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The map label for this gene is vacJ [C]

Identifier: 78222215

GI number: 78222215

Start: 1107408

End: 1109651

Strand: Reverse

Name: vacJ [C]

Synonym: Gmet_0995

Alternate gene names: 78222215

Gene position: 1109651-1107408 (Counterclockwise)

Preceding gene: 78222219

Following gene: 78222209

Centisome position: 27.76

GC content: 60.52

Gene sequence:

>2244_bases
ATGATCTTCGAGGGGTTACGCATCCGCGGGGAAGGAAGCCCAATTCCCCCGATCATCGGCGCGCTGCTGGCGCTGGCCAT
CTGCTGCCACACGCTGGTTTCGCCGGTCGGCGCGGCGGAAGAAGTTTACGAATACCCGTTTGCCGATCCGTACGCCGCCA
CCGTGATCGGCACGCCAAAGGAACTGCAGGCCGAAGTGCCGCGGAAAATCCCCTTCAGGGAGCCGGAGGTGACAGTATTC
GAGGACCGGCCGGTTCCCGATATCCTCTGGTACGACAGGAAGCTGCGCTATTCCATTGCCACCCAGCGCCGGCCGGCACC
ACTCATCTTCCTCATTGCCGGCATGGGGGCCGGGCACAACGACCCGAAAATACAGTTCCTGCAGCGGGTATTTTTCAAGG
CGGGATTCCATGTGGTCTGCCTCCCCTCCGCAACCCACCCGAACTTCATTCCCGCTGCATCGGGGAGCGGTATTCCCGGT
TTCCTGATGGAAGACGCCCGGGACCTCTACCGGGCCATGGAGCTGATTACCCGTGATGTCCGTGAAGATGTGACGATCAC
CGGCTTTGATCTGGCCGGATACAGCCTCGGTGCCGATCACGCCGCGTTTCTGGCCGAACTGGACAATCGGCTCAGCCAGT
TCAGGTTCAACAAGGTGCTCCTCATCAATCCGCCGGTGAGCCTCTACCATGCGGCAGGGGTCCTCGACGAGATGATCAAG
AAGATTCCGGGAGGGGAGGAGAAATTCCAGGAATTCTTCGACAATGCCTTCAGGGCCTTTACGGCCATTTACCAGTCGAA
CGAACGGGTCGAATTTACGGGCGATTTCCTCTTCAGGGGCAGAAAGCCCAATGACGAAAACCTGGCAGCCCTGATCGGCC
TTTCATTCCGGCTGGCCGTGGCAAACATGGCCTTCACTTCCGATGTCTTCACCAATGCCGGCTACATCAAGCCGAAAAAC
CTCGAACTCTCCACAACCGACTCCCTGACCGACTATTTCAAGGTGGCGGATCTGGTCAAGTTCCTGGACTATTTCCGGGA
TCTCCTCGCCCCCTACTACCTGGAACAGATTCCGGGGATGACCGAGCGGCAGCTGATCGAACAACTCAGCCTCAGGAGCA
TCGAGCAATTCCTGCGCAATTCCCCGTCGGTCTATCTGGTCCATAACGTCGACGATATGCTCCTGGCGCCGGGAGACATC
GACTATCTGAAGGACGTGTTCGGCTCCCGCGCCAGGATCTACCCCCGGGGCGGCCACTGCGGCAACATCGACCACCGGGT
GAACGTGGCGCACATGCTGGAAATCTTCAGGGGGGAGACAACTGGCGGAAATACGGGCACAACAGCTCCGGATAGTGGCG
AAGCTGCCGGCGCGGGGAGAGAGATGAAGCCCGGTGCCGAGCCGGCGGAGCAGACGCAAACCGCGCTTCCGTCCCAGGAA
GCCGCTCCTCCACTGAGGGATTCCGGCGGACCGCGCAATGAGGCATTTACCGCACCCCGCCCGGCCGTCATTTCCACAGG
AATTTTGAACGGACAGGCAGGGGCGCGAAATCCGAAGCCCTCCGCCACAGGGACGCGGCAAATCATCGCCCCGCGCCGCT
CAGAGGCCAAGCCGGGGCTGTCATACGTCATCGACGTGCATGATCCCATCGAACCGGTGAACCGGGCGCTCTACCGCTTT
AACGCCATGTTTGACGAGTACCTGTTCCTGCCGGTAACCCGGACCTACGAATTCATCACCCCGGTCTTTCTCCAAGACCG
GATCTCCGGCATCTTCGCCAACATCTCGGAGGTCCGCAACCTGACCAATTCGATTCTCCAGTTGCGGCCCAAGACCTCCG
CCACGGTCTTTACCCGGTTCCTCATCAACTCGACGCTCGGCATCGGCGGGATGTGGGACCCCGCCACCGATCTGGGCTTT
CCGAAGCACGAGGAAGATTTCGGCCAGACGCTGGGGTGGTGGGGATTGAAGCAGGGGCCGTATATCGTGCTGCCGATCTT
CGGCCCTTCCAGCCTGCGGGACACGACCGGCCGCGTGGGGGATTCCGCGGCGAGCTATTTCTACCTCTACCAGCCAACGG
ACATGGACCAGAATATCGGCGCGGGATCAGCCTACACGGGCGTGAACGCCATTGATACGCGGCACAACATCCCGTTCCGG
TACTACCAGACCGGCTCCCCCTTCGAGTACGACCTGGTGCGCCTGCTCTACAAGAAGAAACGGGAGCTGGACATAGAGCG
ATAA

