAETTLSVDDDLIEAKLHVSYGETYQVITRESAKAAEELDRAAA HHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH YLDKAMKNSLLDQATIKRIGAIRKEVTSLREAPEQSDEAWKDRYDQIKDEINKLLRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA