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The map label for this gene is yhbA [H]

Identifier: 78222219

GI number: 78222219

Start: 1112645

End: 1113679

Strand: Reverse

Name: yhbA [H]

Synonym: Gmet_0999

Alternate gene names: 78222219

Gene position: 1113679-1112645 (Counterclockwise)

Preceding gene: 78222220

Following gene: 78222215

Centisome position: 27.86

GC content: 59.13

Gene sequence:

>1035_bases
ATGAGTACTGACAATCTTGCGCTAAACATCAGAGAGAAGGCGATGGAGGCCGGTTTCGACCACTGCGGGATCGTGAAAAT
AGATGCCTTAGCGGACTATGTCTCGCGGCTCGAAGAGCGTGCGGCTGCATTTCCCCGATCGAAGCCTTTTTACGACTTCC
TTTCCAAGCTCGGGACACCGCAGGCAGCTCACGAGTGGGGAAAGTCGGTCATCGTCTGCGCCATGCGGTACGGGAAGTAC
CGGATTCCGAACCGGGCGGATAGGCACATCGGCAAGCTCTACCTGTACGGAGGATACAGGCAGCCCGCTTATTCCCAGGA
ATATGCGGGCATGGCCGGGTTCGAGGCATTTCTCGCTGCGGAAGGGATAAGGTTCGCAAAAGACGTTTTCGGGATCGCCC
CGGCGCGGCTTTGCGCAGCACAGGCGAATTTGGGGGTGATCCGGAACAATAACTTCCTCTACACCGAGCACGGCTCGTGG
GTGTGGCTGGAAACGTGGCTCATCGACAGGGAACTGGAATACCGGGAGAGCCCGAATACGCTTCCGTCCTGTCCGCCCGG
CTGTTCCAAATGCATTGACGCCTGTCCCACCGGTGCGCTGAAGGCGCCGTTTCTGACAGACATGGGTACGTGCATCGCCC
GGCTCACCTACAGCCCGTCCGGCGAAGCCCCCGAGCCTCTGCGGGAAAGCATGGGCACCTGGCTGTACGGCTGCGACGAG
TGCCAGAATGCATGCCCCATGAACAAGGGAAGATGGGAGGAAAAGGAGGAGTACCCGCGGCTGGAGGAACTGTCACGGCA
CATTTCCCTCGAGAAGATTGCGGAGATGGACGAACATGCCGTTTCAGACATCCTGTCGCCCATGTTCTGGATCATCGGCA
AGGAGAAGCTGTGGATGTGGAAATGCAACGTCATACGGGCCATGGTGAATGGCAAGGATCCCGGACACCACTCCACCATT
CGGAAGCTGTGCGATGACGGTAACGAGAACGTACGGCGGACGGCGGAGTGGGCGTGCCGCCAGCTCGGCATCTGA

Upstream 100 bases:

>100_bases
ATAAACCACACGCGAAAAAGCCGCCCGAACAGGTCAACAGCCGTCGTACTGAAGAATTGGGGACCGGGCAGTAGACCATT
CTCATTTCCGGAGATTACAC

Downstream 100 bases:

>100_bases
CGCCTAAGTAACTGGTCCTCCCAAAACCTACCCCGCCCTCTTCTCAAGCCCCCAGCGGATTCGGATCCGCTGCTCGATGA
TCCCGAAGAAAAACCGGTCA

Product: 4Fe-4S ferredoxin, iron-sulfur binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSTDNLALNIREKAMEAGFDHCGIVKIDALADYVSRLEERAAAFPRSKPFYDFLSKLGTPQAAHEWGKSVIVCAMRYGKY
RIPNRADRHIGKLYLYGGYRQPAYSQEYAGMAGFEAFLAAEGIRFAKDVFGIAPARLCAAQANLGVIRNNNFLYTEHGSW
VWLETWLIDRELEYRESPNTLPSCPPGCSKCIDACPTGALKAPFLTDMGTCIARLTYSPSGEAPEPLRESMGTWLYGCDE
CQNACPMNKGRWEEKEEYPRLEELSRHISLEKIAEMDEHAVSDILSPMFWIIGKEKLWMWKCNVIRAMVNGKDPGHHSTI
RKLCDDGNENVRRTAEWACRQLGI