Upstream 100 bases:

>100_bases
TCGACTGCCCGGCATTCACGCAGGCGGCTCTTCACGCGCCAAAGGCCAGAGCGCGCAGGGGTGGACCGCAAGGGGGCATA
CGTCACGCAAGGAGGCTGAG

Downstream 100 bases:

>100_bases
TCTCGGAACAACGGAATTCAGGCCAAAAAACAAGCCCCCGACGACAAAGTCGGGGGCTTTATTTACCAGTTCGCAGAATC
AGCCAGCGAGACAAACCACC

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MIFEGLRIRGEGSPIPPIIGALLALAICCHTLVSPVGAAEEVYEYPFADPYAATVIGTPKELQAEVPRKIPFREPEVTVF
EDRPVPDILWYDRKLRYSIATQRRPAPLIFLIAGMGAGHNDPKIQFLQRVFFKAGFHVVCLPSATHPNFIPAASGSGIPG
FLMEDARDLYRAMELITRDVREDVTITGFDLAGYSLGADHAAFLAELDNRLSQFRFNKVLLINPPVSLYHAAGVLDEMIK
KIPGGEEKFQEFFDNAFRAFTAIYQSNERVEFTGDFLFRGRKPNDENLAALIGLSFRLAVANMAFTSDVFTNAGYIKPKN
LELSTTDSLTDYFKVADLVKFLDYFRDLLAPYYLEQIPGMTERQLIEQLSLRSIEQFLRNSPSVYLVHNVDDMLLAPGDI
DYLKDVFGSRARIYPRGGHCGNIDHRVNVAHMLEIFRGETTGGNTGTTAPDSGEAAGAGREMKPGAEPAEQTQTALPSQE
AAPPLRDSGGPRNEAFTAPRPAVISTGILNGQAGARNPKPSATGTRQIIAPRRSEAKPGLSYVIDVHDPIEPVNRALYRF
NAMFDEYLFLPVTRTYEFITPVFLQDRISGIFANISEVRNLTNSILQLRPKTSATVFTRFLINSTLGIGGMWDPATDLGF
PKHEEDFGQTLGWWGLKQGPYIVLPIFGPSSLRDTTGRVGDSAASYFYLYQPTDMDQNIGAGSAYTGVNAIDTRHNIPFR
YYQTGSPFEYDLVRLLYKKKRELDIER

Sequences:

>Translated_747_residues
MIFEGLRIRGEGSPIPPIIGALLALAICCHTLVSPVGAAEEVYEYPFADPYAATVIGTPKELQAEVPRKIPFREPEVTVF
EDRPVPDILWYDRKLRYSIATQRRPAPLIFLIAGMGAGHNDPKIQFLQRVFFKAGFHVVCLPSATHPNFIPAASGSGIPG
FLMEDARDLYRAMELITRDVREDVTITGFDLAGYSLGADHAAFLAELDNRLSQFRFNKVLLINPPVSLYHAAGVLDEMIK
KIPGGEEKFQEFFDNAFRAFTAIYQSNERVEFTGDFLFRGRKPNDENLAALIGLSFRLAVANMAFTSDVFTNAGYIKPKN
LELSTTDSLTDYFKVADLVKFLDYFRDLLAPYYLEQIPGMTERQLIEQLSLRSIEQFLRNSPSVYLVHNVDDMLLAPGDI
DYLKDVFGSRARIYPRGGHCGNIDHRVNVAHMLEIFRGETTGGNTGTTAPDSGEAAGAGREMKPGAEPAEQTQTALPSQE
AAPPLRDSGGPRNEAFTAPRPAVISTGILNGQAGARNPKPSATGTRQIIAPRRSEAKPGLSYVIDVHDPIEPVNRALYRF
NAMFDEYLFLPVTRTYEFITPVFLQDRISGIFANISEVRNLTNSILQLRPKTSATVFTRFLINSTLGIGGMWDPATDLGF
PKHEEDFGQTLGWWGLKQGPYIVLPIFGPSSLRDTTGRVGDSAASYFYLYQPTDMDQNIGAGSAYTGVNAIDTRHNIPFR
YYQTGSPFEYDLVRLLYKKKRELDIER
>Mature_747_residues
MIFEGLRIRGEGSPIPPIIGALLALAICCHTLVSPVGAAEEVYEYPFADPYAATVIGTPKELQAEVPRKIPFREPEVTVF
EDRPVPDILWYDRKLRYSIATQRRPAPLIFLIAGMGAGHNDPKIQFLQRVFFKAGFHVVCLPSATHPNFIPAASGSGIPG
FLMEDARDLYRAMELITRDVREDVTITGFDLAGYSLGADHAAFLAELDNRLSQFRFNKVLLINPPVSLYHAAGVLDEMIK
KIPGGEEKFQEFFDNAFRAFTAIYQSNERVEFTGDFLFRGRKPNDENLAALIGLSFRLAVANMAFTSDVFTNAGYIKPKN
LELSTTDSLTDYFKVADLVKFLDYFRDLLAPYYLEQIPGMTERQLIEQLSLRSIEQFLRNSPSVYLVHNVDDMLLAPGDI
DYLKDVFGSRARIYPRGGHCGNIDHRVNVAHMLEIFRGETTGGNTGTTAPDSGEAAGAGREMKPGAEPAEQTQTALPSQE
AAPPLRDSGGPRNEAFTAPRPAVISTGILNGQAGARNPKPSATGTRQIIAPRRSEAKPGLSYVIDVHDPIEPVNRALYRF
NAMFDEYLFLPVTRTYEFITPVFLQDRISGIFANISEVRNLTNSILQLRPKTSATVFTRFLINSTLGIGGMWDPATDLGF
PKHEEDFGQTLGWWGLKQGPYIVLPIFGPSSLRDTTGRVGDSAASYFYLYQPTDMDQNIGAGSAYTGVNAIDTRHNIPFR
YYQTGSPFEYDLVRLLYKKKRELDIER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=139, Percent_Identity=35.9712230215827, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 83092; Mature: 83092