Sequences:

>Translated_344_residues
MSTDNLALNIREKAMEAGFDHCGIVKIDALADYVSRLEERAAAFPRSKPFYDFLSKLGTPQAAHEWGKSVIVCAMRYGKY
RIPNRADRHIGKLYLYGGYRQPAYSQEYAGMAGFEAFLAAEGIRFAKDVFGIAPARLCAAQANLGVIRNNNFLYTEHGSW
VWLETWLIDRELEYRESPNTLPSCPPGCSKCIDACPTGALKAPFLTDMGTCIARLTYSPSGEAPEPLRESMGTWLYGCDE
CQNACPMNKGRWEEKEEYPRLEELSRHISLEKIAEMDEHAVSDILSPMFWIIGKEKLWMWKCNVIRAMVNGKDPGHHSTI
RKLCDDGNENVRRTAEWACRQLGI
>Mature_343_residues
STDNLALNIREKAMEAGFDHCGIVKIDALADYVSRLEERAAAFPRSKPFYDFLSKLGTPQAAHEWGKSVIVCAMRYGKYR
IPNRADRHIGKLYLYGGYRQPAYSQEYAGMAGFEAFLAAEGIRFAKDVFGIAPARLCAAQANLGVIRNNNFLYTEHGSWV
WLETWLIDRELEYRESPNTLPSCPPGCSKCIDACPTGALKAPFLTDMGTCIARLTYSPSGEAPEPLRESMGTWLYGCDEC
QNACPMNKGRWEEKEEYPRLEELSRHISLEKIAEMDEHAVSDILSPMFWIIGKEKLWMWKCNVIRAMVNGKDPGHHSTIR
KLCDDGNENVRRTAEWACRQLGI

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=118, Percent_Identity=38.9830508474576, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 38895; Mature: 38764

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDNLALNIREKAMEAGFDHCGIVKIDALADYVSRLEERAAAFPRSKPFYDFLSKLGTP
CCCCCEEEHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
QAAHEWGKSVIVCAMRYGKYRIPNRADRHIGKLYLYGGYRQPAYSQEYAGMAGFEAFLAA
HHHHHHCCHHEEHHHHHCCCCCCCHHHHHHCEEEEECCCCCCCCCHHHCCHHHHHHHHHH
EGIRFAKDVFGIAPARLCAAQANLGVIRNNNFLYTEHGSWVWLETWLIDRELEYRESPNT
HHHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEEEECCHHHHCCCCCC
LPSCPPGCSKCIDACPTGALKAPFLTDMGTCIARLTYSPSGEAPEPLRESMGTWLYGCDE
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCHH
CQNACPMNKGRWEEKEEYPRLEELSRHISLEKIAEMDEHAVSDILSPMFWIIGKEKLWMW
HHCCCCCCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KCNVIRAMVNGKDPGHHSTIRKLCDDGNENVRRTAEWACRQLGI
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STDNLALNIREKAMEAGFDHCGIVKIDALADYVSRLEERAAAFPRSKPFYDFLSKLGTP
CCCCEEEHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
QAAHEWGKSVIVCAMRYGKYRIPNRADRHIGKLYLYGGYRQPAYSQEYAGMAGFEAFLAA
HHHHHHCCHHEEHHHHHCCCCCCCHHHHHHCEEEEECCCCCCCCCHHHCCHHHHHHHHHH
EGIRFAKDVFGIAPARLCAAQANLGVIRNNNFLYTEHGSWVWLETWLIDRELEYRESPNT
HHHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEEEECCHHHHCCCCCC
LPSCPPGCSKCIDACPTGALKAPFLTDMGTCIARLTYSPSGEAPEPLRESMGTWLYGCDE
CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCHH
CQNACPMNKGRWEEKEEYPRLEELSRHISLEKIAEMDEHAVSDILSPMFWIIGKEKLWMW
HHCCCCCCCCCCCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
KCNVIRAMVNGKDPGHHSTIRKLCDDGNENVRRTAEWACRQLGI
HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]