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFEGLRIRGEGSPIPPIIGALLALAICCHTLVSPVGAAEEVYEYPFADPYAATVIGTPK
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCH
ELQAEVPRKIPFREPEVTVFEDRPVPDILWYDRKLRYSIATQRRPAPLIFLIAGMGAGHN
HHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCHHEEHHHCCCCCCCEEEEEECCCCCCC
DPKIQFLQRVFFKAGFHVVCLPSATHPNFIPAASGSGIPGFLMEDARDLYRAMELITRDV
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
REDVTITGFDLAGYSLGADHAAFLAELDNRLSQFRFNKVLLINPPVSLYHAAGVLDEMIK
HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
KIPGGEEKFQEFFDNAFRAFTAIYQSNERVEFTGDFLFRGRKPNDENLAALIGLSFRLAV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
ANMAFTSDVFTNAGYIKPKNLELSTTDSLTDYFKVADLVKFLDYFRDLLAPYYLEQIPGM
HHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TERQLIEQLSLRSIEQFLRNSPSVYLVHNVDDMLLAPGDIDYLKDVFGSRARIYPRGGHC
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHCCCEEEEECCCCC
GNIDHRVNVAHMLEIFRGETTGGNTGTTAPDSGEAAGAGREMKPGAEPAEQTQTALPSQE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
AAPPLRDSGGPRNEAFTAPRPAVISTGILNGQAGARNPKPSATGTRQIIAPRRSEAKPGL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
SYVIDVHDPIEPVNRALYRFNAMFDEYLFLPVTRTYEFITPVFLQDRISGIFANISEVRN
EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNSILQLRPKTSATVFTRFLINSTLGIGGMWDPATDLGFPKHEEDFGQTLGWWGLKQGP
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCC
YIVLPIFGPSSLRDTTGRVGDSAASYFYLYQPTDMDQNIGAGSAYTGVNAIDTRHNIPFR
EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YYQTGSPFEYDLVRLLYKKKRELDIER
EEECCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIFEGLRIRGEGSPIPPIIGALLALAICCHTLVSPVGAAEEVYEYPFADPYAATVIGTPK
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCH
ELQAEVPRKIPFREPEVTVFEDRPVPDILWYDRKLRYSIATQRRPAPLIFLIAGMGAGHN
HHHHHCCCCCCCCCCCEEEECCCCCCHHHHCCCHHEEHHHCCCCCCCEEEEEECCCCCCC
DPKIQFLQRVFFKAGFHVVCLPSATHPNFIPAASGSGIPGFLMEDARDLYRAMELITRDV
CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
REDVTITGFDLAGYSLGADHAAFLAELDNRLSQFRFNKVLLINPPVSLYHAAGVLDEMIK
HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
KIPGGEEKFQEFFDNAFRAFTAIYQSNERVEFTGDFLFRGRKPNDENLAALIGLSFRLAV
HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHH
ANMAFTSDVFTNAGYIKPKNLELSTTDSLTDYFKVADLVKFLDYFRDLLAPYYLEQIPGM
HHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TERQLIEQLSLRSIEQFLRNSPSVYLVHNVDDMLLAPGDIDYLKDVFGSRARIYPRGGHC
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCHHHHHHHHCCCEEEEECCCCC
GNIDHRVNVAHMLEIFRGETTGGNTGTTAPDSGEAAGAGREMKPGAEPAEQTQTALPSQE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
AAPPLRDSGGPRNEAFTAPRPAVISTGILNGQAGARNPKPSATGTRQIIAPRRSEAKPGL
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
SYVIDVHDPIEPVNRALYRFNAMFDEYLFLPVTRTYEFITPVFLQDRISGIFANISEVRN
EEEEECCCCHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNSILQLRPKTSATVFTRFLINSTLGIGGMWDPATDLGFPKHEEDFGQTLGWWGLKQGP
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCC
YIVLPIFGPSSLRDTTGRVGDSAASYFYLYQPTDMDQNIGAGSAYTGVNAIDTRHNIPFR
EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
YYQTGSPFEYDLVRLLYKKKRELDIER
EEECCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA